co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G25540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0010025: wax biosynthetic process	3.24E-10
4	GO:0000038: very long-chain fatty acid metabolic process	1.46E-06
5	GO:0030244: cellulose biosynthetic process	2.07E-06
6	GO:0006633: fatty acid biosynthetic process	2.87E-06
7	GO:0042335: cuticle development	1.56E-05
8	GO:0045926: negative regulation of growth	2.12E-05
9	GO:0009610: response to symbiotic fungus	2.90E-05
10	GO:0009409: response to cold	2.95E-05
11	GO:0009609: response to symbiotic bacterium	7.75E-05
12	GO:0080051: cutin transport	7.75E-05
13	GO:0030148: sphingolipid biosynthetic process	1.04E-04
14	GO:0010143: cutin biosynthetic process	1.60E-04
15	GO:0010289: homogalacturonan biosynthetic process	1.85E-04
16	GO:0015908: fatty acid transport	1.85E-04
17	GO:0043255: regulation of carbohydrate biosynthetic process	1.85E-04
18	GO:1901679: nucleotide transmembrane transport	1.85E-04
19	GO:0010353: response to trehalose	1.85E-04
20	GO:0042538: hyperosmotic salinity response	1.95E-04
21	GO:0009833: plant-type primary cell wall biogenesis	2.04E-04
22	GO:0080121: AMP transport	3.11E-04
23	GO:0051211: anisotropic cell growth	3.11E-04
24	GO:0042545: cell wall modification	3.30E-04
25	GO:0070417: cellular response to cold	3.92E-04
26	GO:0006424: glutamyl-tRNA aminoacylation	4.49E-04
27	GO:0000302: response to reactive oxygen species	5.60E-04
28	GO:0071555: cell wall organization	5.81E-04
29	GO:0006552: leucine catabolic process	5.98E-04
30	GO:0015867: ATP transport	5.98E-04
31	GO:0010222: stem vascular tissue pattern formation	5.98E-04
32	GO:0045490: pectin catabolic process	6.88E-04
33	GO:0009435: NAD biosynthetic process	7.57E-04
34	GO:0006665: sphingolipid metabolic process	7.57E-04
35	GO:0032543: mitochondrial translation	7.57E-04
36	GO:0035435: phosphate ion transmembrane transport	9.24E-04
37	GO:0009913: epidermal cell differentiation	9.24E-04
38	GO:0006574: valine catabolic process	9.24E-04
39	GO:0015866: ADP transport	9.24E-04
40	GO:0009416: response to light stimulus	9.55E-04
41	GO:0009082: branched-chain amino acid biosynthetic process	1.10E-03
42	GO:0098655: cation transmembrane transport	1.10E-03
43	GO:0010555: response to mannitol	1.10E-03
44	GO:0009834: plant-type secondary cell wall biogenesis	1.13E-03
45	GO:0009631: cold acclimation	1.18E-03
46	GO:0030497: fatty acid elongation	1.29E-03
47	GO:0050829: defense response to Gram-negative bacterium	1.29E-03
48	GO:1902074: response to salt	1.29E-03
49	GO:0007155: cell adhesion	1.48E-03
50	GO:0008610: lipid biosynthetic process	1.48E-03
51	GO:0009819: drought recovery	1.48E-03
52	GO:0042255: ribosome assembly	1.48E-03
53	GO:0006353: DNA-templated transcription, termination	1.48E-03
54	GO:0006631: fatty acid metabolic process	1.52E-03
55	GO:0009827: plant-type cell wall modification	1.69E-03
56	GO:0098656: anion transmembrane transport	1.91E-03
57	GO:0042761: very long-chain fatty acid biosynthetic process	2.14E-03
58	GO:2000280: regulation of root development	2.14E-03
59	GO:0009737: response to abscisic acid	2.18E-03
60	GO:0006949: syncytium formation	2.37E-03
61	GO:0048367: shoot system development	2.69E-03
62	GO:0005983: starch catabolic process	2.86E-03
63	GO:0016024: CDP-diacylglycerol biosynthetic process	2.86E-03
64	GO:0010588: cotyledon vascular tissue pattern formation	3.12E-03
65	GO:0006807: nitrogen compound metabolic process	3.12E-03
66	GO:0009825: multidimensional cell growth	3.66E-03
67	GO:0070588: calcium ion transmembrane transport	3.66E-03
68	GO:0007017: microtubule-based process	4.52E-03
69	GO:0009269: response to desiccation	4.82E-03
70	GO:0030245: cellulose catabolic process	5.13E-03
71	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.45E-03
72	GO:0001944: vasculature development	5.45E-03
73	GO:0009739: response to gibberellin	6.00E-03
74	GO:0006470: protein dephosphorylation	6.13E-03
75	GO:0042631: cellular response to water deprivation	6.44E-03
76	GO:0000226: microtubule cytoskeleton organization	6.44E-03
77	GO:0045489: pectin biosynthetic process	6.78E-03
78	GO:0009826: unidimensional cell growth	7.99E-03
79	GO:0010583: response to cyclopentenone	8.22E-03
80	GO:0032502: developmental process	8.22E-03
81	GO:0009828: plant-type cell wall loosening	8.97E-03
82	GO:0006904: vesicle docking involved in exocytosis	9.36E-03
83	GO:0009414: response to water deprivation	1.23E-02
84	GO:0010311: lateral root formation	1.27E-02
85	GO:0009832: plant-type cell wall biogenesis	1.27E-02
86	GO:0032259: methylation	1.46E-02
87	GO:0006839: mitochondrial transport	1.59E-02
88	GO:0048364: root development	1.59E-02
89	GO:0009651: response to salt stress	1.72E-02
90	GO:0009640: photomorphogenesis	1.73E-02
91	GO:0010114: response to red light	1.73E-02
92	GO:0009644: response to high light intensity	1.83E-02
93	GO:0009664: plant-type cell wall organization	2.04E-02
94	GO:0009809: lignin biosynthetic process	2.14E-02
95	GO:0005975: carbohydrate metabolic process	2.16E-02
96	GO:0051603: proteolysis involved in cellular protein catabolic process	2.19E-02
97	GO:0006857: oligopeptide transport	2.25E-02
98	GO:0009735: response to cytokinin	2.48E-02
99	GO:0009624: response to nematode	2.75E-02
100	GO:0009611: response to wounding	2.77E-02
101	GO:0009742: brassinosteroid mediated signaling pathway	2.87E-02
102	GO:0055085: transmembrane transport	3.44E-02
103	GO:0006952: defense response	3.62E-02
104	GO:0007623: circadian rhythm	4.06E-02
105	GO:0010150: leaf senescence	4.06E-02
106	GO:0010468: regulation of gene expression	4.60E-02
107	GO:0008380: RNA splicing	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.53E-08
3	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.53E-08
4	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.53E-08
5	GO:0016746: transferase activity, transferring acyl groups	2.49E-05
6	GO:0050521: alpha-glucan, water dikinase activity	7.75E-05
7	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	7.75E-05
8	GO:0031957: very long-chain fatty acid-CoA ligase activity	7.75E-05
9	GO:0015245: fatty acid transporter activity	7.75E-05
10	GO:0017040: ceramidase activity	1.85E-04
11	GO:0045330: aspartyl esterase activity	2.46E-04
12	GO:0070330: aromatase activity	3.11E-04
13	GO:0030599: pectinesterase activity	3.17E-04
14	GO:0016760: cellulose synthase (UDP-forming) activity	3.33E-04
15	GO:0052655: L-valine transaminase activity	4.49E-04
16	GO:0052656: L-isoleucine transaminase activity	4.49E-04
17	GO:0052654: L-leucine transaminase activity	4.49E-04
18	GO:0004084: branched-chain-amino-acid transaminase activity	5.98E-04
19	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	5.98E-04
20	GO:0016759: cellulose synthase activity	6.75E-04
21	GO:0009922: fatty acid elongase activity	7.57E-04
22	GO:0080122: AMP transmembrane transporter activity	7.57E-04
23	GO:0018685: alkane 1-monooxygenase activity	7.57E-04
24	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	7.57E-04
25	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	9.24E-04
26	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	9.24E-04
27	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.24E-04
28	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.80E-04
29	GO:0015217: ADP transmembrane transporter activity	1.10E-03
30	GO:0102391: decanoate--CoA ligase activity	1.10E-03
31	GO:0005347: ATP transmembrane transporter activity	1.10E-03
32	GO:0004467: long-chain fatty acid-CoA ligase activity	1.29E-03
33	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.44E-03
34	GO:0015114: phosphate ion transmembrane transporter activity	3.12E-03
35	GO:0005388: calcium-transporting ATPase activity	3.12E-03
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.38E-03
37	GO:0004707: MAP kinase activity	4.82E-03
38	GO:0008810: cellulase activity	5.45E-03
39	GO:0003727: single-stranded RNA binding	5.77E-03
40	GO:0016791: phosphatase activity	8.97E-03
41	GO:0005200: structural constituent of cytoskeleton	9.36E-03
42	GO:0016413: O-acetyltransferase activity	9.75E-03
43	GO:0046872: metal ion binding	1.01E-02
44	GO:0005096: GTPase activator activity	1.27E-02
45	GO:0004722: protein serine/threonine phosphatase activity	1.35E-02
46	GO:0003993: acid phosphatase activity	1.49E-02
47	GO:0005524: ATP binding	1.68E-02
48	GO:0004185: serine-type carboxypeptidase activity	1.73E-02
49	GO:0043621: protein self-association	1.83E-02
50	GO:0003690: double-stranded DNA binding	2.19E-02
51	GO:0031625: ubiquitin protein ligase binding	2.30E-02
52	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.47E-02
53	GO:0019843: rRNA binding	3.23E-02
54	GO:0016740: transferase activity	3.30E-02
55	GO:0005515: protein binding	3.64E-02
56	GO:0046910: pectinesterase inhibitor activity	3.86E-02
57	GO:0005516: calmodulin binding	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	2.30E-06
2	GO:0005802: trans-Golgi network	5.55E-06
3	GO:0005768: endosome	8.39E-06
4	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	7.75E-05
5	GO:0005783: endoplasmic reticulum	1.25E-04
6	GO:0009506: plasmodesma	2.30E-04
7	GO:0005789: endoplasmic reticulum membrane	2.63E-04
8	GO:0009897: external side of plasma membrane	3.11E-04
9	GO:0005618: cell wall	4.82E-04
10	GO:0005886: plasma membrane	6.66E-04
11	GO:0046658: anchored component of plasma membrane	9.73E-04
12	GO:0016021: integral component of membrane	1.05E-03
13	GO:0005794: Golgi apparatus	1.65E-03
14	GO:0045298: tubulin complex	1.91E-03
15	GO:0009508: plastid chromosome	3.12E-03
16	GO:0005615: extracellular space	6.00E-03
17	GO:0000145: exocyst	8.22E-03
18	GO:0071944: cell periphery	8.59E-03
19	GO:0031225: anchored component of membrane	9.13E-03
20	GO:0009295: nucleoid	9.36E-03
21	GO:0000139: Golgi membrane	1.87E-02
22	GO:0016020: membrane	2.52E-02
23	GO:0005576: extracellular region	3.96E-02
24	GO:0009570: chloroplast stroma	4.60E-02
25	GO:0005622: intracellular	4.79E-02