co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0030155: regulation of cell adhesion	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0080127: fruit septum development	0.00E+00
6	GO:0015717: triose phosphate transport	0.00E+00
7	GO:1905177: tracheary element differentiation	0.00E+00
8	GO:0071474: cellular hyperosmotic response	0.00E+00
9	GO:0009773: photosynthetic electron transport in photosystem I	8.16E-08
10	GO:0015979: photosynthesis	9.57E-08
11	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.13E-06
12	GO:0006000: fructose metabolic process	4.23E-06
13	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.86E-06
14	GO:0061077: chaperone-mediated protein folding	3.40E-05
15	GO:0006002: fructose 6-phosphate metabolic process	1.36E-04
16	GO:0032544: plastid translation	1.36E-04
17	GO:0009735: response to cytokinin	1.37E-04
18	GO:0000025: maltose catabolic process	1.52E-04
19	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.52E-04
20	GO:0005980: glycogen catabolic process	1.52E-04
21	GO:0010480: microsporocyte differentiation	1.52E-04
22	GO:0010028: xanthophyll cycle	1.52E-04
23	GO:0005983: starch catabolic process	3.17E-04
24	GO:0031648: protein destabilization	3.47E-04
25	GO:0016122: xanthophyll metabolic process	3.47E-04
26	GO:0051262: protein tetramerization	3.47E-04
27	GO:0006094: gluconeogenesis	3.61E-04
28	GO:0005986: sucrose biosynthetic process	3.61E-04
29	GO:0048281: inflorescence morphogenesis	5.68E-04
30	GO:0010623: programmed cell death involved in cell development	5.68E-04
31	GO:0080055: low-affinity nitrate transport	5.68E-04
32	GO:0035436: triose phosphate transmembrane transport	5.68E-04
33	GO:0010148: transpiration	8.13E-04
34	GO:0010306: rhamnogalacturonan II biosynthetic process	8.13E-04
35	GO:0010731: protein glutathionylation	8.13E-04
36	GO:0019464: glycine decarboxylation via glycine cleavage system	1.08E-03
37	GO:0006109: regulation of carbohydrate metabolic process	1.08E-03
38	GO:0015994: chlorophyll metabolic process	1.08E-03
39	GO:0010600: regulation of auxin biosynthetic process	1.08E-03
40	GO:0006552: leucine catabolic process	1.08E-03
41	GO:0010508: positive regulation of autophagy	1.08E-03
42	GO:0015713: phosphoglycerate transport	1.08E-03
43	GO:0006546: glycine catabolic process	1.08E-03
44	GO:0010021: amylopectin biosynthetic process	1.08E-03
45	GO:0010023: proanthocyanidin biosynthetic process	1.08E-03
46	GO:0009409: response to cold	1.35E-03
47	GO:0006461: protein complex assembly	1.36E-03
48	GO:0000470: maturation of LSU-rRNA	1.67E-03
49	GO:0003006: developmental process involved in reproduction	1.67E-03
50	GO:0009643: photosynthetic acclimation	1.67E-03
51	GO:0009955: adaxial/abaxial pattern specification	2.01E-03
52	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.01E-03
53	GO:0042026: protein refolding	2.01E-03
54	GO:1901259: chloroplast rRNA processing	2.01E-03
55	GO:0006458: 'de novo' protein folding	2.01E-03
56	GO:0015995: chlorophyll biosynthetic process	2.26E-03
57	GO:0048437: floral organ development	2.36E-03
58	GO:0070370: cellular heat acclimation	2.36E-03
59	GO:0022904: respiratory electron transport chain	2.36E-03
60	GO:0010103: stomatal complex morphogenesis	2.36E-03
61	GO:0010161: red light signaling pathway	2.36E-03
62	GO:0010928: regulation of auxin mediated signaling pathway	2.73E-03
63	GO:0005978: glycogen biosynthetic process	2.73E-03
64	GO:0006353: DNA-templated transcription, termination	2.73E-03
65	GO:0009704: de-etiolation	2.73E-03
66	GO:0009657: plastid organization	3.12E-03
67	GO:0001558: regulation of cell growth	3.12E-03
68	GO:0048507: meristem development	3.53E-03
69	GO:0051865: protein autoubiquitination	3.53E-03
70	GO:0006783: heme biosynthetic process	3.53E-03
71	GO:0042761: very long-chain fatty acid biosynthetic process	3.96E-03
72	GO:0005982: starch metabolic process	3.96E-03
73	GO:0006782: protoporphyrinogen IX biosynthetic process	4.40E-03
74	GO:0048829: root cap development	4.40E-03
75	GO:0043085: positive regulation of catalytic activity	4.86E-03
76	GO:0009750: response to fructose	4.86E-03
77	GO:0048229: gametophyte development	4.86E-03
78	GO:0010015: root morphogenesis	4.86E-03
79	GO:0010582: floral meristem determinacy	5.34E-03
80	GO:0006810: transport	5.76E-03
81	GO:0006006: glucose metabolic process	5.83E-03
82	GO:0009718: anthocyanin-containing compound biosynthetic process	5.83E-03
83	GO:0010075: regulation of meristem growth	5.83E-03
84	GO:0048467: gynoecium development	6.33E-03
85	GO:0019253: reductive pentose-phosphate cycle	6.33E-03
86	GO:0009266: response to temperature stimulus	6.33E-03
87	GO:0009934: regulation of meristem structural organization	6.33E-03
88	GO:0006302: double-strand break repair	6.33E-03
89	GO:0043086: negative regulation of catalytic activity	6.45E-03
90	GO:0006412: translation	6.76E-03
91	GO:0005985: sucrose metabolic process	6.86E-03
92	GO:0010025: wax biosynthetic process	7.40E-03
93	GO:0009944: polarity specification of adaxial/abaxial axis	7.95E-03
94	GO:0006289: nucleotide-excision repair	7.95E-03
95	GO:0007017: microtubule-based process	8.51E-03
96	GO:0051302: regulation of cell division	8.51E-03
97	GO:0019915: lipid storage	9.10E-03
98	GO:0051321: meiotic cell cycle	9.10E-03
99	GO:0003333: amino acid transmembrane transport	9.10E-03
100	GO:0030245: cellulose catabolic process	9.69E-03
101	GO:0010017: red or far-red light signaling pathway	9.69E-03
102	GO:0035428: hexose transmembrane transport	9.69E-03
103	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.69E-03
104	GO:0019748: secondary metabolic process	9.69E-03
105	GO:0009686: gibberellin biosynthetic process	1.03E-02
106	GO:0001944: vasculature development	1.03E-02
107	GO:0006284: base-excision repair	1.09E-02
108	GO:0010089: xylem development	1.09E-02
109	GO:0048653: anther development	1.22E-02
110	GO:0042335: cuticle development	1.22E-02
111	GO:0006662: glycerol ether metabolic process	1.29E-02
112	GO:0048868: pollen tube development	1.29E-02
113	GO:0046323: glucose import	1.29E-02
114	GO:0045490: pectin catabolic process	1.34E-02
115	GO:0009646: response to absence of light	1.36E-02
116	GO:0019252: starch biosynthetic process	1.42E-02
117	GO:1901657: glycosyl compound metabolic process	1.64E-02
118	GO:0009607: response to biotic stimulus	2.02E-02
119	GO:0009658: chloroplast organization	2.09E-02
120	GO:0009627: systemic acquired resistance	2.10E-02
121	GO:0046686: response to cadmium ion	2.18E-02
122	GO:0006970: response to osmotic stress	2.25E-02
123	GO:0016311: dephosphorylation	2.26E-02
124	GO:0009817: defense response to fungus, incompatible interaction	2.34E-02
125	GO:0006499: N-terminal protein myristoylation	2.51E-02
126	GO:0080167: response to karrikin	2.59E-02
127	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.68E-02
128	GO:0006865: amino acid transport	2.69E-02
129	GO:0034599: cellular response to oxidative stress	2.86E-02
130	GO:0045454: cell redox homeostasis	3.10E-02
131	GO:0006631: fatty acid metabolic process	3.14E-02
132	GO:0006869: lipid transport	3.39E-02
133	GO:0009644: response to high light intensity	3.52E-02
134	GO:0009965: leaf morphogenesis	3.61E-02
135	GO:0032259: methylation	3.65E-02
136	GO:0006855: drug transmembrane transport	3.71E-02
137	GO:0009414: response to water deprivation	3.91E-02
138	GO:0009664: plant-type cell wall organization	3.91E-02
139	GO:0042742: defense response to bacterium	4.03E-02
140	GO:0009585: red, far-red light phototransduction	4.11E-02
141	GO:0051603: proteolysis involved in cellular protein catabolic process	4.21E-02
142	GO:0006857: oligopeptide transport	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
3	GO:0048039: ubiquinone binding	0.00E+00
4	GO:0009899: ent-kaurene synthase activity	0.00E+00
5	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
6	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.13E-06
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.84E-05
8	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.52E-04
9	GO:0005227: calcium activated cation channel activity	1.52E-04
10	GO:0008184: glycogen phosphorylase activity	1.52E-04
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.52E-04
12	GO:0004853: uroporphyrinogen decarboxylase activity	1.52E-04
13	GO:0004134: 4-alpha-glucanotransferase activity	1.52E-04
14	GO:0004645: phosphorylase activity	1.52E-04
15	GO:0019843: rRNA binding	1.94E-04
16	GO:0044183: protein binding involved in protein folding	2.75E-04
17	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.47E-04
18	GO:0018708: thiol S-methyltransferase activity	3.47E-04
19	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.47E-04
20	GO:0016868: intramolecular transferase activity, phosphotransferases	3.47E-04
21	GO:0005528: FK506 binding	5.64E-04
22	GO:0004857: enzyme inhibitor activity	5.64E-04
23	GO:0043169: cation binding	5.68E-04
24	GO:0045174: glutathione dehydrogenase (ascorbate) activity	5.68E-04
25	GO:0071917: triose-phosphate transmembrane transporter activity	5.68E-04
26	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.68E-04
27	GO:0030570: pectate lyase activity	8.07E-04
28	GO:0004375: glycine dehydrogenase (decarboxylating) activity	8.13E-04
29	GO:0016851: magnesium chelatase activity	8.13E-04
30	GO:0043023: ribosomal large subunit binding	8.13E-04
31	GO:0010328: auxin influx transmembrane transporter activity	1.08E-03
32	GO:0019199: transmembrane receptor protein kinase activity	1.08E-03
33	GO:0042277: peptide binding	1.08E-03
34	GO:0015120: phosphoglycerate transmembrane transporter activity	1.08E-03
35	GO:0048038: quinone binding	1.34E-03
36	GO:0008725: DNA-3-methyladenine glycosylase activity	1.36E-03
37	GO:0005261: cation channel activity	2.01E-03
38	GO:0051920: peroxiredoxin activity	2.01E-03
39	GO:0005337: nucleoside transmembrane transporter activity	2.73E-03
40	GO:0016209: antioxidant activity	2.73E-03
41	GO:0003735: structural constituent of ribosome	2.90E-03
42	GO:0004185: serine-type carboxypeptidase activity	4.05E-03
43	GO:0043621: protein self-association	4.38E-03
44	GO:0008047: enzyme activator activity	4.40E-03
45	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.72E-03
46	GO:0004565: beta-galactosidase activity	5.83E-03
47	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.65E-03
48	GO:0009055: electron carrier activity	8.81E-03
49	GO:0033612: receptor serine/threonine kinase binding	9.10E-03
50	GO:0008408: 3'-5' exonuclease activity	9.10E-03
51	GO:0008810: cellulase activity	1.03E-02
52	GO:0022891: substrate-specific transmembrane transporter activity	1.03E-02
53	GO:0016829: lyase activity	1.05E-02
54	GO:0047134: protein-disulfide reductase activity	1.16E-02
55	GO:0001085: RNA polymerase II transcription factor binding	1.29E-02
56	GO:0005355: glucose transmembrane transporter activity	1.36E-02
57	GO:0004791: thioredoxin-disulfide reductase activity	1.36E-02
58	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.64E-02
59	GO:0005200: structural constituent of cytoskeleton	1.79E-02
60	GO:0008168: methyltransferase activity	2.01E-02
61	GO:0102483: scopolin beta-glucosidase activity	2.18E-02
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.37E-02
63	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.60E-02
64	GO:0030145: manganese ion binding	2.60E-02
65	GO:0008422: beta-glucosidase activity	2.95E-02
66	GO:0051539: 4 iron, 4 sulfur cluster binding	3.05E-02
67	GO:0004364: glutathione transferase activity	3.23E-02
68	GO:0051537: 2 iron, 2 sulfur cluster binding	3.52E-02
69	GO:0015293: symporter activity	3.61E-02
70	GO:0003924: GTPase activity	3.81E-02
71	GO:0015171: amino acid transmembrane transporter activity	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
3	GO:0009507: chloroplast	7.68E-18
4	GO:0009570: chloroplast stroma	3.55E-16
5	GO:0009534: chloroplast thylakoid	6.61E-16
6	GO:0009535: chloroplast thylakoid membrane	5.08E-15
7	GO:0009941: chloroplast envelope	3.06E-10
8	GO:0009579: thylakoid	2.95E-08
9	GO:0030095: chloroplast photosystem II	2.11E-07
10	GO:0009543: chloroplast thylakoid lumen	8.32E-07
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.02E-06
12	GO:0009538: photosystem I reaction center	1.08E-04
13	GO:0009501: amyloplast	1.08E-04
14	GO:0010319: stromule	1.48E-04
15	GO:0000791: euchromatin	1.52E-04
16	GO:0030093: chloroplast photosystem I	3.47E-04
17	GO:0030870: Mre11 complex	3.47E-04
18	GO:0031977: thylakoid lumen	4.33E-04
19	GO:0010007: magnesium chelatase complex	5.68E-04
20	GO:0009654: photosystem II oxygen evolving complex	6.20E-04
21	GO:0005960: glycine cleavage complex	8.13E-04
22	GO:0005840: ribosome	8.20E-04
23	GO:0019898: extrinsic component of membrane	1.25E-03
24	GO:0000795: synaptonemal complex	1.36E-03
25	GO:0009295: nucleoid	1.71E-03
26	GO:0009533: chloroplast stromal thylakoid	2.36E-03
27	GO:0031305: integral component of mitochondrial inner membrane	2.73E-03
28	GO:0045298: tubulin complex	3.53E-03
29	GO:0005763: mitochondrial small ribosomal subunit	3.53E-03
30	GO:0005740: mitochondrial envelope	4.40E-03
31	GO:0009508: plastid chromosome	5.83E-03
32	GO:0042651: thylakoid membrane	8.51E-03
33	GO:0010287: plastoglobule	9.21E-03
34	GO:0048046: apoplast	9.43E-03
35	GO:0009523: photosystem II	1.42E-02
36	GO:0000785: chromatin	1.57E-02
37	GO:0005667: transcription factor complex	2.10E-02
38	GO:0015934: large ribosomal subunit	2.60E-02
39	GO:0005834: heterotrimeric G-protein complex	4.84E-02