Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G20230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0033388: putrescine biosynthetic process from arginine6.58E-05
3GO:1904966: positive regulation of vitamin E biosynthetic process6.58E-05
4GO:1904964: positive regulation of phytol biosynthetic process6.58E-05
5GO:0042371: vitamin K biosynthetic process6.58E-05
6GO:1902326: positive regulation of chlorophyll biosynthetic process1.59E-04
7GO:0006435: threonyl-tRNA aminoacylation1.59E-04
8GO:0080005: photosystem stoichiometry adjustment1.59E-04
9GO:0000256: allantoin catabolic process1.59E-04
10GO:0009446: putrescine biosynthetic process1.59E-04
11GO:0010275: NAD(P)H dehydrogenase complex assembly1.59E-04
12GO:0010136: ureide catabolic process2.69E-04
13GO:0051604: protein maturation2.69E-04
14GO:0006145: purine nucleobase catabolic process3.90E-04
15GO:0051016: barbed-end actin filament capping3.90E-04
16GO:0009052: pentose-phosphate shunt, non-oxidative branch3.90E-04
17GO:2001141: regulation of RNA biosynthetic process3.90E-04
18GO:0009765: photosynthesis, light harvesting5.20E-04
19GO:0006021: inositol biosynthetic process5.20E-04
20GO:0042274: ribosomal small subunit biogenesis5.20E-04
21GO:0016120: carotene biosynthetic process6.60E-04
22GO:0016123: xanthophyll biosynthetic process6.60E-04
23GO:0006810: transport7.77E-04
24GO:0046855: inositol phosphate dephosphorylation8.06E-04
25GO:0006655: phosphatidylglycerol biosynthetic process8.06E-04
26GO:0010189: vitamin E biosynthetic process9.59E-04
27GO:0007568: aging9.63E-04
28GO:0006457: protein folding1.01E-03
29GO:0009772: photosynthetic electron transport in photosystem II1.12E-03
30GO:1900056: negative regulation of leaf senescence1.12E-03
31GO:0030091: protein repair1.29E-03
32GO:0071482: cellular response to light stimulus1.47E-03
33GO:0009793: embryo development ending in seed dormancy1.71E-03
34GO:0010380: regulation of chlorophyll biosynthetic process1.85E-03
35GO:0009773: photosynthetic electron transport in photosystem I2.26E-03
36GO:0006352: DNA-templated transcription, initiation2.26E-03
37GO:0018119: peptidyl-cysteine S-nitrosylation2.26E-03
38GO:0006790: sulfur compound metabolic process2.48E-03
39GO:0016024: CDP-diacylglycerol biosynthetic process2.48E-03
40GO:0006807: nitrogen compound metabolic process2.70E-03
41GO:0009767: photosynthetic electron transport chain2.70E-03
42GO:0019853: L-ascorbic acid biosynthetic process3.16E-03
43GO:0046854: phosphatidylinositol phosphorylation3.16E-03
44GO:0006863: purine nucleobase transport3.40E-03
45GO:0006833: water transport3.40E-03
46GO:0007017: microtubule-based process3.90E-03
47GO:0016117: carotenoid biosynthetic process5.26E-03
48GO:0034220: ion transmembrane transport5.55E-03
49GO:0000413: protein peptidyl-prolyl isomerization5.55E-03
50GO:0048868: pollen tube development5.85E-03
51GO:0015986: ATP synthesis coupled proton transport6.15E-03
52GO:0008654: phospholipid biosynthetic process6.45E-03
53GO:0009658: chloroplast organization6.69E-03
54GO:0010193: response to ozone6.76E-03
55GO:0016032: viral process7.08E-03
56GO:0006464: cellular protein modification process7.73E-03
57GO:0080167: response to karrikin8.30E-03
58GO:0010027: thylakoid membrane organization8.74E-03
59GO:0015979: photosynthesis9.48E-03
60GO:0018298: protein-chromophore linkage1.05E-02
61GO:0006508: proteolysis1.09E-02
62GO:0009910: negative regulation of flower development1.17E-02
63GO:0032259: methylation1.18E-02
64GO:0009853: photorespiration1.24E-02
65GO:0009637: response to blue light1.24E-02
66GO:0009409: response to cold1.42E-02
67GO:0010114: response to red light1.49E-02
68GO:0042538: hyperosmotic salinity response1.75E-02
69GO:0006364: rRNA processing1.84E-02
70GO:0010224: response to UV-B1.88E-02
71GO:0009553: embryo sac development2.31E-02
72GO:0055085: transmembrane transport2.77E-02
73GO:0009845: seed germination2.93E-02
74GO:0009790: embryo development3.09E-02
75GO:0009451: RNA modification3.54E-02
76GO:0007166: cell surface receptor signaling pathway3.83E-02
77GO:0010468: regulation of gene expression3.95E-02
78GO:0042254: ribosome biogenesis4.82E-02
RankGO TermAdjusted P value
1GO:0045435: lycopene epsilon cyclase activity0.00E+00
2GO:0010276: phytol kinase activity0.00E+00
3GO:0050126: N-carbamoylputrescine amidase activity0.00E+00
4GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
5GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity6.58E-05
6GO:0010347: L-galactose-1-phosphate phosphatase activity6.58E-05
7GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.30E-04
8GO:0052832: inositol monophosphate 3-phosphatase activity1.59E-04
9GO:0008934: inositol monophosphate 1-phosphatase activity1.59E-04
10GO:0052833: inositol monophosphate 4-phosphatase activity1.59E-04
11GO:0004829: threonine-tRNA ligase activity1.59E-04
12GO:0004848: ureidoglycolate hydrolase activity2.69E-04
13GO:0004148: dihydrolipoyl dehydrogenase activity2.69E-04
14GO:0004751: ribose-5-phosphate isomerase activity2.69E-04
15GO:0016987: sigma factor activity5.20E-04
16GO:0043495: protein anchor5.20E-04
17GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds5.20E-04
18GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity5.20E-04
19GO:0001053: plastid sigma factor activity5.20E-04
20GO:0004605: phosphatidate cytidylyltransferase activity8.06E-04
21GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity9.59E-04
22GO:0019899: enzyme binding1.12E-03
23GO:0008233: peptidase activity1.15E-03
24GO:0016491: oxidoreductase activity3.02E-03
25GO:0005528: FK506 binding3.65E-03
26GO:0043424: protein histidine kinase binding3.90E-03
27GO:0005345: purine nucleobase transmembrane transporter activity3.90E-03
28GO:0004176: ATP-dependent peptidase activity4.17E-03
29GO:0022891: substrate-specific transmembrane transporter activity4.70E-03
30GO:0046933: proton-transporting ATP synthase activity, rotational mechanism5.85E-03
31GO:0008168: methyltransferase activity6.45E-03
32GO:0048038: quinone binding6.76E-03
33GO:0008483: transaminase activity8.06E-03
34GO:0008237: metallopeptidase activity8.06E-03
35GO:0015250: water channel activity8.74E-03
36GO:0016168: chlorophyll binding9.08E-03
37GO:0008236: serine-type peptidase activity1.02E-02
38GO:0050897: cobalt ion binding1.17E-02
39GO:0004364: glutathione transferase activity1.45E-02
40GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.84E-02
41GO:0003777: microtubule motor activity1.98E-02
42GO:0031625: ubiquitin protein ligase binding1.98E-02
43GO:0003779: actin binding2.31E-02
44GO:0016746: transferase activity, transferring acyl groups2.41E-02
45GO:0019843: rRNA binding2.77E-02
46GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.82E-02
47GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.32E-02
48GO:0042802: identical protein binding4.13E-02
49GO:0016788: hydrolase activity, acting on ester bonds4.82E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.16E-16
2GO:0009535: chloroplast thylakoid membrane6.28E-08
3GO:0009534: chloroplast thylakoid1.45E-04
4GO:0031969: chloroplast membrane1.47E-04
5GO:0008290: F-actin capping protein complex1.59E-04
6GO:0009543: chloroplast thylakoid lumen3.48E-04
7GO:0009526: plastid envelope5.20E-04
8GO:0030286: dynein complex5.20E-04
9GO:0055035: plastid thylakoid membrane6.60E-04
10GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)8.06E-04
11GO:0009533: chloroplast stromal thylakoid1.12E-03
12GO:0031977: thylakoid lumen1.24E-03
13GO:0009941: chloroplast envelope1.62E-03
14GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.65E-03
15GO:0005747: mitochondrial respiratory chain complex I2.18E-03
16GO:0009508: plastid chromosome2.70E-03
17GO:0030095: chloroplast photosystem II2.93E-03
18GO:0005875: microtubule associated complex3.40E-03
19GO:0042651: thylakoid membrane3.90E-03
20GO:0045271: respiratory chain complex I3.90E-03
21GO:0009523: photosystem II6.45E-03
22GO:0009295: nucleoid8.06E-03
23GO:0010319: stromule8.06E-03
24GO:0031966: mitochondrial membrane1.75E-02
25GO:0009579: thylakoid2.61E-02
26GO:0010287: plastoglobule2.67E-02
27GO:0005759: mitochondrial matrix3.26E-02
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Gene type



Gene DE type