GO Enrichment Analysis of Co-expressed Genes with
AT2G24270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 3 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 4 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 5 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:0015979: photosynthesis | 2.38E-20 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.27E-15 |
| 9 | GO:0018298: protein-chromophore linkage | 1.20E-14 |
| 10 | GO:0010207: photosystem II assembly | 6.65E-12 |
| 11 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.72E-09 |
| 12 | GO:0009645: response to low light intensity stimulus | 2.72E-09 |
| 13 | GO:0010114: response to red light | 2.24E-08 |
| 14 | GO:0009644: response to high light intensity | 2.89E-08 |
| 15 | GO:0006021: inositol biosynthetic process | 4.49E-08 |
| 16 | GO:0009416: response to light stimulus | 5.78E-08 |
| 17 | GO:0042549: photosystem II stabilization | 2.03E-07 |
| 18 | GO:0010218: response to far red light | 2.95E-07 |
| 19 | GO:0010196: nonphotochemical quenching | 5.88E-07 |
| 20 | GO:0035304: regulation of protein dephosphorylation | 7.96E-07 |
| 21 | GO:0009642: response to light intensity | 9.09E-07 |
| 22 | GO:0010206: photosystem II repair | 1.90E-06 |
| 23 | GO:0019684: photosynthesis, light reaction | 4.56E-06 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 6.74E-06 |
| 25 | GO:0006094: gluconeogenesis | 7.37E-06 |
| 26 | GO:0019253: reductive pentose-phosphate cycle | 9.11E-06 |
| 27 | GO:0009637: response to blue light | 1.39E-05 |
| 28 | GO:0055114: oxidation-reduction process | 1.64E-05 |
| 29 | GO:0009269: response to desiccation | 2.23E-05 |
| 30 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.28E-05 |
| 31 | GO:0010189: vitamin E biosynthetic process | 4.63E-05 |
| 32 | GO:0006096: glycolytic process | 5.79E-05 |
| 33 | GO:0006098: pentose-phosphate shunt | 1.25E-04 |
| 34 | GO:0051775: response to redox state | 1.25E-04 |
| 35 | GO:0006659: phosphatidylserine biosynthetic process | 1.25E-04 |
| 36 | GO:0010028: xanthophyll cycle | 1.25E-04 |
| 37 | GO:0010205: photoinhibition | 1.51E-04 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 2.10E-04 |
| 39 | GO:0043085: positive regulation of catalytic activity | 2.10E-04 |
| 40 | GO:0034599: cellular response to oxidative stress | 2.59E-04 |
| 41 | GO:0006006: glucose metabolic process | 2.77E-04 |
| 42 | GO:0009629: response to gravity | 2.90E-04 |
| 43 | GO:0016124: xanthophyll catabolic process | 2.90E-04 |
| 44 | GO:0097054: L-glutamate biosynthetic process | 2.90E-04 |
| 45 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.90E-04 |
| 46 | GO:0016121: carotene catabolic process | 2.90E-04 |
| 47 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.90E-04 |
| 48 | GO:0042742: defense response to bacterium | 4.35E-04 |
| 49 | GO:1902448: positive regulation of shade avoidance | 4.78E-04 |
| 50 | GO:0006000: fructose metabolic process | 4.78E-04 |
| 51 | GO:0090391: granum assembly | 4.78E-04 |
| 52 | GO:0006107: oxaloacetate metabolic process | 6.85E-04 |
| 53 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.85E-04 |
| 54 | GO:0006537: glutamate biosynthetic process | 6.85E-04 |
| 55 | GO:0006020: inositol metabolic process | 6.85E-04 |
| 56 | GO:0071484: cellular response to light intensity | 6.85E-04 |
| 57 | GO:0006662: glycerol ether metabolic process | 8.52E-04 |
| 58 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.08E-04 |
| 59 | GO:0009765: photosynthesis, light harvesting | 9.08E-04 |
| 60 | GO:0006109: regulation of carbohydrate metabolic process | 9.08E-04 |
| 61 | GO:0015994: chlorophyll metabolic process | 9.08E-04 |
| 62 | GO:0030104: water homeostasis | 9.08E-04 |
| 63 | GO:0006546: glycine catabolic process | 9.08E-04 |
| 64 | GO:0006734: NADH metabolic process | 9.08E-04 |
| 65 | GO:0019676: ammonia assimilation cycle | 9.08E-04 |
| 66 | GO:0015976: carbon utilization | 9.08E-04 |
| 67 | GO:0006814: sodium ion transport | 9.12E-04 |
| 68 | GO:0009791: post-embryonic development | 9.76E-04 |
| 69 | GO:0019252: starch biosynthetic process | 9.76E-04 |
| 70 | GO:0008654: phospholipid biosynthetic process | 9.76E-04 |
| 71 | GO:0006656: phosphatidylcholine biosynthetic process | 1.15E-03 |
| 72 | GO:0010236: plastoquinone biosynthetic process | 1.15E-03 |
| 73 | GO:0016123: xanthophyll biosynthetic process | 1.15E-03 |
| 74 | GO:0046855: inositol phosphate dephosphorylation | 1.41E-03 |
| 75 | GO:0009635: response to herbicide | 1.41E-03 |
| 76 | GO:0050665: hydrogen peroxide biosynthetic process | 1.41E-03 |
| 77 | GO:0010027: thylakoid membrane organization | 1.48E-03 |
| 78 | GO:0071470: cellular response to osmotic stress | 1.68E-03 |
| 79 | GO:0009854: oxidative photosynthetic carbon pathway | 1.68E-03 |
| 80 | GO:0071446: cellular response to salicylic acid stimulus | 1.98E-03 |
| 81 | GO:1900057: positive regulation of leaf senescence | 1.98E-03 |
| 82 | GO:0009735: response to cytokinin | 2.24E-03 |
| 83 | GO:0030091: protein repair | 2.29E-03 |
| 84 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.29E-03 |
| 85 | GO:0006002: fructose 6-phosphate metabolic process | 2.61E-03 |
| 86 | GO:0071482: cellular response to light stimulus | 2.61E-03 |
| 87 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 2.61E-03 |
| 88 | GO:0098656: anion transmembrane transport | 2.95E-03 |
| 89 | GO:0009245: lipid A biosynthetic process | 2.95E-03 |
| 90 | GO:0090333: regulation of stomatal closure | 2.95E-03 |
| 91 | GO:0009744: response to sucrose | 3.12E-03 |
| 92 | GO:0009409: response to cold | 3.13E-03 |
| 93 | GO:0080167: response to karrikin | 3.51E-03 |
| 94 | GO:0009688: abscisic acid biosynthetic process | 3.68E-03 |
| 95 | GO:0046686: response to cadmium ion | 4.00E-03 |
| 96 | GO:0000272: polysaccharide catabolic process | 4.06E-03 |
| 97 | GO:0006790: sulfur compound metabolic process | 4.45E-03 |
| 98 | GO:0005983: starch catabolic process | 4.45E-03 |
| 99 | GO:0005986: sucrose biosynthetic process | 4.86E-03 |
| 100 | GO:0006108: malate metabolic process | 4.86E-03 |
| 101 | GO:0090351: seedling development | 5.71E-03 |
| 102 | GO:0046854: phosphatidylinositol phosphorylation | 5.71E-03 |
| 103 | GO:0048511: rhythmic process | 7.56E-03 |
| 104 | GO:0006979: response to oxidative stress | 7.58E-03 |
| 105 | GO:0071215: cellular response to abscisic acid stimulus | 8.56E-03 |
| 106 | GO:0009561: megagametogenesis | 9.07E-03 |
| 107 | GO:0042335: cuticle development | 1.01E-02 |
| 108 | GO:0010182: sugar mediated signaling pathway | 1.07E-02 |
| 109 | GO:0071554: cell wall organization or biogenesis | 1.24E-02 |
| 110 | GO:0051607: defense response to virus | 1.54E-02 |
| 111 | GO:0009658: chloroplast organization | 1.60E-02 |
| 112 | GO:0009627: systemic acquired resistance | 1.74E-02 |
| 113 | GO:0048573: photoperiodism, flowering | 1.81E-02 |
| 114 | GO:0016311: dephosphorylation | 1.87E-02 |
| 115 | GO:0009813: flavonoid biosynthetic process | 2.01E-02 |
| 116 | GO:0006811: ion transport | 2.08E-02 |
| 117 | GO:0010119: regulation of stomatal movement | 2.15E-02 |
| 118 | GO:0009853: photorespiration | 2.30E-02 |
| 119 | GO:0016051: carbohydrate biosynthetic process | 2.30E-02 |
| 120 | GO:0006099: tricarboxylic acid cycle | 2.37E-02 |
| 121 | GO:0045454: cell redox homeostasis | 2.38E-02 |
| 122 | GO:0009793: embryo development ending in seed dormancy | 2.64E-02 |
| 123 | GO:0042542: response to hydrogen peroxide | 2.68E-02 |
| 124 | GO:0009640: photomorphogenesis | 2.75E-02 |
| 125 | GO:0009926: auxin polar transport | 2.75E-02 |
| 126 | GO:0032259: methylation | 2.81E-02 |
| 127 | GO:0009408: response to heat | 2.93E-02 |
| 128 | GO:0031347: regulation of defense response | 3.15E-02 |
| 129 | GO:0009733: response to auxin | 3.35E-02 |
| 130 | GO:0010224: response to UV-B | 3.49E-02 |
| 131 | GO:0043086: negative regulation of catalytic activity | 3.83E-02 |
| 132 | GO:0009624: response to nematode | 4.37E-02 |
| 133 | GO:0005975: carbohydrate metabolic process | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 3 | GO:0010242: oxygen evolving activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 6 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 7 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 8 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 9 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 10 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 11 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 12 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 13 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 14 | GO:0031409: pigment binding | 4.60E-16 |
| 15 | GO:0016168: chlorophyll binding | 3.95E-13 |
| 16 | GO:0004512: inositol-3-phosphate synthase activity | 7.96E-07 |
| 17 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 7.96E-07 |
| 18 | GO:0008266: poly(U) RNA binding | 9.11E-06 |
| 19 | GO:0046872: metal ion binding | 1.21E-05 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 3.28E-05 |
| 21 | GO:0071949: FAD binding | 1.25E-04 |
| 22 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.25E-04 |
| 23 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.25E-04 |
| 24 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.25E-04 |
| 25 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.25E-04 |
| 26 | GO:0008047: enzyme activator activity | 1.79E-04 |
| 27 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.77E-04 |
| 28 | GO:0031072: heat shock protein binding | 2.77E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.90E-04 |
| 30 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.90E-04 |
| 31 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.90E-04 |
| 32 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.90E-04 |
| 33 | GO:0019172: glyoxalase III activity | 2.90E-04 |
| 34 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.90E-04 |
| 35 | GO:0047746: chlorophyllase activity | 2.90E-04 |
| 36 | GO:0004373: glycogen (starch) synthase activity | 4.78E-04 |
| 37 | GO:0003913: DNA photolyase activity | 4.78E-04 |
| 38 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.78E-04 |
| 39 | GO:0008514: organic anion transmembrane transporter activity | 6.80E-04 |
| 40 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.85E-04 |
| 41 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.85E-04 |
| 42 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.85E-04 |
| 43 | GO:0016851: magnesium chelatase activity | 6.85E-04 |
| 44 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.85E-04 |
| 45 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.85E-04 |
| 46 | GO:0008508: bile acid:sodium symporter activity | 6.85E-04 |
| 47 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.85E-04 |
| 48 | GO:0047134: protein-disulfide reductase activity | 7.35E-04 |
| 49 | GO:0009011: starch synthase activity | 9.08E-04 |
| 50 | GO:0008891: glycolate oxidase activity | 9.08E-04 |
| 51 | GO:0004791: thioredoxin-disulfide reductase activity | 9.12E-04 |
| 52 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.15E-03 |
| 53 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.15E-03 |
| 54 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.15E-03 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.18E-03 |
| 56 | GO:0005515: protein binding | 1.21E-03 |
| 57 | GO:0000293: ferric-chelate reductase activity | 1.41E-03 |
| 58 | GO:0102229: amylopectin maltohydrolase activity | 1.41E-03 |
| 59 | GO:0042578: phosphoric ester hydrolase activity | 1.41E-03 |
| 60 | GO:0031177: phosphopantetheine binding | 1.41E-03 |
| 61 | GO:0004462: lactoylglutathione lyase activity | 1.41E-03 |
| 62 | GO:0016615: malate dehydrogenase activity | 1.41E-03 |
| 63 | GO:0005509: calcium ion binding | 1.59E-03 |
| 64 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.68E-03 |
| 65 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.68E-03 |
| 66 | GO:0016161: beta-amylase activity | 1.68E-03 |
| 67 | GO:0030060: L-malate dehydrogenase activity | 1.68E-03 |
| 68 | GO:0000035: acyl binding | 1.68E-03 |
| 69 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.83E-03 |
| 70 | GO:0009881: photoreceptor activity | 1.98E-03 |
| 71 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.29E-03 |
| 72 | GO:0008135: translation factor activity, RNA binding | 2.61E-03 |
| 73 | GO:0050661: NADP binding | 2.76E-03 |
| 74 | GO:0016491: oxidoreductase activity | 2.98E-03 |
| 75 | GO:0005198: structural molecule activity | 3.50E-03 |
| 76 | GO:0051287: NAD binding | 3.77E-03 |
| 77 | GO:0004565: beta-galactosidase activity | 4.86E-03 |
| 78 | GO:0004089: carbonate dehydratase activity | 4.86E-03 |
| 79 | GO:0003712: transcription cofactor activity | 5.71E-03 |
| 80 | GO:0051082: unfolded protein binding | 5.96E-03 |
| 81 | GO:0015035: protein disulfide oxidoreductase activity | 6.13E-03 |
| 82 | GO:0003954: NADH dehydrogenase activity | 6.61E-03 |
| 83 | GO:0004857: enzyme inhibitor activity | 6.61E-03 |
| 84 | GO:0003756: protein disulfide isomerase activity | 9.07E-03 |
| 85 | GO:0010181: FMN binding | 1.12E-02 |
| 86 | GO:0042802: identical protein binding | 1.31E-02 |
| 87 | GO:0016413: O-acetyltransferase activity | 1.54E-02 |
| 88 | GO:0003746: translation elongation factor activity | 2.30E-02 |
| 89 | GO:0003993: acid phosphatase activity | 2.37E-02 |
| 90 | GO:0015293: symporter activity | 2.99E-02 |
| 91 | GO:0016874: ligase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 1.58E-43 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 4.45E-36 |
| 4 | GO:0009507: chloroplast | 3.30E-34 |
| 5 | GO:0009941: chloroplast envelope | 1.78E-32 |
| 6 | GO:0009579: thylakoid | 9.33E-28 |
| 7 | GO:0010287: plastoglobule | 1.33E-22 |
| 8 | GO:0009570: chloroplast stroma | 4.15E-21 |
| 9 | GO:0009522: photosystem I | 3.02E-14 |
| 10 | GO:0030076: light-harvesting complex | 1.02E-11 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 6.76E-11 |
| 12 | GO:0031977: thylakoid lumen | 3.51E-10 |
| 13 | GO:0009523: photosystem II | 4.16E-10 |
| 14 | GO:0030095: chloroplast photosystem II | 1.00E-09 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 3.64E-09 |
| 16 | GO:0048046: apoplast | 7.12E-09 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 1.25E-08 |
| 18 | GO:0019898: extrinsic component of membrane | 3.10E-08 |
| 19 | GO:0009706: chloroplast inner membrane | 4.78E-06 |
| 20 | GO:0009538: photosystem I reaction center | 8.08E-05 |
| 21 | GO:0009515: granal stacked thylakoid | 1.25E-04 |
| 22 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.90E-04 |
| 23 | GO:0009569: chloroplast starch grain | 2.90E-04 |
| 24 | GO:0043036: starch grain | 2.90E-04 |
| 25 | GO:0010007: magnesium chelatase complex | 4.78E-04 |
| 26 | GO:0042651: thylakoid membrane | 4.81E-04 |
| 27 | GO:0031969: chloroplast membrane | 6.02E-04 |
| 28 | GO:0016020: membrane | 6.66E-04 |
| 29 | GO:0005960: glycine cleavage complex | 6.85E-04 |
| 30 | GO:0055035: plastid thylakoid membrane | 1.15E-03 |
| 31 | GO:0009533: chloroplast stromal thylakoid | 1.98E-03 |
| 32 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.95E-03 |
| 33 | GO:0008180: COP9 signalosome | 2.95E-03 |
| 34 | GO:0016021: integral component of membrane | 3.59E-03 |
| 35 | GO:0005623: cell | 7.66E-03 |
| 36 | GO:0010319: stromule | 1.48E-02 |
| 37 | GO:0019005: SCF ubiquitin ligase complex | 1.94E-02 |
| 38 | GO:0000502: proteasome complex | 3.40E-02 |
| 39 | GO:0022626: cytosolic ribosome | 4.94E-02 |