co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:1902009: positive regulation of toxin transport	0.00E+00
3	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
4	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
5	GO:0006412: translation	8.55E-10
6	GO:0006413: translational initiation	1.20E-05
7	GO:0022900: electron transport chain	1.85E-05
8	GO:0042254: ribosome biogenesis	3.43E-05
9	GO:0030490: maturation of SSU-rRNA	4.18E-05
10	GO:0009820: alkaloid metabolic process	4.18E-05
11	GO:0010365: positive regulation of ethylene biosynthetic process	4.18E-05
12	GO:0050687: negative regulation of defense response to virus	4.18E-05
13	GO:0006007: glucose catabolic process	4.18E-05
14	GO:0008535: respiratory chain complex IV assembly	1.04E-04
15	GO:0045905: positive regulation of translational termination	1.04E-04
16	GO:0045901: positive regulation of translational elongation	1.04E-04
17	GO:0015802: basic amino acid transport	1.04E-04
18	GO:0006452: translational frameshifting	1.04E-04
19	GO:0008652: cellular amino acid biosynthetic process	1.78E-04
20	GO:0009735: response to cytokinin	2.35E-04
21	GO:0000187: activation of MAPK activity	2.63E-04
22	GO:0033617: mitochondrial respiratory chain complex IV assembly	2.63E-04
23	GO:0051365: cellular response to potassium ion starvation	3.53E-04
24	GO:0005513: detection of calcium ion	4.50E-04
25	GO:0009164: nucleoside catabolic process	4.50E-04
26	GO:1900425: negative regulation of defense response to bacterium	5.51E-04
27	GO:2000037: regulation of stomatal complex patterning	6.58E-04
28	GO:0000054: ribosomal subunit export from nucleus	6.58E-04
29	GO:0006605: protein targeting	8.84E-04
30	GO:0000028: ribosomal small subunit assembly	8.84E-04
31	GO:0010204: defense response signaling pathway, resistance gene-independent	1.00E-03
32	GO:0010099: regulation of photomorphogenesis	1.00E-03
33	GO:0010497: plasmodesmata-mediated intercellular transport	1.00E-03
34	GO:0006098: pentose-phosphate shunt	1.13E-03
35	GO:2000280: regulation of root development	1.25E-03
36	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.39E-03
37	GO:0046686: response to cadmium ion	1.57E-03
38	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.67E-03
39	GO:0006820: anion transport	1.67E-03
40	GO:0006108: malate metabolic process	1.82E-03
41	GO:0010229: inflorescence development	1.82E-03
42	GO:2000012: regulation of auxin polar transport	1.82E-03
43	GO:0006807: nitrogen compound metabolic process	1.82E-03
44	GO:0009058: biosynthetic process	1.86E-03
45	GO:0002237: response to molecule of bacterial origin	1.97E-03
46	GO:0030150: protein import into mitochondrial matrix	2.46E-03
47	GO:0003333: amino acid transmembrane transport	2.80E-03
48	GO:0015992: proton transport	2.80E-03
49	GO:0009814: defense response, incompatible interaction	2.97E-03
50	GO:0031348: negative regulation of defense response	2.97E-03
51	GO:0010227: floral organ abscission	3.15E-03
52	GO:0019722: calcium-mediated signaling	3.33E-03
53	GO:0010118: stomatal movement	3.71E-03
54	GO:0006606: protein import into nucleus	3.71E-03
55	GO:0000302: response to reactive oxygen species	4.51E-03
56	GO:0009615: response to virus	5.81E-03
57	GO:0009409: response to cold	6.67E-03
58	GO:0006811: ion transport	7.47E-03
59	GO:0045087: innate immune response	8.23E-03
60	GO:0034599: cellular response to oxidative stress	8.48E-03
61	GO:0006099: tricarboxylic acid cycle	8.48E-03
62	GO:0008643: carbohydrate transport	1.04E-02
63	GO:0000165: MAPK cascade	1.12E-02
64	GO:0009809: lignin biosynthetic process	1.21E-02
65	GO:0006417: regulation of translation	1.30E-02
66	GO:0009793: embryo development ending in seed dormancy	1.32E-02
67	GO:0006096: glycolytic process	1.36E-02
68	GO:0048367: shoot system development	1.39E-02
69	GO:0009626: plant-type hypersensitive response	1.43E-02
70	GO:0000398: mRNA splicing, via spliceosome	1.72E-02
71	GO:0042744: hydrogen peroxide catabolic process	2.00E-02
72	GO:0009790: embryo development	2.03E-02
73	GO:0040008: regulation of growth	2.22E-02
74	GO:0006979: response to oxidative stress	2.47E-02
75	GO:0008380: RNA splicing	2.60E-02
76	GO:0009617: response to bacterium	2.60E-02
77	GO:0015031: protein transport	3.11E-02
78	GO:0005975: carbohydrate metabolic process	3.71E-02
79	GO:0045454: cell redox homeostasis	4.15E-02
80	GO:0006886: intracellular protein transport	4.24E-02
81	GO:0006869: lipid transport	4.43E-02
82	GO:0009408: response to heat	4.81E-02
83	GO:0006397: mRNA processing	4.96E-02
84	GO:0048364: root development	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0000340: RNA 7-methylguanosine cap binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	3.52E-12
3	GO:0003743: translation initiation factor activity	1.90E-05
4	GO:0008746: NAD(P)+ transhydrogenase activity	4.18E-05
5	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	4.18E-05
6	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	4.18E-05
7	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	1.04E-04
8	GO:0019201: nucleotide kinase activity	2.63E-04
9	GO:0003729: mRNA binding	2.68E-04
10	GO:0030145: manganese ion binding	5.49E-04
11	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	5.51E-04
12	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	5.51E-04
13	GO:0016688: L-ascorbate peroxidase activity	5.51E-04
14	GO:0016615: malate dehydrogenase activity	5.51E-04
15	GO:0004130: cytochrome-c peroxidase activity	5.51E-04
16	GO:0004017: adenylate kinase activity	6.58E-04
17	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	6.58E-04
18	GO:0030060: L-malate dehydrogenase activity	6.58E-04
19	GO:0008121: ubiquinol-cytochrome-c reductase activity	7.69E-04
20	GO:0043022: ribosome binding	8.84E-04
21	GO:0004708: MAP kinase kinase activity	8.84E-04
22	GO:0015288: porin activity	8.84E-04
23	GO:0008135: translation factor activity, RNA binding	1.00E-03
24	GO:0008308: voltage-gated anion channel activity	1.00E-03
25	GO:0001055: RNA polymerase II activity	1.25E-03
26	GO:0001054: RNA polymerase I activity	1.53E-03
27	GO:0001056: RNA polymerase III activity	1.67E-03
28	GO:0008514: organic anion transmembrane transporter activity	3.33E-03
29	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.36E-03
30	GO:0003924: GTPase activity	6.79E-03
31	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.98E-03
32	GO:0003746: translation elongation factor activity	8.23E-03
33	GO:0015293: symporter activity	1.07E-02
34	GO:0005198: structural molecule activity	1.07E-02
35	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.21E-02
36	GO:0015171: amino acid transmembrane transporter activity	1.30E-02
37	GO:0045735: nutrient reservoir activity	1.36E-02
38	GO:0005507: copper ion binding	1.72E-02
39	GO:0030170: pyridoxal phosphate binding	1.96E-02
40	GO:0005525: GTP binding	1.99E-02
41	GO:0008565: protein transporter activity	2.07E-02
42	GO:0004601: peroxidase activity	3.13E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	3.17E-02

Rank	GO Term	Adjusted P value
1	GO:0005840: ribosome	2.03E-09
2	GO:0022626: cytosolic ribosome	5.47E-08
3	GO:0022625: cytosolic large ribosomal subunit	9.06E-08
4	GO:0005737: cytoplasm	6.82E-07
5	GO:0022627: cytosolic small ribosomal subunit	9.10E-07
6	GO:0009506: plasmodesma	1.30E-06
7	GO:0005774: vacuolar membrane	4.34E-06
8	GO:0005829: cytosol	7.90E-06
9	GO:0005618: cell wall	5.85E-05
10	GO:0005741: mitochondrial outer membrane	1.19E-04
11	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.58E-04
12	GO:0005730: nucleolus	3.40E-04
13	GO:0015934: large ribosomal subunit	5.49E-04
14	GO:0000974: Prp19 complex	5.51E-04
15	GO:0046930: pore complex	1.00E-03
16	GO:0005783: endoplasmic reticulum	1.07E-03
17	GO:0005736: DNA-directed RNA polymerase I complex	1.13E-03
18	GO:0005666: DNA-directed RNA polymerase III complex	1.25E-03
19	GO:0071011: precatalytic spliceosome	1.25E-03
20	GO:0048046: apoplast	1.31E-03
21	GO:0000418: DNA-directed RNA polymerase IV complex	1.39E-03
22	GO:0005740: mitochondrial envelope	1.39E-03
23	GO:0071013: catalytic step 2 spliceosome	1.53E-03
24	GO:0005665: DNA-directed RNA polymerase II, core complex	1.67E-03
25	GO:0005623: cell	1.81E-03
26	GO:0019013: viral nucleocapsid	1.82E-03
27	GO:0005750: mitochondrial respiratory chain complex III	1.97E-03
28	GO:0005794: Golgi apparatus	2.10E-03
29	GO:0000419: DNA-directed RNA polymerase V complex	2.29E-03
30	GO:0005773: vacuole	2.55E-03
31	GO:0015935: small ribosomal subunit	2.80E-03
32	GO:0009532: plastid stroma	2.80E-03
33	GO:0016020: membrane	3.06E-03
34	GO:0031965: nuclear membrane	4.31E-03
35	GO:0010319: stromule	5.36E-03
36	GO:0009536: plastid	5.89E-03
37	GO:0005743: mitochondrial inner membrane	6.32E-03
38	GO:0005681: spliceosomal complex	1.36E-02
39	GO:0009570: chloroplast stroma	1.38E-02
40	GO:0012505: endomembrane system	1.52E-02
41	GO:0005732: small nucleolar ribonucleoprotein complex	1.65E-02
42	GO:0009507: chloroplast	1.84E-02
43	GO:0005886: plasma membrane	2.11E-02
44	GO:0005622: intracellular	2.15E-02
45	GO:0005739: mitochondrion	4.18E-02