GO Enrichment Analysis of Co-expressed Genes with
AT2G25355
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031591: wybutosine biosynthetic process | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 4 | GO:0006177: GMP biosynthetic process | 2.76E-05 |
| 5 | GO:0006364: rRNA processing | 2.97E-05 |
| 6 | GO:0009553: embryo sac development | 4.92E-05 |
| 7 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.01E-05 |
| 8 | GO:0010197: polar nucleus fusion | 1.16E-04 |
| 9 | GO:0009855: determination of bilateral symmetry | 1.83E-04 |
| 10 | GO:0000460: maturation of 5.8S rRNA | 2.48E-04 |
| 11 | GO:1900864: mitochondrial RNA modification | 2.48E-04 |
| 12 | GO:0042273: ribosomal large subunit biogenesis | 2.48E-04 |
| 13 | GO:0000470: maturation of LSU-rRNA | 3.92E-04 |
| 14 | GO:0016554: cytidine to uridine editing | 3.92E-04 |
| 15 | GO:0000741: karyogamy | 3.92E-04 |
| 16 | GO:0016444: somatic cell DNA recombination | 4.69E-04 |
| 17 | GO:0080186: developmental vegetative growth | 5.49E-04 |
| 18 | GO:0009396: folic acid-containing compound biosynthetic process | 5.49E-04 |
| 19 | GO:0006261: DNA-dependent DNA replication | 7.18E-04 |
| 20 | GO:0007338: single fertilization | 8.07E-04 |
| 21 | GO:0006396: RNA processing | 8.88E-04 |
| 22 | GO:0035999: tetrahydrofolate interconversion | 8.99E-04 |
| 23 | GO:1900865: chloroplast RNA modification | 8.99E-04 |
| 24 | GO:0006541: glutamine metabolic process | 1.40E-03 |
| 25 | GO:0006334: nucleosome assembly | 1.97E-03 |
| 26 | GO:0007005: mitochondrion organization | 2.09E-03 |
| 27 | GO:0006730: one-carbon metabolic process | 2.09E-03 |
| 28 | GO:0010501: RNA secondary structure unwinding | 2.61E-03 |
| 29 | GO:0009960: endosperm development | 2.74E-03 |
| 30 | GO:0080156: mitochondrial mRNA modification | 3.16E-03 |
| 31 | GO:0009567: double fertilization forming a zygote and endosperm | 3.60E-03 |
| 32 | GO:0006412: translation | 4.34E-03 |
| 33 | GO:0016049: cell growth | 4.70E-03 |
| 34 | GO:0010311: lateral root formation | 5.04E-03 |
| 35 | GO:0048527: lateral root development | 5.38E-03 |
| 36 | GO:0000724: double-strand break repair via homologous recombination | 5.55E-03 |
| 37 | GO:0009853: photorespiration | 5.73E-03 |
| 38 | GO:0008283: cell proliferation | 6.82E-03 |
| 39 | GO:0000154: rRNA modification | 7.40E-03 |
| 40 | GO:0009451: RNA modification | 1.61E-02 |
| 41 | GO:0009723: response to ethylene | 2.39E-02 |
| 42 | GO:0032259: methylation | 3.22E-02 |
| 43 | GO:0009651: response to salt stress | 4.84E-02 |
| 44 | GO:0009555: pollen development | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102522: tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity | 0.00E+00 |
| 2 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0003723: RNA binding | 7.67E-08 |
| 4 | GO:0030515: snoRNA binding | 5.50E-06 |
| 5 | GO:0000166: nucleotide binding | 7.03E-06 |
| 6 | GO:0042134: rRNA primary transcript binding | 2.76E-05 |
| 7 | GO:0000175: 3'-5'-exoribonuclease activity | 3.08E-05 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 7.01E-05 |
| 9 | GO:0003938: IMP dehydrogenase activity | 7.01E-05 |
| 10 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 7.01E-05 |
| 11 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 7.01E-05 |
| 12 | GO:0003689: DNA clamp loader activity | 3.18E-04 |
| 13 | GO:0016462: pyrophosphatase activity | 3.92E-04 |
| 14 | GO:0008026: ATP-dependent helicase activity | 9.12E-04 |
| 15 | GO:0003735: structural constituent of ribosome | 1.01E-03 |
| 16 | GO:0019843: rRNA binding | 1.07E-03 |
| 17 | GO:0000049: tRNA binding | 1.19E-03 |
| 18 | GO:0004527: exonuclease activity | 2.74E-03 |
| 19 | GO:0004004: ATP-dependent RNA helicase activity | 4.54E-03 |
| 20 | GO:0050897: cobalt ion binding | 5.38E-03 |
| 21 | GO:0042393: histone binding | 6.27E-03 |
| 22 | GO:0008168: methyltransferase activity | 2.10E-02 |
| 23 | GO:0003682: chromatin binding | 2.24E-02 |
| 24 | GO:0016887: ATPase activity | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 1.56E-12 |
| 3 | GO:0032040: small-subunit processome | 1.71E-07 |
| 4 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.37E-05 |
| 5 | GO:0005834: heterotrimeric G-protein complex | 4.27E-05 |
| 6 | GO:0070545: PeBoW complex | 7.01E-05 |
| 7 | GO:0005663: DNA replication factor C complex | 2.48E-04 |
| 8 | GO:0005840: ribosome | 3.84E-04 |
| 9 | GO:0031428: box C/D snoRNP complex | 3.92E-04 |
| 10 | GO:0016363: nuclear matrix | 4.69E-04 |
| 11 | GO:0030687: preribosome, large subunit precursor | 5.49E-04 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 7.46E-04 |
| 13 | GO:0015030: Cajal body | 8.99E-04 |
| 14 | GO:0019013: viral nucleocapsid | 1.29E-03 |
| 15 | GO:0022627: cytosolic small ribosomal subunit | 1.91E-03 |
| 16 | GO:0015935: small ribosomal subunit | 1.97E-03 |
| 17 | GO:0005634: nucleus | 4.47E-03 |
| 18 | GO:0005774: vacuolar membrane | 1.12E-02 |
| 19 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.14E-02 |
| 20 | GO:0005654: nucleoplasm | 1.24E-02 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 1.26E-02 |
| 22 | GO:0009536: plastid | 1.77E-02 |
| 23 | GO:0009506: plasmodesma | 1.78E-02 |
| 24 | GO:0005773: vacuole | 1.93E-02 |
| 25 | GO:0005739: mitochondrion | 4.43E-02 |
| 26 | GO:0022626: cytosolic ribosome | 4.84E-02 |