GO Enrichment Analysis of Co-expressed Genes with
AT2G20490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006412: translation | 2.05E-86 |
| 2 | GO:0042254: ribosome biogenesis | 5.81E-34 |
| 3 | GO:0000028: ribosomal small subunit assembly | 2.07E-06 |
| 4 | GO:0080156: mitochondrial mRNA modification | 5.68E-06 |
| 5 | GO:0000387: spliceosomal snRNP assembly | 5.85E-06 |
| 6 | GO:0000027: ribosomal large subunit assembly | 3.40E-05 |
| 7 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.75E-04 |
| 8 | GO:1990258: histone glutamine methylation | 1.75E-04 |
| 9 | GO:0006407: rRNA export from nucleus | 1.75E-04 |
| 10 | GO:0015801: aromatic amino acid transport | 1.75E-04 |
| 11 | GO:0030490: maturation of SSU-rRNA | 1.75E-04 |
| 12 | GO:0000494: box C/D snoRNA 3'-end processing | 1.75E-04 |
| 13 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.75E-04 |
| 14 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 3.96E-04 |
| 15 | GO:0046939: nucleotide phosphorylation | 3.96E-04 |
| 16 | GO:0048569: post-embryonic animal organ development | 3.96E-04 |
| 17 | GO:0042256: mature ribosome assembly | 6.47E-04 |
| 18 | GO:0031167: rRNA methylation | 1.56E-03 |
| 19 | GO:0000398: mRNA splicing, via spliceosome | 1.66E-03 |
| 20 | GO:0016554: cytidine to uridine editing | 1.91E-03 |
| 21 | GO:0000741: karyogamy | 1.91E-03 |
| 22 | GO:0016070: RNA metabolic process | 1.91E-03 |
| 23 | GO:0000470: maturation of LSU-rRNA | 1.91E-03 |
| 24 | GO:0000245: spliceosomal complex assembly | 2.30E-03 |
| 25 | GO:0016444: somatic cell DNA recombination | 2.30E-03 |
| 26 | GO:0009955: adaxial/abaxial pattern specification | 2.30E-03 |
| 27 | GO:0080186: developmental vegetative growth | 2.70E-03 |
| 28 | GO:0035265: organ growth | 3.13E-03 |
| 29 | GO:0001510: RNA methylation | 3.58E-03 |
| 30 | GO:0048507: meristem development | 4.05E-03 |
| 31 | GO:0007338: single fertilization | 4.05E-03 |
| 32 | GO:0010162: seed dormancy process | 5.05E-03 |
| 33 | GO:0006364: rRNA processing | 6.66E-03 |
| 34 | GO:0006626: protein targeting to mitochondrion | 6.70E-03 |
| 35 | GO:0006446: regulation of translational initiation | 7.28E-03 |
| 36 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.15E-03 |
| 37 | GO:0003333: amino acid transmembrane transport | 1.05E-02 |
| 38 | GO:0006334: nucleosome assembly | 1.05E-02 |
| 39 | GO:0009294: DNA mediated transformation | 1.19E-02 |
| 40 | GO:0042127: regulation of cell proliferation | 1.26E-02 |
| 41 | GO:0008033: tRNA processing | 1.41E-02 |
| 42 | GO:0010197: polar nucleus fusion | 1.49E-02 |
| 43 | GO:0006635: fatty acid beta-oxidation | 1.72E-02 |
| 44 | GO:0009567: double fertilization forming a zygote and endosperm | 1.98E-02 |
| 45 | GO:0015031: protein transport | 2.18E-02 |
| 46 | GO:0010311: lateral root formation | 2.80E-02 |
| 47 | GO:0000724: double-strand break repair via homologous recombination | 3.10E-02 |
| 48 | GO:0006865: amino acid transport | 3.10E-02 |
| 49 | GO:0008283: cell proliferation | 3.84E-02 |
| 50 | GO:0009644: response to high light intensity | 4.06E-02 |
| 51 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 3.94E-99 |
| 2 | GO:0003729: mRNA binding | 4.37E-11 |
| 3 | GO:0003723: RNA binding | 5.63E-08 |
| 4 | GO:0019843: rRNA binding | 6.68E-08 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 1.75E-04 |
| 6 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 3.96E-04 |
| 7 | GO:0015173: aromatic amino acid transmembrane transporter activity | 3.96E-04 |
| 8 | GO:0008649: rRNA methyltransferase activity | 6.47E-04 |
| 9 | GO:0005275: amine transmembrane transporter activity | 1.56E-03 |
| 10 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.91E-03 |
| 11 | GO:0004017: adenylate kinase activity | 2.30E-03 |
| 12 | GO:0030515: snoRNA binding | 2.70E-03 |
| 13 | GO:0043022: ribosome binding | 3.13E-03 |
| 14 | GO:0001055: RNA polymerase II activity | 4.54E-03 |
| 15 | GO:0001054: RNA polymerase I activity | 5.58E-03 |
| 16 | GO:0044183: protein binding involved in protein folding | 5.58E-03 |
| 17 | GO:0001056: RNA polymerase III activity | 6.13E-03 |
| 18 | GO:0000175: 3'-5'-exoribonuclease activity | 6.70E-03 |
| 19 | GO:0004407: histone deacetylase activity | 9.15E-03 |
| 20 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.71E-02 |
| 21 | GO:0050897: cobalt ion binding | 3.00E-02 |
| 22 | GO:0003746: translation elongation factor activity | 3.20E-02 |
| 23 | GO:0003697: single-stranded DNA binding | 3.20E-02 |
| 24 | GO:0042393: histone binding | 3.52E-02 |
| 25 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 5.03E-64 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 5.11E-54 |
| 4 | GO:0022626: cytosolic ribosome | 2.00E-43 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 8.07E-39 |
| 6 | GO:0005730: nucleolus | 2.79E-15 |
| 7 | GO:0005829: cytosol | 9.41E-13 |
| 8 | GO:0005737: cytoplasm | 2.20E-12 |
| 9 | GO:0015934: large ribosomal subunit | 7.11E-10 |
| 10 | GO:0009506: plasmodesma | 1.82E-09 |
| 11 | GO:0015935: small ribosomal subunit | 1.73E-08 |
| 12 | GO:0034719: SMN-Sm protein complex | 5.48E-06 |
| 13 | GO:0005682: U5 snRNP | 2.35E-05 |
| 14 | GO:0005687: U4 snRNP | 3.81E-05 |
| 15 | GO:0097526: spliceosomal tri-snRNP complex | 3.81E-05 |
| 16 | GO:0005689: U12-type spliceosomal complex | 7.89E-05 |
| 17 | GO:0005774: vacuolar membrane | 1.28E-04 |
| 18 | GO:0005747: mitochondrial respiratory chain complex I | 1.42E-04 |
| 19 | GO:0005742: mitochondrial outer membrane translocase complex | 1.69E-04 |
| 20 | GO:0030686: 90S preribosome | 1.75E-04 |
| 21 | GO:0005685: U1 snRNP | 2.06E-04 |
| 22 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.16E-04 |
| 23 | GO:0071011: precatalytic spliceosome | 2.46E-04 |
| 24 | GO:0005686: U2 snRNP | 2.90E-04 |
| 25 | GO:0071013: catalytic step 2 spliceosome | 3.36E-04 |
| 26 | GO:0071010: prespliceosome | 3.96E-04 |
| 27 | GO:0019013: viral nucleocapsid | 4.39E-04 |
| 28 | GO:0034715: pICln-Sm protein complex | 6.47E-04 |
| 29 | GO:0005853: eukaryotic translation elongation factor 1 complex | 6.47E-04 |
| 30 | GO:0005681: spliceosomal complex | 1.10E-03 |
| 31 | GO:0005773: vacuole | 1.40E-03 |
| 32 | GO:0031428: box C/D snoRNP complex | 1.91E-03 |
| 33 | GO:0000243: commitment complex | 1.91E-03 |
| 34 | GO:0016272: prefoldin complex | 2.30E-03 |
| 35 | GO:0071004: U2-type prespliceosome | 3.13E-03 |
| 36 | GO:0005688: U6 snRNP | 3.13E-03 |
| 37 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.58E-03 |
| 38 | GO:0005736: DNA-directed RNA polymerase I complex | 4.05E-03 |
| 39 | GO:0016604: nuclear body | 4.54E-03 |
| 40 | GO:0005666: DNA-directed RNA polymerase III complex | 4.54E-03 |
| 41 | GO:0015030: Cajal body | 4.54E-03 |
| 42 | GO:0009507: chloroplast | 4.82E-03 |
| 43 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.05E-03 |
| 44 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.58E-03 |
| 45 | GO:0009536: plastid | 5.99E-03 |
| 46 | GO:0005665: DNA-directed RNA polymerase II, core complex | 6.13E-03 |
| 47 | GO:0032040: small-subunit processome | 6.13E-03 |
| 48 | GO:0000419: DNA-directed RNA polymerase V complex | 8.51E-03 |
| 49 | GO:0005758: mitochondrial intermembrane space | 9.15E-03 |
| 50 | GO:0005739: mitochondrion | 1.45E-02 |
| 51 | GO:0005618: cell wall | 1.65E-02 |
| 52 | GO:0016020: membrane | 1.66E-02 |
| 53 | GO:0005622: intracellular | 4.39E-02 |