GO Enrichment Analysis of Co-expressed Genes with
AT2G24390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 2 | GO:0016093: polyprenol metabolic process | 0.00E+00 |
| 3 | GO:0045747: positive regulation of Notch signaling pathway | 0.00E+00 |
| 4 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 5 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 6 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 7 | GO:0033317: pantothenate biosynthetic process from valine | 0.00E+00 |
| 8 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 9 | GO:0051776: detection of redox state | 0.00E+00 |
| 10 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 11 | GO:0006481: C-terminal protein methylation | 7.07E-05 |
| 12 | GO:0071266: 'de novo' L-methionine biosynthetic process | 7.07E-05 |
| 13 | GO:0019346: transsulfuration | 7.07E-05 |
| 14 | GO:0019343: cysteine biosynthetic process via cystathionine | 7.07E-05 |
| 15 | GO:2000030: regulation of response to red or far red light | 1.70E-04 |
| 16 | GO:0080183: response to photooxidative stress | 1.70E-04 |
| 17 | GO:0016122: xanthophyll metabolic process | 1.70E-04 |
| 18 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.90E-04 |
| 19 | GO:0055114: oxidation-reduction process | 2.14E-04 |
| 20 | GO:0045454: cell redox homeostasis | 2.35E-04 |
| 21 | GO:0016226: iron-sulfur cluster assembly | 2.70E-04 |
| 22 | GO:1901562: response to paraquat | 2.86E-04 |
| 23 | GO:0015940: pantothenate biosynthetic process | 2.86E-04 |
| 24 | GO:0006624: vacuolar protein processing | 4.15E-04 |
| 25 | GO:0006221: pyrimidine nucleotide biosynthetic process | 5.53E-04 |
| 26 | GO:0006749: glutathione metabolic process | 5.53E-04 |
| 27 | GO:0034613: cellular protein localization | 5.53E-04 |
| 28 | GO:0010109: regulation of photosynthesis | 5.53E-04 |
| 29 | GO:0010117: photoprotection | 7.00E-04 |
| 30 | GO:0018344: protein geranylgeranylation | 7.00E-04 |
| 31 | GO:0006796: phosphate-containing compound metabolic process | 8.57E-04 |
| 32 | GO:0009117: nucleotide metabolic process | 8.57E-04 |
| 33 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.02E-03 |
| 34 | GO:0010016: shoot system morphogenesis | 1.02E-03 |
| 35 | GO:0010189: vitamin E biosynthetic process | 1.02E-03 |
| 36 | GO:0009853: photorespiration | 1.15E-03 |
| 37 | GO:0050790: regulation of catalytic activity | 1.19E-03 |
| 38 | GO:0005978: glycogen biosynthetic process | 1.37E-03 |
| 39 | GO:0030091: protein repair | 1.37E-03 |
| 40 | GO:0009880: embryonic pattern specification | 1.56E-03 |
| 41 | GO:0015996: chlorophyll catabolic process | 1.56E-03 |
| 42 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.56E-03 |
| 43 | GO:0046685: response to arsenic-containing substance | 1.76E-03 |
| 44 | GO:0009098: leucine biosynthetic process | 1.97E-03 |
| 45 | GO:0009688: abscisic acid biosynthetic process | 2.19E-03 |
| 46 | GO:0048367: shoot system development | 2.39E-03 |
| 47 | GO:0043085: positive regulation of catalytic activity | 2.41E-03 |
| 48 | GO:0006879: cellular iron ion homeostasis | 2.41E-03 |
| 49 | GO:0006487: protein N-linked glycosylation | 3.89E-03 |
| 50 | GO:0016575: histone deacetylation | 4.17E-03 |
| 51 | GO:0019915: lipid storage | 4.44E-03 |
| 52 | GO:0006012: galactose metabolic process | 5.02E-03 |
| 53 | GO:0010051: xylem and phloem pattern formation | 5.93E-03 |
| 54 | GO:0008360: regulation of cell shape | 6.24E-03 |
| 55 | GO:0006662: glycerol ether metabolic process | 6.24E-03 |
| 56 | GO:0019252: starch biosynthetic process | 6.89E-03 |
| 57 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 7.22E-03 |
| 58 | GO:0019761: glucosinolate biosynthetic process | 7.56E-03 |
| 59 | GO:0006464: cellular protein modification process | 8.25E-03 |
| 60 | GO:0010286: heat acclimation | 8.61E-03 |
| 61 | GO:0016579: protein deubiquitination | 8.97E-03 |
| 62 | GO:0080167: response to karrikin | 9.13E-03 |
| 63 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 9.71E-03 |
| 64 | GO:0008219: cell death | 1.13E-02 |
| 65 | GO:0009407: toxin catabolic process | 1.21E-02 |
| 66 | GO:0010043: response to zinc ion | 1.25E-02 |
| 67 | GO:0006508: proteolysis | 1.26E-02 |
| 68 | GO:0034599: cellular response to oxidative stress | 1.37E-02 |
| 69 | GO:0048364: root development | 1.41E-02 |
| 70 | GO:0009636: response to toxic substance | 1.73E-02 |
| 71 | GO:0005975: carbohydrate metabolic process | 1.85E-02 |
| 72 | GO:0046686: response to cadmium ion | 1.91E-02 |
| 73 | GO:0006486: protein glycosylation | 1.97E-02 |
| 74 | GO:0048316: seed development | 2.26E-02 |
| 75 | GO:0009611: response to wounding | 2.46E-02 |
| 76 | GO:0035556: intracellular signal transduction | 2.54E-02 |
| 77 | GO:0010150: leaf senescence | 3.73E-02 |
| 78 | GO:0009451: RNA modification | 3.79E-02 |
| 79 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.85E-02 |
| 80 | GO:0006468: protein phosphorylation | 4.89E-02 |
| 81 | GO:0009651: response to salt stress | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
| 2 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 3 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 4 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 5 | GO:0004592: pantoate-beta-alanine ligase activity | 0.00E+00 |
| 6 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 7 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 8 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 2.59E-06 |
| 9 | GO:0004121: cystathionine beta-lyase activity | 7.07E-05 |
| 10 | GO:0030611: arsenate reductase activity | 7.07E-05 |
| 11 | GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | 7.07E-05 |
| 12 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 7.07E-05 |
| 13 | GO:0004123: cystathionine gamma-lyase activity | 7.07E-05 |
| 14 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 7.07E-05 |
| 15 | GO:0004046: aminoacylase activity | 1.70E-04 |
| 16 | GO:0019172: glyoxalase III activity | 1.70E-04 |
| 17 | GO:0004338: glucan exo-1,3-beta-glucosidase activity | 1.70E-04 |
| 18 | GO:0004848: ureidoglycolate hydrolase activity | 2.86E-04 |
| 19 | GO:0003861: 3-isopropylmalate dehydratase activity | 2.86E-04 |
| 20 | GO:0004663: Rab geranylgeranyltransferase activity | 2.86E-04 |
| 21 | GO:0003962: cystathionine gamma-synthase activity | 2.86E-04 |
| 22 | GO:0016787: hydrolase activity | 4.14E-04 |
| 23 | GO:0035529: NADH pyrophosphatase activity | 4.15E-04 |
| 24 | GO:0016853: isomerase activity | 4.36E-04 |
| 25 | GO:0004197: cysteine-type endopeptidase activity | 5.32E-04 |
| 26 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 5.53E-04 |
| 27 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.67E-04 |
| 28 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 8.57E-04 |
| 29 | GO:0051920: peroxiredoxin activity | 1.02E-03 |
| 30 | GO:0004427: inorganic diphosphatase activity | 1.19E-03 |
| 31 | GO:0004034: aldose 1-epimerase activity | 1.37E-03 |
| 32 | GO:0016209: antioxidant activity | 1.37E-03 |
| 33 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.56E-03 |
| 34 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.56E-03 |
| 35 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.76E-03 |
| 36 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.76E-03 |
| 37 | GO:0008047: enzyme activator activity | 2.19E-03 |
| 38 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.41E-03 |
| 39 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.88E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 2.88E-03 |
| 41 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.12E-03 |
| 42 | GO:0004175: endopeptidase activity | 3.12E-03 |
| 43 | GO:0004725: protein tyrosine phosphatase activity | 3.63E-03 |
| 44 | GO:0051536: iron-sulfur cluster binding | 3.89E-03 |
| 45 | GO:0004407: histone deacetylase activity | 3.89E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 5.62E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 6.56E-03 |
| 48 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 7.22E-03 |
| 49 | GO:0004806: triglyceride lipase activity | 1.05E-02 |
| 50 | GO:0030247: polysaccharide binding | 1.05E-02 |
| 51 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 52 | GO:0003824: catalytic activity | 1.23E-02 |
| 53 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.46E-02 |
| 54 | GO:0004364: glutathione transferase activity | 1.55E-02 |
| 55 | GO:0004185: serine-type carboxypeptidase activity | 1.59E-02 |
| 56 | GO:0005198: structural molecule activity | 1.73E-02 |
| 57 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-02 |
| 58 | GO:0008234: cysteine-type peptidase activity | 2.11E-02 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 2.58E-02 |
| 60 | GO:0016829: lyase activity | 3.14E-02 |
| 61 | GO:0030170: pyridoxal phosphate binding | 3.19E-02 |
| 62 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.42E-02 |
| 63 | GO:0005506: iron ion binding | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005747: mitochondrial respiratory chain complex I | 1.35E-05 |
| 2 | GO:0045271: respiratory chain complex I | 2.22E-04 |
| 3 | GO:0000323: lytic vacuole | 4.15E-04 |
| 4 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 4.15E-04 |
| 5 | GO:0009517: PSII associated light-harvesting complex II | 5.53E-04 |
| 6 | GO:0005773: vacuole | 7.00E-04 |
| 7 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.56E-03 |
| 8 | GO:0031966: mitochondrial membrane | 1.83E-03 |
| 9 | GO:0009507: chloroplast | 1.85E-03 |
| 10 | GO:0005765: lysosomal membrane | 2.41E-03 |
| 11 | GO:0005764: lysosome | 3.12E-03 |
| 12 | GO:0010287: plastoglobule | 3.28E-03 |
| 13 | GO:0009570: chloroplast stroma | 3.79E-03 |
| 14 | GO:0005759: mitochondrial matrix | 4.34E-03 |
| 15 | GO:0005615: extracellular space | 5.33E-03 |
| 16 | GO:0009504: cell plate | 6.89E-03 |
| 17 | GO:0031969: chloroplast membrane | 9.13E-03 |
| 18 | GO:0005829: cytosol | 1.04E-02 |
| 19 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 20 | GO:0005774: vacuolar membrane | 1.51E-02 |
| 21 | GO:0005856: cytoskeleton | 1.73E-02 |
| 22 | GO:0005789: endoplasmic reticulum membrane | 1.87E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 24 | GO:0005777: peroxisome | 2.76E-02 |
| 25 | GO:0046658: anchored component of plasma membrane | 4.55E-02 |