Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G22890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0055091: phospholipid homeostasis0.00E+00
2GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
3GO:0010412: mannan metabolic process0.00E+00
4GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
5GO:0071289: cellular response to nickel ion0.00E+00
6GO:0006203: dGTP catabolic process0.00E+00
7GO:0070328: triglyceride homeostasis0.00E+00
8GO:0034775: glutathione transmembrane transport0.00E+00
9GO:0010200: response to chitin3.95E-09
10GO:0009873: ethylene-activated signaling pathway9.67E-07
11GO:0042344: indole glucosinolate catabolic process2.02E-05
12GO:0015700: arsenite transport4.45E-05
13GO:0052544: defense response by callose deposition in cell wall5.32E-05
14GO:0006811: ion transport1.78E-04
15GO:0035435: phosphate ion transmembrane transport1.78E-04
16GO:0006955: immune response3.12E-04
17GO:0051180: vitamin transport3.57E-04
18GO:0030974: thiamine pyrophosphate transport3.57E-04
19GO:0009865: pollen tube adhesion3.57E-04
20GO:0090421: embryonic meristem initiation3.57E-04
21GO:1902265: abscisic acid homeostasis3.57E-04
22GO:0046938: phytochelatin biosynthetic process3.57E-04
23GO:2000070: regulation of response to water deprivation3.92E-04
24GO:0098656: anion transmembrane transport5.76E-04
25GO:0046685: response to arsenic-containing substance5.76E-04
26GO:0006355: regulation of transcription, DNA-templated5.83E-04
27GO:2000280: regulation of root development6.80E-04
28GO:0019760: glucosinolate metabolic process6.92E-04
29GO:0006351: transcription, DNA-templated7.32E-04
30GO:0015893: drug transport7.77E-04
31GO:0052542: defense response by callose deposition7.77E-04
32GO:0015786: UDP-glucose transport7.77E-04
33GO:1901679: nucleotide transmembrane transport7.77E-04
34GO:0010507: negative regulation of autophagy7.77E-04
35GO:0015709: thiosulfate transport7.77E-04
36GO:0071422: succinate transmembrane transport7.77E-04
37GO:0031407: oxylipin metabolic process7.77E-04
38GO:0010289: homogalacturonan biosynthetic process7.77E-04
39GO:0055088: lipid homeostasis7.77E-04
40GO:0006898: receptor-mediated endocytosis7.77E-04
41GO:0030148: sphingolipid biosynthetic process9.13E-04
42GO:0080168: abscisic acid transport1.26E-03
43GO:0080121: AMP transport1.26E-03
44GO:0046786: viral replication complex formation and maintenance1.26E-03
45GO:0044210: 'de novo' CTP biosynthetic process1.26E-03
46GO:0016045: detection of bacterium1.26E-03
47GO:0010359: regulation of anion channel activity1.26E-03
48GO:0090630: activation of GTPase activity1.26E-03
49GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.26E-03
50GO:0015783: GDP-fucose transport1.26E-03
51GO:0055089: fatty acid homeostasis1.81E-03
52GO:0010371: regulation of gibberellin biosynthetic process1.81E-03
53GO:0015729: oxaloacetate transport1.81E-03
54GO:0072334: UDP-galactose transmembrane transport1.81E-03
55GO:0080170: hydrogen peroxide transmembrane transport1.81E-03
56GO:0006839: mitochondrial transport1.92E-03
57GO:0009695: jasmonic acid biosynthetic process2.03E-03
58GO:0045490: pectin catabolic process2.16E-03
59GO:0031408: oxylipin biosynthetic process2.23E-03
60GO:0009611: response to wounding2.26E-03
61GO:0015867: ATP transport2.44E-03
62GO:1902347: response to strigolactone2.44E-03
63GO:0009687: abscisic acid metabolic process2.44E-03
64GO:0046355: mannan catabolic process2.44E-03
65GO:0022622: root system development2.44E-03
66GO:0006470: protein dephosphorylation2.66E-03
67GO:0001944: vasculature development2.66E-03
68GO:0009751: response to salicylic acid2.68E-03
69GO:0006656: phosphatidylcholine biosynthetic process3.11E-03
70GO:0045487: gibberellin catabolic process3.11E-03
71GO:0006873: cellular ion homeostasis3.11E-03
72GO:0048497: maintenance of floral organ identity3.11E-03
73GO:0006665: sphingolipid metabolic process3.11E-03
74GO:0032957: inositol trisphosphate metabolic process3.11E-03
75GO:0009247: glycolipid biosynthetic process3.11E-03
76GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.11E-03
77GO:0071423: malate transmembrane transport3.11E-03
78GO:0047484: regulation of response to osmotic stress3.85E-03
79GO:1900425: negative regulation of defense response to bacterium3.85E-03
80GO:0010337: regulation of salicylic acid metabolic process3.85E-03
81GO:0006751: glutathione catabolic process3.85E-03
82GO:0015866: ADP transport3.85E-03
83GO:0006891: intra-Golgi vesicle-mediated transport4.50E-03
84GO:2000033: regulation of seed dormancy process4.64E-03
85GO:0098655: cation transmembrane transport4.64E-03
86GO:1901001: negative regulation of response to salt stress4.64E-03
87GO:0042545: cell wall modification4.95E-03
88GO:0009624: response to nematode5.14E-03
89GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway5.48E-03
90GO:0032880: regulation of protein localization5.48E-03
91GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.48E-03
92GO:0010161: red light signaling pathway5.48E-03
93GO:0008272: sulfate transport5.48E-03
94GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.37E-03
95GO:0019375: galactolipid biosynthetic process6.37E-03
96GO:0007155: cell adhesion6.37E-03
97GO:0009819: drought recovery6.37E-03
98GO:0009880: embryonic pattern specification7.30E-03
99GO:0016049: cell growth8.09E-03
100GO:0001708: cell fate specification8.29E-03
101GO:0009790: embryo development8.35E-03
102GO:0048767: root hair elongation8.94E-03
103GO:0007346: regulation of mitotic cell cycle9.31E-03
104GO:0043067: regulation of programmed cell death9.31E-03
105GO:0048268: clathrin coat assembly9.31E-03
106GO:0006952: defense response9.81E-03
107GO:0055062: phosphate ion homeostasis1.04E-02
108GO:0009641: shade avoidance1.04E-02
109GO:0019538: protein metabolic process1.04E-02
110GO:0018119: peptidyl-cysteine S-nitrosylation1.15E-02
111GO:0010015: root morphogenesis1.15E-02
112GO:0009682: induced systemic resistance1.15E-02
113GO:0010105: negative regulation of ethylene-activated signaling pathway1.27E-02
114GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.27E-02
115GO:0010468: regulation of gene expression1.30E-02
116GO:0030048: actin filament-based movement1.39E-02
117GO:0050826: response to freezing1.39E-02
118GO:0018107: peptidyl-threonine phosphorylation1.39E-02
119GO:2000012: regulation of auxin polar transport1.39E-02
120GO:0051707: response to other organism1.40E-02
121GO:0009737: response to abscisic acid1.45E-02
122GO:0048467: gynoecium development1.51E-02
123GO:0006855: drug transmembrane transport1.63E-02
124GO:0071732: cellular response to nitric oxide1.64E-02
125GO:0010030: positive regulation of seed germination1.64E-02
126GO:0070588: calcium ion transmembrane transport1.64E-02
127GO:0009969: xyloglucan biosynthetic process1.64E-02
128GO:0042538: hyperosmotic salinity response1.76E-02
129GO:0009833: plant-type primary cell wall biogenesis1.77E-02
130GO:0006810: transport1.82E-02
131GO:0010187: negative regulation of seed germination1.90E-02
132GO:2000377: regulation of reactive oxygen species metabolic process1.90E-02
133GO:0009863: salicylic acid mediated signaling pathway1.90E-02
134GO:0006970: response to osmotic stress1.98E-02
135GO:0007017: microtubule-based process2.04E-02
136GO:0051321: meiotic cell cycle2.18E-02
137GO:0009269: response to desiccation2.18E-02
138GO:0006468: protein phosphorylation2.32E-02
139GO:0080092: regulation of pollen tube growth2.33E-02
140GO:0030245: cellulose catabolic process2.33E-02
141GO:0071369: cellular response to ethylene stimulus2.48E-02
142GO:0009686: gibberellin biosynthetic process2.48E-02
143GO:0010091: trichome branching2.63E-02
144GO:0010584: pollen exine formation2.63E-02
145GO:0048443: stamen development2.63E-02
146GO:0019722: calcium-mediated signaling2.63E-02
147GO:0008284: positive regulation of cell proliferation2.79E-02
148GO:0042147: retrograde transport, endosome to Golgi2.79E-02
149GO:0030154: cell differentiation2.92E-02
150GO:0042631: cellular response to water deprivation2.95E-02
151GO:0000398: mRNA splicing, via spliceosome3.10E-02
152GO:0009958: positive gravitropism3.11E-02
153GO:0048868: pollen tube development3.11E-02
154GO:0009960: endosperm development3.11E-02
155GO:0009749: response to glucose3.44E-02
156GO:0008654: phospholipid biosynthetic process3.44E-02
157GO:0010183: pollen tube guidance3.44E-02
158GO:0010193: response to ozone3.61E-02
159GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.61E-02
160GO:1901657: glycosyl compound metabolic process3.96E-02
161GO:0071281: cellular response to iron ion3.96E-02
162GO:0009639: response to red or far red light4.14E-02
163GO:0007267: cell-cell signaling4.32E-02
164GO:0010150: leaf senescence4.63E-02
165GO:0010027: thylakoid membrane organization4.69E-02
166GO:0009816: defense response to bacterium, incompatible interaction4.88E-02
167GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.88E-02
168GO:0010029: regulation of seed germination4.88E-02
RankGO TermAdjusted P value
1GO:0008419: RNA lariat debranching enzyme activity0.00E+00
2GO:0008413: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity0.00E+00
3GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
4GO:0019177: dihydroneopterin triphosphate pyrophosphohydrolase activity0.00E+00
5GO:0035539: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity0.00E+00
6GO:0017048: Rho GTPase binding0.00E+00
7GO:0016629: 12-oxophytodienoate reductase activity5.76E-06
8GO:0003883: CTP synthase activity4.45E-05
9GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity4.45E-05
10GO:0043565: sequence-specific DNA binding2.07E-04
11GO:0090440: abscisic acid transporter activity3.57E-04
12GO:0071992: phytochelatin transmembrane transporter activity3.57E-04
13GO:0090422: thiamine pyrophosphate transporter activity3.57E-04
14GO:0004105: choline-phosphate cytidylyltransferase activity3.57E-04
15GO:0046870: cadmium ion binding3.57E-04
16GO:0015446: ATPase-coupled arsenite transmembrane transporter activity3.57E-04
17GO:0003700: transcription factor activity, sequence-specific DNA binding6.40E-04
18GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.47E-04
19GO:0015117: thiosulfate transmembrane transporter activity7.77E-04
20GO:0045140: inositol phosphoceramide synthase activity7.77E-04
21GO:1901677: phosphate transmembrane transporter activity7.77E-04
22GO:0017022: myosin binding7.77E-04
23GO:0004103: choline kinase activity7.77E-04
24GO:0001047: core promoter binding7.77E-04
25GO:0017040: ceramidase activity7.77E-04
26GO:0015105: arsenite transmembrane transporter activity7.77E-04
27GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity7.77E-04
28GO:0044212: transcription regulatory region DNA binding9.06E-04
29GO:0003840: gamma-glutamyltransferase activity1.26E-03
30GO:0004758: serine C-palmitoyltransferase activity1.26E-03
31GO:0036374: glutathione hydrolase activity1.26E-03
32GO:0046423: allene-oxide cyclase activity1.26E-03
33GO:0004383: guanylate cyclase activity1.26E-03
34GO:0005457: GDP-fucose transmembrane transporter activity1.26E-03
35GO:0047325: inositol tetrakisphosphate 1-kinase activity1.26E-03
36GO:0005310: dicarboxylic acid transmembrane transporter activity1.26E-03
37GO:0015141: succinate transmembrane transporter activity1.26E-03
38GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.26E-03
39GO:0008083: growth factor activity1.33E-03
40GO:0015131: oxaloacetate transmembrane transporter activity1.81E-03
41GO:0035250: UDP-galactosyltransferase activity1.81E-03
42GO:0005460: UDP-glucose transmembrane transporter activity1.81E-03
43GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.81E-03
44GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.81E-03
45GO:0001653: peptide receptor activity1.81E-03
46GO:0033843: xyloglucan 6-xylosyltransferase activity1.81E-03
47GO:0015297: antiporter activity2.02E-03
48GO:0004722: protein serine/threonine phosphatase activity2.24E-03
49GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.44E-03
50GO:0016985: mannan endo-1,4-beta-mannosidase activity2.44E-03
51GO:0080122: AMP transmembrane transporter activity3.11E-03
52GO:0004623: phospholipase A2 activity3.11E-03
53GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.11E-03
54GO:0010294: abscisic acid glucosyltransferase activity3.11E-03
55GO:0005459: UDP-galactose transmembrane transporter activity3.11E-03
56GO:0045330: aspartyl esterase activity3.73E-03
57GO:0000210: NAD+ diphosphatase activity3.85E-03
58GO:0019137: thioglucosidase activity3.85E-03
59GO:0010181: FMN binding3.92E-03
60GO:0005347: ATP transmembrane transporter activity4.64E-03
61GO:0015217: ADP transmembrane transporter activity4.64E-03
62GO:0030599: pectinesterase activity4.76E-03
63GO:0004143: diacylglycerol kinase activity5.48E-03
64GO:0015140: malate transmembrane transporter activity5.48E-03
65GO:0008308: voltage-gated anion channel activity7.30E-03
66GO:0004721: phosphoprotein phosphatase activity7.67E-03
67GO:0102483: scopolin beta-glucosidase activity7.67E-03
68GO:0046872: metal ion binding8.11E-03
69GO:0000989: transcription factor activity, transcription factor binding8.29E-03
70GO:0005096: GTPase activator activity8.94E-03
71GO:0015238: drug transmembrane transporter activity8.94E-03
72GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.45E-03
73GO:0005545: 1-phosphatidylinositol binding1.04E-02
74GO:0004713: protein tyrosine kinase activity1.04E-02
75GO:0008422: beta-glucosidase activity1.18E-02
76GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.22E-02
77GO:0016301: kinase activity1.26E-02
78GO:0015116: sulfate transmembrane transporter activity1.27E-02
79GO:0005315: inorganic phosphate transmembrane transporter activity1.39E-02
80GO:0005262: calcium channel activity1.39E-02
81GO:0015114: phosphate ion transmembrane transporter activity1.39E-02
82GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.51E-02
83GO:0003774: motor activity1.51E-02
84GO:0017025: TBP-class protein binding1.64E-02
85GO:0004857: enzyme inhibitor activity1.90E-02
86GO:0004707: MAP kinase activity2.18E-02
87GO:0030570: pectate lyase activity2.48E-02
88GO:0008514: organic anion transmembrane transporter activity2.63E-02
89GO:0030276: clathrin binding3.11E-02
90GO:0004674: protein serine/threonine kinase activity3.66E-02
91GO:0005200: structural constituent of cytoskeleton4.32E-02
92GO:0016722: oxidoreductase activity, oxidizing metal ions4.32E-02
93GO:0046910: pectinesterase inhibitor activity4.32E-02
94GO:0015250: water channel activity4.69E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle3.57E-04
2GO:0030133: transport vesicle7.77E-04
3GO:0045177: apical part of cell1.81E-03
4GO:0045298: tubulin complex8.29E-03
5GO:0016604: nuclear body9.31E-03
6GO:0005743: mitochondrial inner membrane9.47E-03
7GO:0005618: cell wall9.69E-03
8GO:0005938: cell cortex1.39E-02
9GO:0046658: anchored component of plasma membrane1.48E-02
10GO:0005795: Golgi stack1.64E-02
11GO:0005905: clathrin-coated pit2.18E-02
12GO:0016607: nuclear speck2.31E-02
13GO:0030136: clathrin-coated vesicle2.79E-02
14GO:0005770: late endosome3.11E-02
15GO:0000139: Golgi membrane4.17E-02
16GO:0005802: trans-Golgi network4.94E-02
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Gene type



Gene DE type