co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G22360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0046292: formaldehyde metabolic process	0.00E+00
4	GO:0043171: peptide catabolic process	0.00E+00
5	GO:0006069: ethanol oxidation	0.00E+00
6	GO:0006721: terpenoid metabolic process	0.00E+00
7	GO:0006511: ubiquitin-dependent protein catabolic process	5.73E-10
8	GO:0046686: response to cadmium ion	5.88E-07
9	GO:0010043: response to zinc ion	1.01E-06
10	GO:0015991: ATP hydrolysis coupled proton transport	2.68E-06
11	GO:0051603: proteolysis involved in cellular protein catabolic process	6.01E-06
12	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.69E-04
13	GO:0016487: farnesol metabolic process	1.69E-04
14	GO:0006007: glucose catabolic process	1.69E-04
15	GO:0031468: nuclear envelope reassembly	1.69E-04
16	GO:0010265: SCF complex assembly	1.69E-04
17	GO:0061014: positive regulation of mRNA catabolic process	1.69E-04
18	GO:0006212: uracil catabolic process	3.83E-04
19	GO:0043255: regulation of carbohydrate biosynthetic process	3.83E-04
20	GO:0019388: galactose catabolic process	3.83E-04
21	GO:0030010: establishment of cell polarity	3.83E-04
22	GO:0019483: beta-alanine biosynthetic process	3.83E-04
23	GO:0006432: phenylalanyl-tRNA aminoacylation	3.83E-04
24	GO:0080026: response to indolebutyric acid	3.83E-04
25	GO:1990069: stomatal opening	3.83E-04
26	GO:0006807: nitrogen compound metabolic process	4.18E-04
27	GO:0006108: malate metabolic process	4.18E-04
28	GO:0006631: fatty acid metabolic process	5.23E-04
29	GO:0007030: Golgi organization	5.27E-04
30	GO:0009926: auxin polar transport	5.79E-04
31	GO:0030835: negative regulation of actin filament depolymerization	6.25E-04
32	GO:0045793: positive regulation of cell size	6.25E-04
33	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	6.25E-04
34	GO:0046168: glycerol-3-phosphate catabolic process	6.25E-04
35	GO:0046034: ATP metabolic process	6.25E-04
36	GO:0080121: AMP transport	6.25E-04
37	GO:0005975: carbohydrate metabolic process	6.40E-04
38	GO:0009826: unidimensional cell growth	7.68E-04
39	GO:0015992: proton transport	7.83E-04
40	GO:0061077: chaperone-mediated protein folding	7.83E-04
41	GO:0032877: positive regulation of DNA endoreduplication	8.93E-04
42	GO:0006166: purine ribonucleoside salvage	8.93E-04
43	GO:0006107: oxaloacetate metabolic process	8.93E-04
44	GO:0006072: glycerol-3-phosphate metabolic process	8.93E-04
45	GO:0010587: miRNA catabolic process	8.93E-04
46	GO:0010255: glucose mediated signaling pathway	8.93E-04
47	GO:0006516: glycoprotein catabolic process	8.93E-04
48	GO:0009590: detection of gravity	8.93E-04
49	GO:0006168: adenine salvage	8.93E-04
50	GO:0080024: indolebutyric acid metabolic process	8.93E-04
51	GO:0001676: long-chain fatty acid metabolic process	8.93E-04
52	GO:0009755: hormone-mediated signaling pathway	1.18E-03
53	GO:0051781: positive regulation of cell division	1.18E-03
54	GO:0010363: regulation of plant-type hypersensitive response	1.18E-03
55	GO:0006221: pyrimidine nucleotide biosynthetic process	1.18E-03
56	GO:0015867: ATP transport	1.18E-03
57	GO:0044205: 'de novo' UMP biosynthetic process	1.18E-03
58	GO:0032366: intracellular sterol transport	1.18E-03
59	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.18E-03
60	GO:0015986: ATP synthesis coupled proton transport	1.35E-03
61	GO:0009229: thiamine diphosphate biosynthetic process	1.50E-03
62	GO:0044209: AMP salvage	1.50E-03
63	GO:0009697: salicylic acid biosynthetic process	1.50E-03
64	GO:0098719: sodium ion import across plasma membrane	1.50E-03
65	GO:0036065: fucosylation	1.50E-03
66	GO:0006564: L-serine biosynthetic process	1.50E-03
67	GO:0015866: ADP transport	1.85E-03
68	GO:0009228: thiamine biosynthetic process	1.85E-03
69	GO:0010286: heat acclimation	1.98E-03
70	GO:0009612: response to mechanical stimulus	2.22E-03
71	GO:0009627: systemic acquired resistance	2.48E-03
72	GO:0010044: response to aluminum ion	2.61E-03
73	GO:0071446: cellular response to salicylic acid stimulus	2.61E-03
74	GO:0051693: actin filament capping	2.61E-03
75	GO:0070370: cellular heat acclimation	2.61E-03
76	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.61E-03
77	GO:0040029: regulation of gene expression, epigenetic	3.02E-03
78	GO:0005978: glycogen biosynthetic process	3.02E-03
79	GO:0006402: mRNA catabolic process	3.02E-03
80	GO:0009690: cytokinin metabolic process	3.02E-03
81	GO:0006491: N-glycan processing	3.02E-03
82	GO:0000028: ribosomal small subunit assembly	3.02E-03
83	GO:0009832: plant-type cell wall biogenesis	3.03E-03
84	GO:0043562: cellular response to nitrogen levels	3.46E-03
85	GO:0009880: embryonic pattern specification	3.46E-03
86	GO:0006526: arginine biosynthetic process	3.46E-03
87	GO:0010204: defense response signaling pathway, resistance gene-independent	3.46E-03
88	GO:0009853: photorespiration	3.65E-03
89	GO:0045087: innate immune response	3.65E-03
90	GO:0006099: tricarboxylic acid cycle	3.81E-03
91	GO:0042742: defense response to bacterium	3.82E-03
92	GO:0009060: aerobic respiration	3.91E-03
93	GO:0009821: alkaloid biosynthetic process	3.91E-03
94	GO:0006754: ATP biosynthetic process	3.91E-03
95	GO:0051453: regulation of intracellular pH	4.38E-03
96	GO:0042761: very long-chain fatty acid biosynthetic process	4.38E-03
97	GO:0006896: Golgi to vacuole transport	4.87E-03
98	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.87E-03
99	GO:0000103: sulfate assimilation	4.87E-03
100	GO:0048229: gametophyte development	5.38E-03
101	GO:0030148: sphingolipid biosynthetic process	5.38E-03
102	GO:0072593: reactive oxygen species metabolic process	5.38E-03
103	GO:0006094: gluconeogenesis	6.46E-03
104	GO:0010102: lateral root morphogenesis	6.46E-03
105	GO:0006006: glucose metabolic process	6.46E-03
106	GO:0007034: vacuolar transport	7.02E-03
107	GO:0045454: cell redox homeostasis	7.45E-03
108	GO:0006096: glycolytic process	7.47E-03
109	GO:0009969: xyloglucan biosynthetic process	7.60E-03
110	GO:0006071: glycerol metabolic process	8.20E-03
111	GO:0009116: nucleoside metabolic process	8.81E-03
112	GO:0006338: chromatin remodeling	8.81E-03
113	GO:0051017: actin filament bundle assembly	8.81E-03
114	GO:0006508: proteolysis	9.09E-03
115	GO:0018105: peptidyl-serine phosphorylation	9.27E-03
116	GO:0048364: root development	1.03E-02
117	GO:0055114: oxidation-reduction process	1.07E-02
118	GO:0019748: secondary metabolic process	1.08E-02
119	GO:0009651: response to salt stress	1.08E-02
120	GO:0001944: vasculature development	1.14E-02
121	GO:0006012: galactose metabolic process	1.14E-02
122	GO:0009058: biosynthetic process	1.19E-02
123	GO:0010051: xylem and phloem pattern formation	1.36E-02
124	GO:0010118: stomatal movement	1.36E-02
125	GO:0042391: regulation of membrane potential	1.36E-02
126	GO:0034220: ion transmembrane transport	1.36E-02
127	GO:0000413: protein peptidyl-prolyl isomerization	1.36E-02
128	GO:0010182: sugar mediated signaling pathway	1.43E-02
129	GO:0006520: cellular amino acid metabolic process	1.43E-02
130	GO:0010154: fruit development	1.43E-02
131	GO:0006662: glycerol ether metabolic process	1.43E-02
132	GO:0061025: membrane fusion	1.51E-02
133	GO:0006814: sodium ion transport	1.51E-02
134	GO:0006623: protein targeting to vacuole	1.58E-02
135	GO:0048825: cotyledon development	1.58E-02
136	GO:0009749: response to glucose	1.58E-02
137	GO:0019252: starch biosynthetic process	1.58E-02
138	GO:0080156: mitochondrial mRNA modification	1.66E-02
139	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.66E-02
140	GO:0010193: response to ozone	1.66E-02
141	GO:0009630: gravitropism	1.74E-02
142	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.75E-02
143	GO:0009735: response to cytokinin	1.80E-02
144	GO:1901657: glycosyl compound metabolic process	1.82E-02
145	GO:0071805: potassium ion transmembrane transport	1.99E-02
146	GO:0000910: cytokinesis	2.07E-02
147	GO:0009615: response to virus	2.16E-02
148	GO:0009409: response to cold	2.21E-02
149	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.24E-02
150	GO:0006974: cellular response to DNA damage stimulus	2.33E-02
151	GO:0008219: cell death	2.61E-02
152	GO:0009817: defense response to fungus, incompatible interaction	2.61E-02
153	GO:0048767: root hair elongation	2.70E-02
154	GO:0055085: transmembrane transport	2.72E-02
155	GO:0006499: N-terminal protein myristoylation	2.79E-02
156	GO:0006811: ion transport	2.79E-02
157	GO:0009723: response to ethylene	2.80E-02
158	GO:0048527: lateral root development	2.89E-02
159	GO:0010119: regulation of stomatal movement	2.89E-02
160	GO:0006865: amino acid transport	2.99E-02
161	GO:0034599: cellular response to oxidative stress	3.18E-02
162	GO:0046777: protein autophosphorylation	3.21E-02
163	GO:0006839: mitochondrial transport	3.38E-02
164	GO:0009636: response to toxic substance	4.01E-02
165	GO:0016042: lipid catabolic process	4.29E-02
166	GO:0006812: cation transport	4.34E-02
167	GO:0009751: response to salicylic acid	4.35E-02
168	GO:0009809: lignin biosynthetic process	4.57E-02
169	GO:0006486: protein glycosylation	4.57E-02
170	GO:0009736: cytokinin-activated signaling pathway	4.57E-02
171	GO:0071555: cell wall organization	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
2	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
3	GO:0003837: beta-ureidopropionase activity	0.00E+00
4	GO:0050152: omega-amidase activity	0.00E+00
5	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
6	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
7	GO:0050334: thiaminase activity	0.00E+00
8	GO:0004151: dihydroorotase activity	0.00E+00
9	GO:0047886: farnesol dehydrogenase activity	0.00E+00
10	GO:0008777: acetylornithine deacetylase activity	0.00E+00
11	GO:0004298: threonine-type endopeptidase activity	6.18E-24
12	GO:0008233: peptidase activity	8.54E-12
13	GO:0052692: raffinose alpha-galactosidase activity	5.12E-06
14	GO:0004557: alpha-galactosidase activity	5.12E-06
15	GO:0016229: steroid dehydrogenase activity	1.69E-04
16	GO:0004347: glucose-6-phosphate isomerase activity	1.69E-04
17	GO:0010013: N-1-naphthylphthalamic acid binding	1.69E-04
18	GO:0004560: alpha-L-fucosidase activity	1.69E-04
19	GO:0070401: NADP+ binding	1.69E-04
20	GO:0070006: metalloaminopeptidase activity	1.69E-04
21	GO:0047560: 3-dehydrosphinganine reductase activity	1.69E-04
22	GO:0010209: vacuolar sorting signal binding	1.69E-04
23	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.95E-04
24	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.19E-04
25	GO:0004617: phosphoglycerate dehydrogenase activity	3.83E-04
26	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	3.83E-04
27	GO:1990585: hydroxyproline O-arabinosyltransferase activity	3.83E-04
28	GO:0004534: 5'-3' exoribonuclease activity	3.83E-04
29	GO:0004614: phosphoglucomutase activity	3.83E-04
30	GO:0004826: phenylalanine-tRNA ligase activity	3.83E-04
31	GO:0005507: copper ion binding	4.98E-04
32	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	6.25E-04
33	GO:0005528: FK506 binding	6.49E-04
34	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.03E-04
35	GO:0003999: adenine phosphoribosyltransferase activity	8.93E-04
36	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.08E-03
37	GO:0015368: calcium:cation antiporter activity	1.18E-03
38	GO:0010011: auxin binding	1.18E-03
39	GO:0008409: 5'-3' exonuclease activity	1.18E-03
40	GO:0015369: calcium:proton antiporter activity	1.18E-03
41	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.18E-03
42	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.18E-03
43	GO:0042277: peptide binding	1.18E-03
44	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.26E-03
45	GO:0015035: protein disulfide oxidoreductase activity	1.35E-03
46	GO:0080122: AMP transmembrane transporter activity	1.50E-03
47	GO:0004040: amidase activity	1.50E-03
48	GO:0016615: malate dehydrogenase activity	1.85E-03
49	GO:0051117: ATPase binding	1.85E-03
50	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.85E-03
51	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.85E-03
52	GO:0015217: ADP transmembrane transporter activity	2.22E-03
53	GO:0102391: decanoate--CoA ligase activity	2.22E-03
54	GO:0030060: L-malate dehydrogenase activity	2.22E-03
55	GO:0005261: cation channel activity	2.22E-03
56	GO:0005347: ATP transmembrane transporter activity	2.22E-03
57	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.48E-03
58	GO:0004467: long-chain fatty acid-CoA ligase activity	2.61E-03
59	GO:0004683: calmodulin-dependent protein kinase activity	2.61E-03
60	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.61E-03
61	GO:0004034: aldose 1-epimerase activity	3.02E-03
62	GO:0004033: aldo-keto reductase (NADP) activity	3.02E-03
63	GO:0015491: cation:cation antiporter activity	3.02E-03
64	GO:0008417: fucosyltransferase activity	3.91E-03
65	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.91E-03
66	GO:0000989: transcription factor activity, transcription factor binding	3.91E-03
67	GO:0016844: strictosidine synthase activity	4.38E-03
68	GO:0016788: hydrolase activity, acting on ester bonds	4.62E-03
69	GO:0004177: aminopeptidase activity	5.38E-03
70	GO:0008559: xenobiotic-transporting ATPase activity	5.38E-03
71	GO:0015386: potassium:proton antiporter activity	5.38E-03
72	GO:0008794: arsenate reductase (glutaredoxin) activity	5.38E-03
73	GO:0051287: NAD binding	5.68E-03
74	GO:0000049: tRNA binding	5.91E-03
75	GO:0004022: alcohol dehydrogenase (NAD) activity	6.46E-03
76	GO:0004175: endopeptidase activity	7.02E-03
77	GO:0008266: poly(U) RNA binding	7.02E-03
78	GO:0030552: cAMP binding	7.60E-03
79	GO:0030553: cGMP binding	7.60E-03
80	GO:0043130: ubiquitin binding	8.81E-03
81	GO:0005516: calmodulin binding	8.96E-03
82	GO:0005216: ion channel activity	9.44E-03
83	GO:0008324: cation transmembrane transporter activity	9.44E-03
84	GO:0009055: electron carrier activity	1.06E-02
85	GO:0047134: protein-disulfide reductase activity	1.28E-02
86	GO:0005249: voltage-gated potassium channel activity	1.36E-02
87	GO:0004402: histone acetyltransferase activity	1.36E-02
88	GO:0030551: cyclic nucleotide binding	1.36E-02
89	GO:0004791: thioredoxin-disulfide reductase activity	1.51E-02
90	GO:0050662: coenzyme binding	1.51E-02
91	GO:0004872: receptor activity	1.58E-02
92	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.66E-02
93	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.82E-02
94	GO:0051015: actin filament binding	1.82E-02
95	GO:0015385: sodium:proton antiporter activity	1.82E-02
96	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.99E-02
97	GO:0008237: metallopeptidase activity	1.99E-02
98	GO:0000166: nucleotide binding	2.01E-02
99	GO:0016597: amino acid binding	2.07E-02
100	GO:0015250: water channel activity	2.16E-02
101	GO:0000287: magnesium ion binding	2.37E-02
102	GO:0102483: scopolin beta-glucosidase activity	2.42E-02
103	GO:0030145: manganese ion binding	2.89E-02
104	GO:0050897: cobalt ion binding	2.89E-02
105	GO:0003697: single-stranded DNA binding	3.08E-02
106	GO:0003993: acid phosphatase activity	3.18E-02
107	GO:0008422: beta-glucosidase activity	3.28E-02
108	GO:0052689: carboxylic ester hydrolase activity	3.31E-02
109	GO:0051539: 4 iron, 4 sulfur cluster binding	3.38E-02
110	GO:0004185: serine-type carboxypeptidase activity	3.69E-02
111	GO:0051537: 2 iron, 2 sulfur cluster binding	3.91E-02
112	GO:0043621: protein self-association	3.91E-02
113	GO:0005509: calcium ion binding	4.37E-02
114	GO:0016298: lipase activity	4.68E-02
115	GO:0008234: cysteine-type peptidase activity	4.91E-02
116	GO:0015171: amino acid transmembrane transporter activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0005839: proteasome core complex	6.18E-24
3	GO:0000502: proteasome complex	2.20E-17
4	GO:0019773: proteasome core complex, alpha-subunit complex	4.20E-13
5	GO:0005829: cytosol	2.50E-12
6	GO:0005773: vacuole	3.09E-11
7	GO:0005774: vacuolar membrane	9.78E-10
8	GO:0005783: endoplasmic reticulum	7.59E-07
9	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.20E-05
10	GO:0000325: plant-type vacuole	2.64E-05
11	GO:0005747: mitochondrial respiratory chain complex I	1.30E-04
12	GO:0005662: DNA replication factor A complex	1.69E-04
13	GO:0019774: proteasome core complex, beta-subunit complex	1.69E-04
14	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	3.83E-04
15	GO:0048046: apoplast	4.55E-04
16	GO:0046861: glyoxysomal membrane	6.25E-04
17	GO:0045271: respiratory chain complex I	7.14E-04
18	GO:0005737: cytoplasm	8.84E-04
19	GO:0033180: proton-transporting V-type ATPase, V1 domain	8.93E-04
20	GO:0009331: glycerol-3-phosphate dehydrogenase complex	8.93E-04
21	GO:0022626: cytosolic ribosome	1.03E-03
22	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.18E-03
23	GO:0005844: polysome	1.18E-03
24	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	1.85E-03
25	GO:0000974: Prp19 complex	1.85E-03
26	GO:0032580: Golgi cisterna membrane	1.87E-03
27	GO:0010319: stromule	1.98E-03
28	GO:0005794: Golgi apparatus	2.11E-03
29	GO:0005801: cis-Golgi network	2.22E-03
30	GO:0005788: endoplasmic reticulum lumen	2.35E-03
31	GO:0009501: amyloplast	3.02E-03
32	GO:0045273: respiratory chain complex II	3.02E-03
33	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.02E-03
34	GO:0009514: glyoxysome	3.46E-03
35	GO:0005886: plasma membrane	3.88E-03
36	GO:0005763: mitochondrial small ribosomal subunit	3.91E-03
37	GO:0010494: cytoplasmic stress granule	3.91E-03
38	GO:0031090: organelle membrane	3.91E-03
39	GO:0071011: precatalytic spliceosome	4.38E-03
40	GO:0030665: clathrin-coated vesicle membrane	4.38E-03
41	GO:0017119: Golgi transport complex	4.87E-03
42	GO:0005618: cell wall	5.19E-03
43	GO:0071013: catalytic step 2 spliceosome	5.38E-03
44	GO:0031966: mitochondrial membrane	5.89E-03
45	GO:0005777: peroxisome	5.95E-03
46	GO:0009507: chloroplast	1.04E-02
47	GO:0005759: mitochondrial matrix	1.42E-02
48	GO:0005770: late endosome	1.43E-02
49	GO:0005887: integral component of plasma membrane	1.44E-02
50	GO:0009705: plant-type vacuole membrane	1.56E-02
51	GO:0000932: P-body	2.16E-02
52	GO:0005789: endoplasmic reticulum membrane	2.64E-02
53	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.65E-02
54	GO:0016020: membrane	2.71E-02
55	GO:0005819: spindle	3.28E-02
56	GO:0031902: late endosome membrane	3.49E-02
57	GO:0005802: trans-Golgi network	3.63E-02
58	GO:0005768: endosome	4.24E-02