co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0010451: floral meristem growth	0.00E+00
3	GO:0019593: mannitol biosynthetic process	0.00E+00
4	GO:0033494: ferulate metabolic process	0.00E+00
5	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
6	GO:0010378: temperature compensation of the circadian clock	0.00E+00
7	GO:0010432: bract development	0.00E+00
8	GO:0010025: wax biosynthetic process	3.27E-14
9	GO:0042335: cuticle development	6.68E-13
10	GO:0010143: cutin biosynthetic process	4.65E-10
11	GO:0006633: fatty acid biosynthetic process	1.05E-08
12	GO:0000038: very long-chain fatty acid metabolic process	2.37E-08
13	GO:0006631: fatty acid metabolic process	1.12E-05
14	GO:0009409: response to cold	1.21E-05
15	GO:0008610: lipid biosynthetic process	5.89E-05
16	GO:0006723: cuticle hydrocarbon biosynthetic process	1.02E-04
17	GO:0042759: long-chain fatty acid biosynthetic process	1.02E-04
18	GO:0080051: cutin transport	1.02E-04
19	GO:0009609: response to symbiotic bacterium	1.02E-04
20	GO:0030148: sphingolipid biosynthetic process	1.56E-04
21	GO:0010115: regulation of abscisic acid biosynthetic process	2.40E-04
22	GO:1901679: nucleotide transmembrane transport	2.40E-04
23	GO:0015908: fatty acid transport	2.40E-04
24	GO:0009416: response to light stimulus	3.22E-04
25	GO:0009809: lignin biosynthetic process	3.53E-04
26	GO:0009062: fatty acid catabolic process	3.99E-04
27	GO:0006081: cellular aldehyde metabolic process	3.99E-04
28	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.99E-04
29	GO:0043447: alkane biosynthetic process	3.99E-04
30	GO:0080121: AMP transport	3.99E-04
31	GO:0070417: cellular response to cold	5.65E-04
32	GO:1901332: negative regulation of lateral root development	5.73E-04
33	GO:0016042: lipid catabolic process	6.82E-04
34	GO:0071585: detoxification of cadmium ion	7.62E-04
35	GO:0010222: stem vascular tissue pattern formation	7.62E-04
36	GO:0046345: abscisic acid catabolic process	7.62E-04
37	GO:0022622: root system development	7.62E-04
38	GO:0006552: leucine catabolic process	7.62E-04
39	GO:0015867: ATP transport	7.62E-04
40	GO:0000302: response to reactive oxygen species	8.02E-04
41	GO:0009697: salicylic acid biosynthetic process	9.62E-04
42	GO:0006665: sphingolipid metabolic process	9.62E-04
43	GO:0048578: positive regulation of long-day photoperiodism, flowering	9.62E-04
44	GO:0006904: vesicle docking involved in exocytosis	1.02E-03
45	GO:0009414: response to water deprivation	1.08E-03
46	GO:0007623: circadian rhythm	1.09E-03
47	GO:0009737: response to abscisic acid	1.12E-03
48	GO:0009913: epidermal cell differentiation	1.17E-03
49	GO:0006574: valine catabolic process	1.17E-03
50	GO:0015866: ADP transport	1.17E-03
51	GO:0045962: positive regulation of development, heterochronic	1.17E-03
52	GO:0035435: phosphate ion transmembrane transport	1.17E-03
53	GO:0042372: phylloquinone biosynthetic process	1.40E-03
54	GO:0045926: negative regulation of growth	1.40E-03
55	GO:0009082: branched-chain amino acid biosynthetic process	1.40E-03
56	GO:0098655: cation transmembrane transport	1.40E-03
57	GO:0010555: response to mannitol	1.40E-03
58	GO:0048767: root hair elongation	1.54E-03
59	GO:1902074: response to salt	1.65E-03
60	GO:0032880: regulation of protein localization	1.65E-03
61	GO:0030497: fatty acid elongation	1.65E-03
62	GO:0050829: defense response to Gram-negative bacterium	1.65E-03
63	GO:0009637: response to blue light	1.85E-03
64	GO:0006970: response to osmotic stress	2.07E-03
65	GO:0010099: regulation of photomorphogenesis	2.17E-03
66	GO:0009827: plant-type cell wall modification	2.17E-03
67	GO:0055085: transmembrane transport	2.42E-03
68	GO:0010345: suberin biosynthetic process	2.45E-03
69	GO:0098656: anion transmembrane transport	2.45E-03
70	GO:0006098: pentose-phosphate shunt	2.45E-03
71	GO:0080167: response to karrikin	2.47E-03
72	GO:0042761: very long-chain fatty acid biosynthetic process	2.74E-03
73	GO:2000280: regulation of root development	2.74E-03
74	GO:0055114: oxidation-reduction process	2.98E-03
75	GO:0042538: hyperosmotic salinity response	2.98E-03
76	GO:0009641: shade avoidance	3.05E-03
77	GO:0006869: lipid transport	3.49E-03
78	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.69E-03
79	GO:0016024: CDP-diacylglycerol biosynthetic process	3.69E-03
80	GO:0010582: floral meristem determinacy	3.69E-03
81	GO:0009718: anthocyanin-containing compound biosynthetic process	4.02E-03
82	GO:0009725: response to hormone	4.02E-03
83	GO:0005986: sucrose biosynthetic process	4.02E-03
84	GO:0010588: cotyledon vascular tissue pattern formation	4.02E-03
85	GO:2000012: regulation of auxin polar transport	4.02E-03
86	GO:0010102: lateral root morphogenesis	4.02E-03
87	GO:0010223: secondary shoot formation	4.37E-03
88	GO:0010540: basipetal auxin transport	4.37E-03
89	GO:0042545: cell wall modification	4.39E-03
90	GO:0009873: ethylene-activated signaling pathway	5.60E-03
91	GO:0009269: response to desiccation	6.24E-03
92	GO:0001944: vasculature development	7.06E-03
93	GO:0009908: flower development	7.37E-03
94	GO:0045490: pectin catabolic process	7.80E-03
95	GO:0008284: positive regulation of cell proliferation	7.91E-03
96	GO:0042631: cellular response to water deprivation	8.35E-03
97	GO:0009611: response to wounding	8.61E-03
98	GO:0009958: positive gravitropism	8.80E-03
99	GO:0048868: pollen tube development	8.80E-03
100	GO:0010268: brassinosteroid homeostasis	8.80E-03
101	GO:0045489: pectin biosynthetic process	8.80E-03
102	GO:0042752: regulation of circadian rhythm	9.26E-03
103	GO:0008654: phospholipid biosynthetic process	9.73E-03
104	GO:0010183: pollen tube guidance	9.73E-03
105	GO:0006635: fatty acid beta-oxidation	1.02E-02
106	GO:0016132: brassinosteroid biosynthetic process	1.02E-02
107	GO:0071554: cell wall organization or biogenesis	1.02E-02
108	GO:0048235: pollen sperm cell differentiation	1.07E-02
109	GO:0010090: trichome morphogenesis	1.12E-02
110	GO:0009639: response to red or far red light	1.17E-02
111	GO:0016125: sterol metabolic process	1.17E-02
112	GO:0010252: auxin homeostasis	1.17E-02
113	GO:0009911: positive regulation of flower development	1.32E-02
114	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.38E-02
115	GO:0015995: chlorophyll biosynthetic process	1.48E-02
116	GO:0030244: cellulose biosynthetic process	1.60E-02
117	GO:0018298: protein-chromophore linkage	1.60E-02
118	GO:0010311: lateral root formation	1.65E-02
119	GO:0010218: response to far red light	1.71E-02
120	GO:0009834: plant-type secondary cell wall biogenesis	1.71E-02
121	GO:0048527: lateral root development	1.77E-02
122	GO:0009631: cold acclimation	1.77E-02
123	GO:0006839: mitochondrial transport	2.07E-02
124	GO:0006887: exocytosis	2.13E-02
125	GO:0042542: response to hydrogen peroxide	2.20E-02
126	GO:0006629: lipid metabolic process	2.22E-02
127	GO:0009926: auxin polar transport	2.26E-02
128	GO:0009744: response to sucrose	2.26E-02
129	GO:0030154: cell differentiation	2.28E-02
130	GO:0009644: response to high light intensity	2.39E-02
131	GO:0009965: leaf morphogenesis	2.46E-02
132	GO:0009585: red, far-red light phototransduction	2.80E-02
133	GO:0006857: oligopeptide transport	2.94E-02
134	GO:0009651: response to salt stress	3.02E-02
135	GO:0048367: shoot system development	3.22E-02
136	GO:0009058: biosynthetic process	4.38E-02
137	GO:0009790: embryo development	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.15E-12
3	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.15E-12
4	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.15E-12
5	GO:0070330: aromatase activity	1.87E-09
6	GO:0018685: alkane 1-monooxygenase activity	6.22E-08
7	GO:0009922: fatty acid elongase activity	6.22E-08
8	GO:0016746: transferase activity, transferring acyl groups	2.53E-06
9	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.35E-05
10	GO:0052747: sinapyl alcohol dehydrogenase activity	5.89E-05
11	GO:0008909: isochorismate synthase activity	1.02E-04
12	GO:0015245: fatty acid transporter activity	1.02E-04
13	GO:0008809: carnitine racemase activity	1.02E-04
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.02E-04
15	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.82E-04
16	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.01E-04
17	GO:0001047: core promoter binding	2.40E-04
18	GO:0017040: ceramidase activity	2.40E-04
19	GO:0016788: hydrolase activity, acting on ester bonds	2.87E-04
20	GO:0047274: galactinol-sucrose galactosyltransferase activity	3.99E-04
21	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	3.99E-04
22	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	3.99E-04
23	GO:0050734: hydroxycinnamoyltransferase activity	3.99E-04
24	GO:0052689: carboxylic ester hydrolase activity	4.58E-04
25	GO:0052656: L-isoleucine transaminase activity	5.73E-04
26	GO:0004165: dodecenoyl-CoA delta-isomerase activity	5.73E-04
27	GO:0052654: L-leucine transaminase activity	5.73E-04
28	GO:0052655: L-valine transaminase activity	5.73E-04
29	GO:0004084: branched-chain-amino-acid transaminase activity	7.62E-04
30	GO:0016791: phosphatase activity	9.62E-04
31	GO:0080122: AMP transmembrane transporter activity	9.62E-04
32	GO:0016413: O-acetyltransferase activity	1.08E-03
33	GO:0005506: iron ion binding	1.10E-03
34	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.17E-03
35	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.17E-03
36	GO:0005347: ATP transmembrane transporter activity	1.40E-03
37	GO:0015217: ADP transmembrane transporter activity	1.40E-03
38	GO:0102391: decanoate--CoA ligase activity	1.40E-03
39	GO:0004467: long-chain fatty acid-CoA ligase activity	1.65E-03
40	GO:0016621: cinnamoyl-CoA reductase activity	1.65E-03
41	GO:0009881: photoreceptor activity	1.65E-03
42	GO:0000989: transcription factor activity, transcription factor binding	2.45E-03
43	GO:0009672: auxin:proton symporter activity	2.74E-03
44	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.74E-03
45	GO:0019825: oxygen binding	2.88E-03
46	GO:0004864: protein phosphatase inhibitor activity	3.05E-03
47	GO:0045330: aspartyl esterase activity	3.53E-03
48	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.89E-03
49	GO:0015114: phosphate ion transmembrane transporter activity	4.02E-03
50	GO:0010329: auxin efflux transmembrane transporter activity	4.02E-03
51	GO:0030599: pectinesterase activity	4.26E-03
52	GO:0008083: growth factor activity	4.37E-03
53	GO:0004872: receptor activity	9.73E-03
54	GO:0020037: heme binding	9.80E-03
55	GO:0016740: transferase activity	1.08E-02
56	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.54E-02
57	GO:0003993: acid phosphatase activity	1.95E-02
58	GO:0003824: catalytic activity	2.30E-02
59	GO:0016491: oxidoreductase activity	2.89E-02
60	GO:0008234: cysteine-type peptidase activity	3.01E-02
61	GO:0008289: lipid binding	3.09E-02
62	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.37E-02
63	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.37E-02
64	GO:0015144: carbohydrate transmembrane transporter activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	6.47E-08
2	GO:0005789: endoplasmic reticulum membrane	1.82E-05
3	GO:0016021: integral component of membrane	1.55E-04
4	GO:0046658: anchored component of plasma membrane	2.15E-04
5	GO:0009505: plant-type cell wall	3.89E-04
6	GO:0009897: external side of plasma membrane	3.99E-04
7	GO:0031225: anchored component of membrane	7.18E-04
8	GO:0000145: exocyst	8.55E-04
9	GO:0016020: membrane	2.88E-03
10	GO:0005618: cell wall	3.81E-03
11	GO:0005615: extracellular space	8.73E-03
12	GO:0071944: cell periphery	1.12E-02
13	GO:0005788: endoplasmic reticulum lumen	1.38E-02
14	GO:0090406: pollen tube	2.26E-02
15	GO:0016607: nuclear speck	3.22E-02
16	GO:0005654: nucleoplasm	4.14E-02
17	GO:0005623: cell	4.30E-02