co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G24200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006592: ornithine biosynthetic process	0.00E+00
2	GO:0018293: protein-FAD linkage	0.00E+00
3	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
4	GO:0046292: formaldehyde metabolic process	0.00E+00
5	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
6	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
7	GO:0042430: indole-containing compound metabolic process	0.00E+00
8	GO:0006721: terpenoid metabolic process	0.00E+00
9	GO:0006069: ethanol oxidation	0.00E+00
10	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
11	GO:0055114: oxidation-reduction process	1.42E-11
12	GO:0009853: photorespiration	1.66E-09
13	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	5.47E-09
14	GO:0006099: tricarboxylic acid cycle	2.37E-06
15	GO:0045454: cell redox homeostasis	5.79E-05
16	GO:0080027: response to herbivore	1.22E-04
17	GO:0016487: farnesol metabolic process	1.93E-04
18	GO:0006481: C-terminal protein methylation	1.93E-04
19	GO:0031539: positive regulation of anthocyanin metabolic process	1.93E-04
20	GO:0006007: glucose catabolic process	1.93E-04
21	GO:0031468: nuclear envelope reassembly	1.93E-04
22	GO:0044550: secondary metabolite biosynthetic process	3.24E-04
23	GO:0009915: phloem sucrose loading	4.33E-04
24	GO:0080026: response to indolebutyric acid	4.33E-04
25	GO:0043255: regulation of carbohydrate biosynthetic process	4.33E-04
26	GO:0019441: tryptophan catabolic process to kynurenine	4.33E-04
27	GO:0009308: amine metabolic process	4.33E-04
28	GO:0097054: L-glutamate biosynthetic process	4.33E-04
29	GO:0046939: nucleotide phosphorylation	4.33E-04
30	GO:0006108: malate metabolic process	5.01E-04
31	GO:0015940: pantothenate biosynthetic process	7.06E-04
32	GO:0045793: positive regulation of cell size	7.06E-04
33	GO:0006107: oxaloacetate metabolic process	1.01E-03
34	GO:0006809: nitric oxide biosynthetic process	1.01E-03
35	GO:0009963: positive regulation of flavonoid biosynthetic process	1.01E-03
36	GO:0006537: glutamate biosynthetic process	1.01E-03
37	GO:1901332: negative regulation of lateral root development	1.01E-03
38	GO:0080024: indolebutyric acid metabolic process	1.01E-03
39	GO:0032877: positive regulation of DNA endoreduplication	1.01E-03
40	GO:0009735: response to cytokinin	1.32E-03
41	GO:0019676: ammonia assimilation cycle	1.34E-03
42	GO:0051781: positive regulation of cell division	1.34E-03
43	GO:0010387: COP9 signalosome assembly	1.34E-03
44	GO:0015846: polyamine transport	1.34E-03
45	GO:0032366: intracellular sterol transport	1.34E-03
46	GO:0010118: stomatal movement	1.40E-03
47	GO:0080022: primary root development	1.40E-03
48	GO:0018344: protein geranylgeranylation	1.70E-03
49	GO:0005513: detection of calcium ion	1.70E-03
50	GO:0006555: methionine metabolic process	2.10E-03
51	GO:0003006: developmental process involved in reproduction	2.10E-03
52	GO:0009117: nucleotide metabolic process	2.10E-03
53	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.10E-03
54	GO:0006751: glutathione catabolic process	2.10E-03
55	GO:0019509: L-methionine salvage from methylthioadenosine	2.52E-03
56	GO:0010189: vitamin E biosynthetic process	2.52E-03
57	GO:0009615: response to virus	2.67E-03
58	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.82E-03
59	GO:0000338: protein deneddylation	2.96E-03
60	GO:0050790: regulation of catalytic activity	2.96E-03
61	GO:0010044: response to aluminum ion	2.96E-03
62	GO:0006950: response to stress	3.14E-03
63	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.43E-03
64	GO:0010439: regulation of glucosinolate biosynthetic process	3.43E-03
65	GO:0048658: anther wall tapetum development	3.43E-03
66	GO:0010099: regulation of photomorphogenesis	3.93E-03
67	GO:0022900: electron transport chain	3.93E-03
68	GO:0006526: arginine biosynthetic process	3.93E-03
69	GO:0046685: response to arsenic-containing substance	4.44E-03
70	GO:0009821: alkaloid biosynthetic process	4.44E-03
71	GO:0080144: amino acid homeostasis	4.44E-03
72	GO:0000103: sulfate assimilation	5.55E-03
73	GO:0043069: negative regulation of programmed cell death	5.55E-03
74	GO:0009640: photomorphogenesis	5.66E-03
75	GO:0072593: reactive oxygen species metabolic process	6.13E-03
76	GO:0006378: mRNA polyadenylation	6.13E-03
77	GO:0006855: drug transmembrane transport	6.60E-03
78	GO:0002213: defense response to insect	6.73E-03
79	GO:0009723: response to ethylene	6.90E-03
80	GO:0006807: nitrogen compound metabolic process	7.36E-03
81	GO:0006006: glucose metabolic process	7.36E-03
82	GO:0009585: red, far-red light phototransduction	7.63E-03
83	GO:0051603: proteolysis involved in cellular protein catabolic process	7.90E-03
84	GO:0009266: response to temperature stimulus	8.01E-03
85	GO:0042343: indole glucosinolate metabolic process	8.67E-03
86	GO:0007030: Golgi organization	8.67E-03
87	GO:0010039: response to iron ion	8.67E-03
88	GO:0006096: glycolytic process	9.03E-03
89	GO:0055085: transmembrane transport	9.23E-03
90	GO:0048316: seed development	9.32E-03
91	GO:0042753: positive regulation of circadian rhythm	9.35E-03
92	GO:0006636: unsaturated fatty acid biosynthetic process	9.35E-03
93	GO:0006071: glycerol metabolic process	9.35E-03
94	GO:0006487: protein N-linked glycosylation	1.01E-02
95	GO:0009695: jasmonic acid biosynthetic process	1.08E-02
96	GO:0098542: defense response to other organism	1.15E-02
97	GO:0031408: oxylipin biosynthetic process	1.15E-02
98	GO:0009751: response to salicylic acid	1.22E-02
99	GO:0010017: red or far-red light signaling pathway	1.23E-02
100	GO:0009814: defense response, incompatible interaction	1.23E-02
101	GO:0016226: iron-sulfur cluster assembly	1.23E-02
102	GO:0019748: secondary metabolic process	1.23E-02
103	GO:0009753: response to jasmonic acid	1.35E-02
104	GO:0019722: calcium-mediated signaling	1.39E-02
105	GO:0015991: ATP hydrolysis coupled proton transport	1.55E-02
106	GO:0034220: ion transmembrane transport	1.55E-02
107	GO:0009958: positive gravitropism	1.63E-02
108	GO:0006662: glycerol ether metabolic process	1.63E-02
109	GO:0015986: ATP synthesis coupled proton transport	1.72E-02
110	GO:0061025: membrane fusion	1.72E-02
111	GO:0055072: iron ion homeostasis	1.81E-02
112	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.90E-02
113	GO:0010286: heat acclimation	2.27E-02
114	GO:0000910: cytokinesis	2.37E-02
115	GO:0009555: pollen development	2.55E-02
116	GO:0009611: response to wounding	2.62E-02
117	GO:0009627: systemic acquired resistance	2.67E-02
118	GO:0006974: cellular response to DNA damage stimulus	2.67E-02
119	GO:0009826: unidimensional cell growth	2.81E-02
120	GO:0009817: defense response to fungus, incompatible interaction	2.98E-02
121	GO:0008219: cell death	2.98E-02
122	GO:0048767: root hair elongation	3.09E-02
123	GO:0010311: lateral root formation	3.09E-02
124	GO:0006811: ion transport	3.20E-02
125	GO:0006499: N-terminal protein myristoylation	3.20E-02
126	GO:0010218: response to far red light	3.20E-02
127	GO:0007568: aging	3.31E-02
128	GO:0005975: carbohydrate metabolic process	3.45E-02
129	GO:0034599: cellular response to oxidative stress	3.64E-02
130	GO:0006631: fatty acid metabolic process	3.99E-02
131	GO:0009651: response to salt stress	4.19E-02
132	GO:0010114: response to red light	4.23E-02
133	GO:0009926: auxin polar transport	4.23E-02
134	GO:0031347: regulation of defense response	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
2	GO:0050152: omega-amidase activity	0.00E+00
3	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
6	GO:0047886: farnesol dehydrogenase activity	0.00E+00
7	GO:0008777: acetylornithine deacetylase activity	0.00E+00
8	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
9	GO:0008794: arsenate reductase (glutaredoxin) activity	1.75E-07
10	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.92E-07
11	GO:0015035: protein disulfide oxidoreductase activity	2.25E-05
12	GO:0050897: cobalt ion binding	3.81E-05
13	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	1.93E-04
14	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.93E-04
15	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.93E-04
16	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.93E-04
17	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.93E-04
18	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.93E-04
19	GO:0052595: aliphatic-amine oxidase activity	1.93E-04
20	GO:0004321: fatty-acyl-CoA synthase activity	1.93E-04
21	GO:0030611: arsenate reductase activity	1.93E-04
22	GO:0016041: glutamate synthase (ferredoxin) activity	1.93E-04
23	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.93E-04
24	GO:0045153: electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity	1.93E-04
25	GO:0005506: iron ion binding	3.69E-04
26	GO:0004129: cytochrome-c oxidase activity	3.85E-04
27	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	4.33E-04
28	GO:0004061: arylformamidase activity	4.33E-04
29	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.33E-04
30	GO:0008517: folic acid transporter activity	4.33E-04
31	GO:0015179: L-amino acid transmembrane transporter activity	4.33E-04
32	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.46E-04
33	GO:0004022: alcohol dehydrogenase (NAD) activity	5.01E-04
34	GO:0004089: carbonate dehydratase activity	5.01E-04
35	GO:0009055: electron carrier activity	6.41E-04
36	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.06E-04
37	GO:0004557: alpha-galactosidase activity	7.06E-04
38	GO:0004663: Rab geranylgeranyltransferase activity	7.06E-04
39	GO:0052692: raffinose alpha-galactosidase activity	7.06E-04
40	GO:0016491: oxidoreductase activity	7.14E-04
41	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.01E-03
42	GO:0019201: nucleotide kinase activity	1.01E-03
43	GO:0035529: NADH pyrophosphatase activity	1.01E-03
44	GO:0015203: polyamine transmembrane transporter activity	1.01E-03
45	GO:0020037: heme binding	1.06E-03
46	GO:0008234: cysteine-type peptidase activity	1.20E-03
47	GO:0010011: auxin binding	1.34E-03
48	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.34E-03
49	GO:0004576: oligosaccharyl transferase activity	1.34E-03
50	GO:0004659: prenyltransferase activity	1.34E-03
51	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.70E-03
52	GO:0004040: amidase activity	1.70E-03
53	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.70E-03
54	GO:0051538: 3 iron, 4 sulfur cluster binding	1.70E-03
55	GO:0004197: cysteine-type endopeptidase activity	1.98E-03
56	GO:0016787: hydrolase activity	2.06E-03
57	GO:0030976: thiamine pyrophosphate binding	2.10E-03
58	GO:0051117: ATPase binding	2.10E-03
59	GO:0016615: malate dehydrogenase activity	2.10E-03
60	GO:0051920: peroxiredoxin activity	2.52E-03
61	GO:0030060: L-malate dehydrogenase activity	2.52E-03
62	GO:0004017: adenylate kinase activity	2.52E-03
63	GO:0005507: copper ion binding	2.87E-03
64	GO:0019825: oxygen binding	2.87E-03
65	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.96E-03
66	GO:0016209: antioxidant activity	3.43E-03
67	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.43E-03
68	GO:0016207: 4-coumarate-CoA ligase activity	4.44E-03
69	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.44E-03
70	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.44E-03
71	GO:0015174: basic amino acid transmembrane transporter activity	4.99E-03
72	GO:0047617: acyl-CoA hydrolase activity	4.99E-03
73	GO:0016844: strictosidine synthase activity	4.99E-03
74	GO:0016788: hydrolase activity, acting on ester bonds	5.87E-03
75	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.13E-03
76	GO:0008559: xenobiotic-transporting ATPase activity	6.13E-03
77	GO:0015198: oligopeptide transporter activity	6.73E-03
78	GO:0008131: primary amine oxidase activity	8.01E-03
79	GO:0008061: chitin binding	8.67E-03
80	GO:0004725: protein tyrosine phosphatase activity	9.35E-03
81	GO:0043130: ubiquitin binding	1.01E-02
82	GO:0051536: iron-sulfur cluster binding	1.01E-02
83	GO:0004540: ribonuclease activity	1.15E-02
84	GO:0022891: substrate-specific transmembrane transporter activity	1.31E-02
85	GO:0047134: protein-disulfide reductase activity	1.47E-02
86	GO:0046872: metal ion binding	1.58E-02
87	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.63E-02
88	GO:0004791: thioredoxin-disulfide reductase activity	1.72E-02
89	GO:0050662: coenzyme binding	1.72E-02
90	GO:0015297: antiporter activity	1.80E-02
91	GO:0004872: receptor activity	1.81E-02
92	GO:0048038: quinone binding	1.90E-02
93	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.08E-02
94	GO:0008237: metallopeptidase activity	2.27E-02
95	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.40E-02
96	GO:0015250: water channel activity	2.47E-02
97	GO:0004806: triglyceride lipase activity	2.77E-02
98	GO:0030247: polysaccharide binding	2.77E-02
99	GO:0004601: peroxidase activity	2.92E-02
100	GO:0015238: drug transmembrane transporter activity	3.09E-02
101	GO:0004222: metalloendopeptidase activity	3.20E-02
102	GO:0030145: manganese ion binding	3.31E-02
103	GO:0050661: NADP binding	3.87E-02
104	GO:0051539: 4 iron, 4 sulfur cluster binding	3.87E-02
105	GO:0004185: serine-type carboxypeptidase activity	4.23E-02
106	GO:0051537: 2 iron, 2 sulfur cluster binding	4.47E-02
107	GO:0005198: structural molecule activity	4.59E-02
108	GO:0015293: symporter activity	4.59E-02
109	GO:0051287: NAD binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0005747: mitochondrial respiratory chain complex I	4.43E-18
3	GO:0045271: respiratory chain complex I	2.09E-12
4	GO:0005773: vacuole	1.31E-09
5	GO:0031966: mitochondrial membrane	1.01E-08
6	GO:0045273: respiratory chain complex II	2.63E-06
7	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.63E-06
8	GO:0005758: mitochondrial intermembrane space	4.21E-05
9	GO:0005783: endoplasmic reticulum	1.87E-04
10	GO:0005774: vacuolar membrane	2.02E-04
11	GO:0005739: mitochondrion	3.33E-04
12	GO:0000325: plant-type vacuole	4.74E-04
13	GO:0005750: mitochondrial respiratory chain complex III	5.65E-04
14	GO:0005764: lysosome	5.65E-04
15	GO:0016020: membrane	8.15E-04
16	GO:0005849: mRNA cleavage factor complex	1.01E-03
17	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.01E-03
18	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.34E-03
19	GO:0055035: plastid thylakoid membrane	1.70E-03
20	GO:0005746: mitochondrial respiratory chain	1.70E-03
21	GO:0008250: oligosaccharyltransferase complex	1.70E-03
22	GO:0005777: peroxisome	1.97E-03
23	GO:0031463: Cul3-RING ubiquitin ligase complex	2.10E-03
24	GO:0005759: mitochondrial matrix	2.92E-03
25	GO:0005615: extracellular space	3.80E-03
26	GO:0008180: COP9 signalosome	4.44E-03
27	GO:0005740: mitochondrial envelope	5.55E-03
28	GO:0009536: plastid	7.60E-03
29	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.67E-03
30	GO:0070469: respiratory chain	1.08E-02
31	GO:0005788: endoplasmic reticulum lumen	2.57E-02
32	GO:0005886: plasma membrane	2.87E-02
33	GO:0005829: cytosol	3.47E-02
34	GO:0031969: chloroplast membrane	3.62E-02
35	GO:0005794: Golgi apparatus	4.02E-02
36	GO:0048046: apoplast	4.77E-02