GO Enrichment Analysis of Co-expressed Genes with
AT2G20230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0033388: putrescine biosynthetic process from arginine | 6.58E-05 |
| 3 | GO:1904966: positive regulation of vitamin E biosynthetic process | 6.58E-05 |
| 4 | GO:1904964: positive regulation of phytol biosynthetic process | 6.58E-05 |
| 5 | GO:0042371: vitamin K biosynthetic process | 6.58E-05 |
| 6 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.59E-04 |
| 7 | GO:0006435: threonyl-tRNA aminoacylation | 1.59E-04 |
| 8 | GO:0080005: photosystem stoichiometry adjustment | 1.59E-04 |
| 9 | GO:0000256: allantoin catabolic process | 1.59E-04 |
| 10 | GO:0009446: putrescine biosynthetic process | 1.59E-04 |
| 11 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.59E-04 |
| 12 | GO:0010136: ureide catabolic process | 2.69E-04 |
| 13 | GO:0051604: protein maturation | 2.69E-04 |
| 14 | GO:0006145: purine nucleobase catabolic process | 3.90E-04 |
| 15 | GO:0051016: barbed-end actin filament capping | 3.90E-04 |
| 16 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.90E-04 |
| 17 | GO:2001141: regulation of RNA biosynthetic process | 3.90E-04 |
| 18 | GO:0009765: photosynthesis, light harvesting | 5.20E-04 |
| 19 | GO:0006021: inositol biosynthetic process | 5.20E-04 |
| 20 | GO:0042274: ribosomal small subunit biogenesis | 5.20E-04 |
| 21 | GO:0016120: carotene biosynthetic process | 6.60E-04 |
| 22 | GO:0016123: xanthophyll biosynthetic process | 6.60E-04 |
| 23 | GO:0006810: transport | 7.77E-04 |
| 24 | GO:0046855: inositol phosphate dephosphorylation | 8.06E-04 |
| 25 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.06E-04 |
| 26 | GO:0010189: vitamin E biosynthetic process | 9.59E-04 |
| 27 | GO:0007568: aging | 9.63E-04 |
| 28 | GO:0006457: protein folding | 1.01E-03 |
| 29 | GO:0009772: photosynthetic electron transport in photosystem II | 1.12E-03 |
| 30 | GO:1900056: negative regulation of leaf senescence | 1.12E-03 |
| 31 | GO:0030091: protein repair | 1.29E-03 |
| 32 | GO:0071482: cellular response to light stimulus | 1.47E-03 |
| 33 | GO:0009793: embryo development ending in seed dormancy | 1.71E-03 |
| 34 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.85E-03 |
| 35 | GO:0009773: photosynthetic electron transport in photosystem I | 2.26E-03 |
| 36 | GO:0006352: DNA-templated transcription, initiation | 2.26E-03 |
| 37 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.26E-03 |
| 38 | GO:0006790: sulfur compound metabolic process | 2.48E-03 |
| 39 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.48E-03 |
| 40 | GO:0006807: nitrogen compound metabolic process | 2.70E-03 |
| 41 | GO:0009767: photosynthetic electron transport chain | 2.70E-03 |
| 42 | GO:0019853: L-ascorbic acid biosynthetic process | 3.16E-03 |
| 43 | GO:0046854: phosphatidylinositol phosphorylation | 3.16E-03 |
| 44 | GO:0006863: purine nucleobase transport | 3.40E-03 |
| 45 | GO:0006833: water transport | 3.40E-03 |
| 46 | GO:0007017: microtubule-based process | 3.90E-03 |
| 47 | GO:0016117: carotenoid biosynthetic process | 5.26E-03 |
| 48 | GO:0034220: ion transmembrane transport | 5.55E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 5.55E-03 |
| 50 | GO:0048868: pollen tube development | 5.85E-03 |
| 51 | GO:0015986: ATP synthesis coupled proton transport | 6.15E-03 |
| 52 | GO:0008654: phospholipid biosynthetic process | 6.45E-03 |
| 53 | GO:0009658: chloroplast organization | 6.69E-03 |
| 54 | GO:0010193: response to ozone | 6.76E-03 |
| 55 | GO:0016032: viral process | 7.08E-03 |
| 56 | GO:0006464: cellular protein modification process | 7.73E-03 |
| 57 | GO:0080167: response to karrikin | 8.30E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 8.74E-03 |
| 59 | GO:0015979: photosynthesis | 9.48E-03 |
| 60 | GO:0018298: protein-chromophore linkage | 1.05E-02 |
| 61 | GO:0006508: proteolysis | 1.09E-02 |
| 62 | GO:0009910: negative regulation of flower development | 1.17E-02 |
| 63 | GO:0032259: methylation | 1.18E-02 |
| 64 | GO:0009853: photorespiration | 1.24E-02 |
| 65 | GO:0009637: response to blue light | 1.24E-02 |
| 66 | GO:0009409: response to cold | 1.42E-02 |
| 67 | GO:0010114: response to red light | 1.49E-02 |
| 68 | GO:0042538: hyperosmotic salinity response | 1.75E-02 |
| 69 | GO:0006364: rRNA processing | 1.84E-02 |
| 70 | GO:0010224: response to UV-B | 1.88E-02 |
| 71 | GO:0009553: embryo sac development | 2.31E-02 |
| 72 | GO:0055085: transmembrane transport | 2.77E-02 |
| 73 | GO:0009845: seed germination | 2.93E-02 |
| 74 | GO:0009790: embryo development | 3.09E-02 |
| 75 | GO:0009451: RNA modification | 3.54E-02 |
| 76 | GO:0007166: cell surface receptor signaling pathway | 3.83E-02 |
| 77 | GO:0010468: regulation of gene expression | 3.95E-02 |
| 78 | GO:0042254: ribosome biogenesis | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 2 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 3 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 6.58E-05 |
| 6 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 6.58E-05 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.30E-04 |
| 8 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.59E-04 |
| 9 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.59E-04 |
| 10 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.59E-04 |
| 11 | GO:0004829: threonine-tRNA ligase activity | 1.59E-04 |
| 12 | GO:0004848: ureidoglycolate hydrolase activity | 2.69E-04 |
| 13 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.69E-04 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 2.69E-04 |
| 15 | GO:0016987: sigma factor activity | 5.20E-04 |
| 16 | GO:0043495: protein anchor | 5.20E-04 |
| 17 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.20E-04 |
| 18 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 5.20E-04 |
| 19 | GO:0001053: plastid sigma factor activity | 5.20E-04 |
| 20 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.06E-04 |
| 21 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.59E-04 |
| 22 | GO:0019899: enzyme binding | 1.12E-03 |
| 23 | GO:0008233: peptidase activity | 1.15E-03 |
| 24 | GO:0016491: oxidoreductase activity | 3.02E-03 |
| 25 | GO:0005528: FK506 binding | 3.65E-03 |
| 26 | GO:0043424: protein histidine kinase binding | 3.90E-03 |
| 27 | GO:0005345: purine nucleobase transmembrane transporter activity | 3.90E-03 |
| 28 | GO:0004176: ATP-dependent peptidase activity | 4.17E-03 |
| 29 | GO:0022891: substrate-specific transmembrane transporter activity | 4.70E-03 |
| 30 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.85E-03 |
| 31 | GO:0008168: methyltransferase activity | 6.45E-03 |
| 32 | GO:0048038: quinone binding | 6.76E-03 |
| 33 | GO:0008483: transaminase activity | 8.06E-03 |
| 34 | GO:0008237: metallopeptidase activity | 8.06E-03 |
| 35 | GO:0015250: water channel activity | 8.74E-03 |
| 36 | GO:0016168: chlorophyll binding | 9.08E-03 |
| 37 | GO:0008236: serine-type peptidase activity | 1.02E-02 |
| 38 | GO:0050897: cobalt ion binding | 1.17E-02 |
| 39 | GO:0004364: glutathione transferase activity | 1.45E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.84E-02 |
| 41 | GO:0003777: microtubule motor activity | 1.98E-02 |
| 42 | GO:0031625: ubiquitin protein ligase binding | 1.98E-02 |
| 43 | GO:0003779: actin binding | 2.31E-02 |
| 44 | GO:0016746: transferase activity, transferring acyl groups | 2.41E-02 |
| 45 | GO:0019843: rRNA binding | 2.77E-02 |
| 46 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.82E-02 |
| 47 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.32E-02 |
| 48 | GO:0042802: identical protein binding | 4.13E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.16E-16 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.28E-08 |
| 3 | GO:0009534: chloroplast thylakoid | 1.45E-04 |
| 4 | GO:0031969: chloroplast membrane | 1.47E-04 |
| 5 | GO:0008290: F-actin capping protein complex | 1.59E-04 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 3.48E-04 |
| 7 | GO:0009526: plastid envelope | 5.20E-04 |
| 8 | GO:0030286: dynein complex | 5.20E-04 |
| 9 | GO:0055035: plastid thylakoid membrane | 6.60E-04 |
| 10 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 8.06E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 1.12E-03 |
| 12 | GO:0031977: thylakoid lumen | 1.24E-03 |
| 13 | GO:0009941: chloroplast envelope | 1.62E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.65E-03 |
| 15 | GO:0005747: mitochondrial respiratory chain complex I | 2.18E-03 |
| 16 | GO:0009508: plastid chromosome | 2.70E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 2.93E-03 |
| 18 | GO:0005875: microtubule associated complex | 3.40E-03 |
| 19 | GO:0042651: thylakoid membrane | 3.90E-03 |
| 20 | GO:0045271: respiratory chain complex I | 3.90E-03 |
| 21 | GO:0009523: photosystem II | 6.45E-03 |
| 22 | GO:0009295: nucleoid | 8.06E-03 |
| 23 | GO:0010319: stromule | 8.06E-03 |
| 24 | GO:0031966: mitochondrial membrane | 1.75E-02 |
| 25 | GO:0009579: thylakoid | 2.61E-02 |
| 26 | GO:0010287: plastoglobule | 2.67E-02 |
| 27 | GO:0005759: mitochondrial matrix | 3.26E-02 |