GO Enrichment Analysis of Co-expressed Genes with
AT2G25460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009268: response to pH | 0.00E+00 |
| 2 | GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process | 7.38E-08 |
| 3 | GO:0009835: fruit ripening | 4.55E-06 |
| 4 | GO:0007229: integrin-mediated signaling pathway | 1.48E-05 |
| 5 | GO:0009693: ethylene biosynthetic process | 3.32E-05 |
| 6 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.00E-04 |
| 7 | GO:0080024: indolebutyric acid metabolic process | 1.05E-04 |
| 8 | GO:0045324: late endosome to vacuole transport | 1.45E-04 |
| 9 | GO:0015867: ATP transport | 1.45E-04 |
| 10 | GO:0030041: actin filament polymerization | 1.88E-04 |
| 11 | GO:0015866: ADP transport | 2.34E-04 |
| 12 | GO:0048317: seed morphogenesis | 2.34E-04 |
| 13 | GO:0071669: plant-type cell wall organization or biogenesis | 3.32E-04 |
| 14 | GO:0009737: response to abscisic acid | 3.36E-04 |
| 15 | GO:0045010: actin nucleation | 3.84E-04 |
| 16 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.84E-04 |
| 17 | GO:0048193: Golgi vesicle transport | 4.37E-04 |
| 18 | GO:0010629: negative regulation of gene expression | 6.08E-04 |
| 19 | GO:0006896: Golgi to vacuole transport | 6.08E-04 |
| 20 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 7.29E-04 |
| 21 | GO:0018107: peptidyl-threonine phosphorylation | 7.91E-04 |
| 22 | GO:0090351: seedling development | 9.19E-04 |
| 23 | GO:0046854: phosphatidylinositol phosphorylation | 9.19E-04 |
| 24 | GO:0048278: vesicle docking | 1.19E-03 |
| 25 | GO:0000271: polysaccharide biosynthetic process | 1.57E-03 |
| 26 | GO:0048653: anther development | 1.57E-03 |
| 27 | GO:0009960: endosperm development | 1.65E-03 |
| 28 | GO:0061025: membrane fusion | 1.73E-03 |
| 29 | GO:0006623: protein targeting to vacuole | 1.81E-03 |
| 30 | GO:0006635: fatty acid beta-oxidation | 1.89E-03 |
| 31 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.89E-03 |
| 32 | GO:0010029: regulation of seed germination | 2.52E-03 |
| 33 | GO:0006906: vesicle fusion | 2.61E-03 |
| 34 | GO:0030244: cellulose biosynthetic process | 2.90E-03 |
| 35 | GO:0009832: plant-type cell wall biogenesis | 3.00E-03 |
| 36 | GO:0048767: root hair elongation | 3.00E-03 |
| 37 | GO:0010119: regulation of stomatal movement | 3.20E-03 |
| 38 | GO:0009738: abscisic acid-activated signaling pathway | 3.20E-03 |
| 39 | GO:0009611: response to wounding | 3.38E-03 |
| 40 | GO:0006839: mitochondrial transport | 3.71E-03 |
| 41 | GO:0009620: response to fungus | 5.93E-03 |
| 42 | GO:0018105: peptidyl-serine phosphorylation | 6.44E-03 |
| 43 | GO:0071555: cell wall organization | 6.66E-03 |
| 44 | GO:0009409: response to cold | 9.02E-03 |
| 45 | GO:0007623: circadian rhythm | 9.23E-03 |
| 46 | GO:0006355: regulation of transcription, DNA-templated | 9.77E-03 |
| 47 | GO:0006470: protein dephosphorylation | 1.01E-02 |
| 48 | GO:0007166: cell surface receptor signaling pathway | 1.01E-02 |
| 49 | GO:0005975: carbohydrate metabolic process | 1.01E-02 |
| 50 | GO:0007275: multicellular organism development | 1.31E-02 |
| 51 | GO:0009723: response to ethylene | 1.39E-02 |
| 52 | GO:0046777: protein autophosphorylation | 1.53E-02 |
| 53 | GO:0006886: intracellular protein transport | 1.70E-02 |
| 54 | GO:0009408: response to heat | 1.93E-02 |
| 55 | GO:0009753: response to jasmonic acid | 2.02E-02 |
| 56 | GO:0009651: response to salt stress | 2.25E-02 |
| 57 | GO:0009873: ethylene-activated signaling pathway | 2.31E-02 |
| 58 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.35E-02 |
| 59 | GO:0035556: intracellular signal transduction | 3.01E-02 |
| 60 | GO:0045893: positive regulation of transcription, DNA-templated | 3.20E-02 |
| 61 | GO:0006952: defense response | 3.71E-02 |
| 62 | GO:0006351: transcription, DNA-templated | 4.61E-02 |
| 63 | GO:0009414: response to water deprivation | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 2.71E-06 |
| 2 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 8.26E-05 |
| 3 | GO:0051740: ethylene binding | 1.05E-04 |
| 4 | GO:0051753: mannan synthase activity | 2.82E-04 |
| 5 | GO:0005347: ATP transmembrane transporter activity | 2.82E-04 |
| 6 | GO:0015217: ADP transmembrane transporter activity | 2.82E-04 |
| 7 | GO:0004564: beta-fructofuranosidase activity | 3.84E-04 |
| 8 | GO:0004430: 1-phosphatidylinositol 4-kinase activity | 4.37E-04 |
| 9 | GO:0047617: acyl-CoA hydrolase activity | 5.49E-04 |
| 10 | GO:0004575: sucrose alpha-glucosidase activity | 5.49E-04 |
| 11 | GO:0030170: pyridoxal phosphate binding | 5.67E-04 |
| 12 | GO:0004673: protein histidine kinase activity | 6.08E-04 |
| 13 | GO:0000155: phosphorelay sensor kinase activity | 7.91E-04 |
| 14 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.55E-04 |
| 15 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.34E-03 |
| 16 | GO:0016853: isomerase activity | 1.73E-03 |
| 17 | GO:0016301: kinase activity | 1.80E-03 |
| 18 | GO:0004872: receptor activity | 1.81E-03 |
| 19 | GO:0019901: protein kinase binding | 1.81E-03 |
| 20 | GO:0016759: cellulose synthase activity | 2.15E-03 |
| 21 | GO:0004721: phosphoprotein phosphatase activity | 2.70E-03 |
| 22 | GO:0000149: SNARE binding | 3.61E-03 |
| 23 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.61E-03 |
| 24 | GO:0005484: SNAP receptor activity | 4.04E-03 |
| 25 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.35E-03 |
| 26 | GO:0005515: protein binding | 5.53E-03 |
| 27 | GO:0003677: DNA binding | 5.64E-03 |
| 28 | GO:0003779: actin binding | 6.18E-03 |
| 29 | GO:0004674: protein serine/threonine kinase activity | 6.48E-03 |
| 30 | GO:0015297: antiporter activity | 8.93E-03 |
| 31 | GO:0005524: ATP binding | 9.57E-03 |
| 32 | GO:0042802: identical protein binding | 1.09E-02 |
| 33 | GO:0016788: hydrolase activity, acting on ester bonds | 1.27E-02 |
| 34 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.41E-02 |
| 35 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.66E-02 |
| 36 | GO:0004722: protein serine/threonine phosphatase activity | 1.77E-02 |
| 37 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.79E-02 |
| 38 | GO:0016757: transferase activity, transferring glycosyl groups | 2.28E-02 |
| 39 | GO:0043565: sequence-specific DNA binding | 3.42E-02 |
| 40 | GO:0005509: calcium ion binding | 4.53E-02 |
| 41 | GO:0044212: transcription regulatory region DNA binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008287: protein serine/threonine phosphatase complex | 6.95E-05 |
| 2 | GO:0030140: trans-Golgi network transport vesicle | 2.34E-04 |
| 3 | GO:0030173: integral component of Golgi membrane | 2.82E-04 |
| 4 | GO:0005779: integral component of peroxisomal membrane | 4.37E-04 |
| 5 | GO:0005770: late endosome | 1.65E-03 |
| 6 | GO:0031902: late endosome membrane | 3.82E-03 |
| 7 | GO:0031201: SNARE complex | 3.82E-03 |
| 8 | GO:0005618: cell wall | 4.92E-03 |
| 9 | GO:0009524: phragmoplast | 7.65E-03 |
| 10 | GO:0046658: anchored component of plasma membrane | 1.12E-02 |
| 11 | GO:0005886: plasma membrane | 1.53E-02 |
| 12 | GO:0005743: mitochondrial inner membrane | 1.83E-02 |
| 13 | GO:0005737: cytoplasm | 2.75E-02 |
| 14 | GO:0005777: peroxisome | 3.20E-02 |
| 15 | GO:0005802: trans-Golgi network | 4.06E-02 |
| 16 | GO:0005622: intracellular | 4.37E-02 |
| 17 | GO:0005768: endosome | 4.45E-02 |