co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G24600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0071475: cellular hyperosmotic salinity response	0.00E+00
4	GO:0009873: ethylene-activated signaling pathway	2.76E-08
5	GO:0042344: indole glucosinolate catabolic process	3.63E-06
6	GO:0052544: defense response by callose deposition in cell wall	5.87E-06
7	GO:0010200: response to chitin	1.16E-05
8	GO:0046345: abscisic acid catabolic process	1.59E-05
9	GO:0009865: pollen tube adhesion	1.40E-04
10	GO:1902265: abscisic acid homeostasis	1.40E-04
11	GO:0046938: phytochelatin biosynthetic process	1.40E-04
12	GO:0006811: ion transport	2.46E-04
13	GO:0015709: thiosulfate transport	3.20E-04
14	GO:0008616: queuosine biosynthetic process	3.20E-04
15	GO:0071422: succinate transmembrane transport	3.20E-04
16	GO:0031407: oxylipin metabolic process	3.20E-04
17	GO:0010289: homogalacturonan biosynthetic process	3.20E-04
18	GO:0007000: nucleolus organization	3.20E-04
19	GO:0006898: receptor-mediated endocytosis	3.20E-04
20	GO:0016045: detection of bacterium	5.26E-04
21	GO:0010359: regulation of anion channel activity	5.26E-04
22	GO:0090630: activation of GTPase activity	5.26E-04
23	GO:0051211: anisotropic cell growth	5.26E-04
24	GO:0000280: nuclear division	5.26E-04
25	GO:0001944: vasculature development	7.22E-04
26	GO:0080024: indolebutyric acid metabolic process	7.53E-04
27	GO:1901000: regulation of response to salt stress	7.53E-04
28	GO:0070301: cellular response to hydrogen peroxide	7.53E-04
29	GO:0015729: oxaloacetate transport	7.53E-04
30	GO:0030100: regulation of endocytosis	7.53E-04
31	GO:0015700: arsenite transport	7.53E-04
32	GO:0009687: abscisic acid metabolic process	9.98E-04
33	GO:0022622: root system development	9.98E-04
34	GO:0045892: negative regulation of transcription, DNA-templated	1.01E-03
35	GO:0006873: cellular ion homeostasis	1.26E-03
36	GO:0048497: maintenance of floral organ identity	1.26E-03
37	GO:0006461: protein complex assembly	1.26E-03
38	GO:0006665: sphingolipid metabolic process	1.26E-03
39	GO:0071423: malate transmembrane transport	1.26E-03
40	GO:0009823: cytokinin catabolic process	1.26E-03
41	GO:0019760: glucosinolate metabolic process	1.44E-03
42	GO:0047484: regulation of response to osmotic stress	1.55E-03
43	GO:0009117: nucleotide metabolic process	1.55E-03
44	GO:0035435: phosphate ion transmembrane transport	1.55E-03
45	GO:0010016: shoot system morphogenesis	1.86E-03
46	GO:0071470: cellular response to osmotic stress	1.86E-03
47	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.14E-03
48	GO:0010103: stomatal complex morphogenesis	2.18E-03
49	GO:0032880: regulation of protein localization	2.18E-03
50	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.18E-03
51	GO:0008272: sulfate transport	2.18E-03
52	GO:0010468: regulation of gene expression	2.32E-03
53	GO:0009690: cytokinin metabolic process	2.52E-03
54	GO:0007155: cell adhesion	2.52E-03
55	GO:0009819: drought recovery	2.52E-03
56	GO:0048527: lateral root development	2.56E-03
57	GO:0006351: transcription, DNA-templated	3.12E-03
58	GO:0006355: regulation of transcription, DNA-templated	3.20E-03
59	GO:0046685: response to arsenic-containing substance	3.26E-03
60	GO:0006631: fatty acid metabolic process	3.33E-03
61	GO:0007346: regulation of mitotic cell cycle	3.65E-03
62	GO:0048268: clathrin coat assembly	3.65E-03
63	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.41E-03
64	GO:0048229: gametophyte development	4.48E-03
65	GO:0006468: protein phosphorylation	4.48E-03
66	GO:0009682: induced systemic resistance	4.48E-03
67	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.92E-03
68	GO:2000012: regulation of auxin polar transport	5.37E-03
69	GO:0048367: shoot system development	5.92E-03
70	GO:0010030: positive regulation of seed germination	6.32E-03
71	GO:0070588: calcium ion transmembrane transport	6.32E-03
72	GO:0042545: cell wall modification	6.69E-03
73	GO:0009751: response to salicylic acid	6.81E-03
74	GO:0043622: cortical microtubule organization	7.84E-03
75	GO:0051321: meiotic cell cycle	8.38E-03
76	GO:0031408: oxylipin biosynthetic process	8.38E-03
77	GO:0071215: cellular response to abscisic acid stimulus	9.48E-03
78	GO:0010584: pollen exine formation	1.01E-02
79	GO:0010091: trichome branching	1.01E-02
80	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.06E-02
81	GO:0008284: positive regulation of cell proliferation	1.06E-02
82	GO:0042631: cellular response to water deprivation	1.12E-02
83	GO:0016310: phosphorylation	1.14E-02
84	GO:0048868: pollen tube development	1.18E-02
85	GO:0009741: response to brassinosteroid	1.18E-02
86	GO:0010268: brassinosteroid homeostasis	1.18E-02
87	GO:0010154: fruit development	1.18E-02
88	GO:0009958: positive gravitropism	1.18E-02
89	GO:0045490: pectin catabolic process	1.19E-02
90	GO:0006470: protein dephosphorylation	1.37E-02
91	GO:0007166: cell surface receptor signaling pathway	1.37E-02
92	GO:0016132: brassinosteroid biosynthetic process	1.37E-02
93	GO:0009639: response to red or far red light	1.58E-02
94	GO:0016125: sterol metabolic process	1.58E-02
95	GO:0016567: protein ubiquitination	1.65E-02
96	GO:0006952: defense response	1.69E-02
97	GO:0000910: cytokinesis	1.71E-02
98	GO:0010029: regulation of seed germination	1.86E-02
99	GO:0009817: defense response to fungus, incompatible interaction	2.16E-02
100	GO:0080167: response to karrikin	2.30E-02
101	GO:0009910: negative regulation of flower development	2.39E-02
102	GO:0045454: cell redox homeostasis	2.75E-02
103	GO:0006839: mitochondrial transport	2.80E-02
104	GO:0006897: endocytosis	2.88E-02
105	GO:0016042: lipid catabolic process	3.30E-02
106	GO:0042742: defense response to bacterium	3.48E-02
107	GO:0000165: MAPK cascade	3.50E-02
108	GO:0048364: root development	3.54E-02
109	GO:0009846: pollen germination	3.59E-02
110	GO:0030154: cell differentiation	3.87E-02
111	GO:0043086: negative regulation of catalytic activity	4.26E-02
112	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.48E-02
113	GO:0009624: response to nematode	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0010294: abscisic acid glucosyltransferase activity	2.60E-05
3	GO:0043565: sequence-specific DNA binding	3.64E-05
4	GO:0071992: phytochelatin transmembrane transporter activity	1.40E-04
5	GO:0046870: cadmium ion binding	1.40E-04
6	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.40E-04
7	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.40E-04
8	GO:1901677: phosphate transmembrane transporter activity	3.20E-04
9	GO:0004385: guanylate kinase activity	3.20E-04
10	GO:0016629: 12-oxophytodienoate reductase activity	3.20E-04
11	GO:0017022: myosin binding	3.20E-04
12	GO:0017040: ceramidase activity	3.20E-04
13	GO:0008479: queuine tRNA-ribosyltransferase activity	3.20E-04
14	GO:0015117: thiosulfate transmembrane transporter activity	3.20E-04
15	GO:0005310: dicarboxylic acid transmembrane transporter activity	5.26E-04
16	GO:0015141: succinate transmembrane transporter activity	5.26E-04
17	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	5.26E-04
18	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.88E-04
19	GO:0044212: transcription regulatory region DNA binding	5.89E-04
20	GO:0048487: beta-tubulin binding	7.53E-04
21	GO:0003883: CTP synthase activity	7.53E-04
22	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	7.53E-04
23	GO:0015131: oxaloacetate transmembrane transporter activity	7.53E-04
24	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.38E-04
25	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.38E-04
26	GO:0019139: cytokinin dehydrogenase activity	1.26E-03
27	GO:0019137: thioglucosidase activity	1.55E-03
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.70E-03
29	GO:0016301: kinase activity	1.87E-03
30	GO:0008194: UDP-glycosyltransferase activity	2.14E-03
31	GO:0015140: malate transmembrane transporter activity	2.18E-03
32	GO:0016209: antioxidant activity	2.52E-03
33	GO:0008308: voltage-gated anion channel activity	2.88E-03
34	GO:0005545: 1-phosphatidylinositol binding	4.06E-03
35	GO:0004713: protein tyrosine kinase activity	4.06E-03
36	GO:0061630: ubiquitin protein ligase activity	4.51E-03
37	GO:0015116: sulfate transmembrane transporter activity	4.92E-03
38	GO:0005262: calcium channel activity	5.37E-03
39	GO:0045330: aspartyl esterase activity	5.37E-03
40	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.84E-03
41	GO:0008083: growth factor activity	5.84E-03
42	GO:0016874: ligase activity	6.49E-03
43	GO:0030599: pectinesterase activity	6.49E-03
44	GO:0035251: UDP-glucosyltransferase activity	8.38E-03
45	GO:0004707: MAP kinase activity	8.38E-03
46	GO:0003677: DNA binding	1.01E-02
47	GO:0030276: clathrin binding	1.18E-02
48	GO:0010181: FMN binding	1.25E-02
49	GO:0004674: protein serine/threonine kinase activity	1.34E-02
50	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.64E-02
51	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.64E-02
52	GO:0016597: amino acid binding	1.71E-02
53	GO:0016788: hydrolase activity, acting on ester bonds	1.89E-02
54	GO:0102483: scopolin beta-glucosidase activity	2.00E-02
55	GO:0008236: serine-type peptidase activity	2.08E-02
56	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.08E-02
57	GO:0005096: GTPase activator activity	2.23E-02
58	GO:0005507: copper ion binding	2.25E-02
59	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.31E-02
60	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.39E-02
61	GO:0052689: carboxylic ester hydrolase activity	2.54E-02
62	GO:0008422: beta-glucosidase activity	2.72E-02
63	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.75E-02
64	GO:0004722: protein serine/threonine phosphatase activity	3.02E-02
65	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.06E-02
66	GO:0035091: phosphatidylinositol binding	3.23E-02
67	GO:0016298: lipase activity	3.87E-02
68	GO:0008234: cysteine-type peptidase activity	4.06E-02
69	GO:0016491: oxidoreductase activity	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	1.40E-04
2	GO:0030133: transport vesicle	3.20E-04
3	GO:0045177: apical part of cell	7.53E-04
4	GO:0005798: Golgi-associated vesicle	1.55E-03
5	GO:0016604: nuclear body	3.65E-03
6	GO:0005938: cell cortex	5.37E-03
7	GO:0005769: early endosome	6.81E-03
8	GO:0043231: intracellular membrane-bounded organelle	7.85E-03
9	GO:0005905: clathrin-coated pit	8.38E-03
10	GO:0030136: clathrin-coated vesicle	1.06E-02
11	GO:0005615: extracellular space	1.34E-02
12	GO:0046658: anchored component of plasma membrane	1.58E-02
13	GO:0005618: cell wall	2.59E-02
14	GO:0005622: intracellular	2.96E-02
15	GO:0090406: pollen tube	3.06E-02
16	GO:0005743: mitochondrial inner membrane	3.16E-02
17	GO:0005681: spliceosomal complex	4.26E-02
18	GO:0016607: nuclear speck	4.35E-02
19	GO:0010008: endosome membrane	4.35E-02