co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G24290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
2	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
3	GO:0006907: pinocytosis	0.00E+00
4	GO:0007037: vacuolar phosphate transport	0.00E+00
5	GO:0016123: xanthophyll biosynthetic process	2.48E-05
6	GO:0042371: vitamin K biosynthetic process	1.35E-04
7	GO:0071454: cellular response to anoxia	1.35E-04
8	GO:0048438: floral whorl development	1.35E-04
9	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	3.11E-04
10	GO:0080153: negative regulation of reductive pentose-phosphate cycle	3.11E-04
11	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.11E-04
12	GO:0001578: microtubule bundle formation	5.13E-04
13	GO:0006760: folic acid-containing compound metabolic process	5.13E-04
14	GO:0007020: microtubule nucleation	9.73E-04
15	GO:0046656: folic acid biosynthetic process	9.73E-04
16	GO:0071483: cellular response to blue light	9.73E-04
17	GO:0051322: anaphase	9.73E-04
18	GO:0031935: regulation of chromatin silencing	9.73E-04
19	GO:0009765: photosynthesis, light harvesting	9.73E-04
20	GO:0016120: carotene biosynthetic process	1.23E-03
21	GO:0046785: microtubule polymerization	1.23E-03
22	GO:0009616: virus induced gene silencing	1.23E-03
23	GO:0000741: karyogamy	1.51E-03
24	GO:0035194: posttranscriptional gene silencing by RNA	1.51E-03
25	GO:0000910: cytokinesis	1.56E-03
26	GO:0010076: maintenance of floral meristem identity	1.81E-03
27	GO:0046654: tetrahydrofolate biosynthetic process	1.81E-03
28	GO:0010189: vitamin E biosynthetic process	1.81E-03
29	GO:0009451: RNA modification	1.81E-03
30	GO:0080111: DNA demethylation	2.12E-03
31	GO:0048528: post-embryonic root development	2.12E-03
32	GO:0009772: photosynthetic electron transport in photosystem II	2.12E-03
33	GO:1900056: negative regulation of leaf senescence	2.12E-03
34	GO:0042255: ribosome assembly	2.46E-03
35	GO:0006353: DNA-templated transcription, termination	2.46E-03
36	GO:0009910: negative regulation of flower development	2.46E-03
37	GO:0071482: cellular response to light stimulus	2.81E-03
38	GO:0006098: pentose-phosphate shunt	3.17E-03
39	GO:0009744: response to sucrose	3.47E-03
40	GO:0010380: regulation of chlorophyll biosynthetic process	3.55E-03
41	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.95E-03
42	GO:0006949: syncytium formation	3.95E-03
43	GO:0006352: DNA-templated transcription, initiation	4.36E-03
44	GO:0009773: photosynthetic electron transport in photosystem I	4.36E-03
45	GO:0045037: protein import into chloroplast stroma	4.79E-03
46	GO:0010582: floral meristem determinacy	4.79E-03
47	GO:0009725: response to hormone	5.22E-03
48	GO:0006094: gluconeogenesis	5.22E-03
49	GO:0009767: photosynthetic electron transport chain	5.22E-03
50	GO:0019253: reductive pentose-phosphate cycle	5.68E-03
51	GO:0010207: photosystem II assembly	5.68E-03
52	GO:0009266: response to temperature stimulus	5.68E-03
53	GO:0034605: cellular response to heat	5.68E-03
54	GO:0090351: seedling development	6.14E-03
55	GO:0006863: purine nucleobase transport	6.62E-03
56	GO:0006289: nucleotide-excision repair	7.11E-03
57	GO:0043622: cortical microtubule organization	7.62E-03
58	GO:0007017: microtubule-based process	7.62E-03
59	GO:0009695: jasmonic acid biosynthetic process	7.62E-03
60	GO:0080092: regulation of pollen tube growth	8.67E-03
61	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	9.21E-03
62	GO:0009793: embryo development ending in seed dormancy	9.60E-03
63	GO:0070417: cellular response to cold	1.03E-02
64	GO:0016117: carotenoid biosynthetic process	1.03E-02
65	GO:0008033: tRNA processing	1.09E-02
66	GO:0009958: positive gravitropism	1.15E-02
67	GO:0010197: polar nucleus fusion	1.15E-02
68	GO:0048868: pollen tube development	1.15E-02
69	GO:0015986: ATP synthesis coupled proton transport	1.21E-02
70	GO:0007018: microtubule-based movement	1.21E-02
71	GO:0008654: phospholipid biosynthetic process	1.27E-02
72	GO:0010193: response to ozone	1.34E-02
73	GO:0010583: response to cyclopentenone	1.40E-02
74	GO:0016032: viral process	1.40E-02
75	GO:0032502: developmental process	1.40E-02
76	GO:0009828: plant-type cell wall loosening	1.53E-02
77	GO:0001666: response to hypoxia	1.73E-02
78	GO:0016126: sterol biosynthetic process	1.73E-02
79	GO:0009658: chloroplast organization	1.78E-02
80	GO:0006811: ion transport	2.24E-02
81	GO:0007568: aging	2.32E-02
82	GO:0008283: cell proliferation	2.97E-02
83	GO:0006260: DNA replication	3.40E-02
84	GO:0000165: MAPK cascade	3.40E-02
85	GO:0009664: plant-type cell wall organization	3.49E-02
86	GO:0010224: response to UV-B	3.76E-02
87	GO:0006096: glycolytic process	4.13E-02
88	GO:0009553: embryo sac development	4.62E-02
89	GO:0009742: brassinosteroid mediated signaling pathway	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0010276: phytol kinase activity	0.00E+00
3	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
4	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
5	GO:0004150: dihydroneopterin aldolase activity	3.11E-04
6	GO:0102083: 7,8-dihydromonapterin aldolase activity	3.11E-04
7	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.49E-04
8	GO:0004848: ureidoglycolate hydrolase activity	5.13E-04
9	GO:0000900: translation repressor activity, nucleic acid binding	5.13E-04
10	GO:0046423: allene-oxide cyclase activity	5.13E-04
11	GO:0003777: microtubule motor activity	6.53E-04
12	GO:0001053: plastid sigma factor activity	9.73E-04
13	GO:0016987: sigma factor activity	9.73E-04
14	GO:0004605: phosphatidate cytidylyltransferase activity	1.51E-03
15	GO:0004332: fructose-bisphosphate aldolase activity	1.51E-03
16	GO:0008017: microtubule binding	1.86E-03
17	GO:0003724: RNA helicase activity	2.81E-03
18	GO:0016491: oxidoreductase activity	3.59E-03
19	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.36E-03
20	GO:0003690: double-stranded DNA binding	4.82E-03
21	GO:0003887: DNA-directed DNA polymerase activity	6.62E-03
22	GO:0004519: endonuclease activity	7.32E-03
23	GO:0005345: purine nucleobase transmembrane transporter activity	7.62E-03
24	GO:0019843: rRNA binding	8.29E-03
25	GO:0003674: molecular_function	8.79E-03
26	GO:0003727: single-stranded RNA binding	9.77E-03
27	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.15E-02
28	GO:0010181: FMN binding	1.21E-02
29	GO:0004872: receptor activity	1.27E-02
30	GO:0048038: quinone binding	1.34E-02
31	GO:0004518: nuclease activity	1.40E-02
32	GO:0008483: transaminase activity	1.60E-02
33	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.64E-02
34	GO:0003723: RNA binding	2.97E-02
35	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.67E-02
36	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.23E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.02E-08
2	GO:0009535: chloroplast thylakoid membrane	3.88E-05
3	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.40E-04
4	GO:0009706: chloroplast inner membrane	8.92E-04
5	GO:0030286: dynein complex	9.73E-04
6	GO:0072686: mitotic spindle	1.23E-03
7	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	1.51E-03
8	GO:0010005: cortical microtubule, transverse to long axis	1.81E-03
9	GO:0009840: chloroplastic endopeptidase Clp complex	1.81E-03
10	GO:0000123: histone acetyltransferase complex	2.12E-03
11	GO:0046930: pore complex	2.81E-03
12	GO:0005819: spindle	2.94E-03
13	GO:0005874: microtubule	3.84E-03
14	GO:0055028: cortical microtubule	3.95E-03
15	GO:0016324: apical plasma membrane	3.95E-03
16	GO:0005938: cell cortex	5.22E-03
17	GO:0009574: preprophase band	5.22E-03
18	GO:0030095: chloroplast photosystem II	5.68E-03
19	GO:0043234: protein complex	6.62E-03
20	GO:0005875: microtubule associated complex	6.62E-03
21	GO:0042651: thylakoid membrane	7.62E-03
22	GO:0005871: kinesin complex	1.03E-02
23	GO:0009941: chloroplast envelope	1.13E-02
24	GO:0046658: anchored component of plasma membrane	1.52E-02
25	GO:0010319: stromule	1.60E-02
26	GO:0009534: chloroplast thylakoid	1.73E-02
27	GO:0031969: chloroplast membrane	2.21E-02
28	GO:0031225: anchored component of membrane	2.39E-02
29	GO:0031966: mitochondrial membrane	3.49E-02
30	GO:0043231: intracellular membrane-bounded organelle	3.59E-02
31	GO:0009536: plastid	4.25E-02
32	GO:0009505: plant-type cell wall	4.37E-02