co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G26990

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	9.67E-07
2	GO:0006511: ubiquitin-dependent protein catabolic process	1.98E-06
3	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	1.48E-05
4	GO:0006434: seryl-tRNA aminoacylation	1.48E-05
5	GO:0030433: ubiquitin-dependent ERAD pathway	2.99E-05
6	GO:0045859: regulation of protein kinase activity	3.88E-05
7	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	3.88E-05
8	GO:0006435: threonyl-tRNA aminoacylation	3.88E-05
9	GO:0030163: protein catabolic process	7.19E-05
10	GO:0001731: formation of translation preinitiation complex	2.34E-04
11	GO:0042176: regulation of protein catabolic process	2.34E-04
12	GO:0000245: spliceosomal complex assembly	2.82E-04
13	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.84E-04
14	GO:0043562: cellular response to nitrogen levels	4.37E-04
15	GO:0045036: protein targeting to chloroplast	6.08E-04
16	GO:0006413: translational initiation	6.53E-04
17	GO:0006446: regulation of translational initiation	8.55E-04
18	GO:0000027: ribosomal large subunit assembly	1.05E-03
19	GO:0015031: protein transport	1.18E-03
20	GO:0006366: transcription from RNA polymerase II promoter	1.19E-03
21	GO:0015992: proton transport	1.19E-03
22	GO:0008033: tRNA processing	1.57E-03
23	GO:0015991: ATP hydrolysis coupled proton transport	1.57E-03
24	GO:0008360: regulation of cell shape	1.65E-03
25	GO:0016579: protein deubiquitination	2.33E-03
26	GO:0042128: nitrate assimilation	2.61E-03
27	GO:0048573: photoperiodism, flowering	2.70E-03
28	GO:0009744: response to sucrose	4.04E-03
29	GO:0009809: lignin biosynthetic process	4.95E-03
30	GO:0009553: embryo sac development	6.18E-03
31	GO:0018105: peptidyl-serine phosphorylation	6.44E-03
32	GO:0006633: fatty acid biosynthetic process	8.64E-03
33	GO:0010228: vegetative to reproductive phase transition of meristem	9.53E-03
34	GO:0046686: response to cadmium ion	1.04E-02

Rank	GO Term	Adjusted P value
1	GO:0036402: proteasome-activating ATPase activity	9.67E-07
2	GO:0016817: hydrolase activity, acting on acid anhydrides	1.48E-05
3	GO:0004828: serine-tRNA ligase activity	1.48E-05
4	GO:0004679: AMP-activated protein kinase activity	1.48E-05
5	GO:0017025: TBP-class protein binding	1.61E-05
6	GO:0004829: threonine-tRNA ligase activity	3.88E-05
7	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	3.88E-05
8	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	3.88E-05
9	GO:0035241: protein-arginine omega-N monomethyltransferase activity	3.88E-05
10	GO:0008469: histone-arginine N-methyltransferase activity	6.95E-05
11	GO:0004888: transmembrane signaling receptor activity	1.88E-04
12	GO:0004040: amidase activity	1.88E-04
13	GO:0031369: translation initiation factor binding	2.34E-04
14	GO:0019887: protein kinase regulator activity	2.82E-04
15	GO:0004656: procollagen-proline 4-dioxygenase activity	2.82E-04
16	GO:0052747: sinapyl alcohol dehydrogenase activity	3.84E-04
17	GO:0015078: hydrogen ion transmembrane transporter activity	4.37E-04
18	GO:0030234: enzyme regulator activity	6.08E-04
19	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.67E-04
20	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.29E-04
21	GO:0003743: translation initiation factor activity	8.09E-04
22	GO:0031418: L-ascorbic acid binding	1.05E-03
23	GO:0001046: core promoter sequence-specific DNA binding	1.05E-03
24	GO:0004298: threonine-type endopeptidase activity	1.19E-03
25	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.19E-03
26	GO:0008233: peptidase activity	1.27E-03
27	GO:0010181: FMN binding	1.73E-03
28	GO:0016887: ATPase activity	2.89E-03
29	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.20E-03
30	GO:0000166: nucleotide binding	3.31E-03
31	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.40E-03
32	GO:0051539: 4 iron, 4 sulfur cluster binding	3.71E-03
33	GO:0016829: lyase activity	7.79E-03
34	GO:0005524: ATP binding	9.57E-03
35	GO:0008168: methyltransferase activity	1.22E-02
36	GO:0008270: zinc ion binding	1.43E-02
37	GO:0005525: GTP binding	4.14E-02
38	GO:0005506: iron ion binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	9.40E-10
2	GO:0008540: proteasome regulatory particle, base subcomplex	1.76E-08
3	GO:0005829: cytosol	1.28E-07
4	GO:0031597: cytosolic proteasome complex	1.43E-06
5	GO:0031595: nuclear proteasome complex	2.01E-06
6	GO:0005852: eukaryotic translation initiation factor 3 complex	8.48E-06
7	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.45E-04
8	GO:0000813: ESCRT I complex	1.88E-04
9	GO:0016282: eukaryotic 43S preinitiation complex	2.34E-04
10	GO:0033290: eukaryotic 48S preinitiation complex	2.82E-04
11	GO:0031359: integral component of chloroplast outer membrane	3.32E-04
12	GO:0019773: proteasome core complex, alpha-subunit complex	4.37E-04
13	GO:0008541: proteasome regulatory particle, lid subcomplex	6.67E-04
14	GO:0005634: nucleus	9.24E-04
15	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.15E-03
16	GO:0005839: proteasome core complex	1.19E-03
17	GO:0016592: mediator complex	1.98E-03
18	GO:0009707: chloroplast outer membrane	2.90E-03
19	GO:0005737: cytoplasm	4.02E-03
20	GO:0005840: ribosome	6.98E-03
21	GO:0009536: plastid	8.17E-03
22	GO:0022627: cytosolic small ribosomal subunit	1.12E-02
23	GO:0009506: plasmodesma	2.27E-02
24	GO:0005618: cell wall	2.65E-02