GO Enrichment Analysis of Co-expressed Genes with
AT2G20060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:0006412: translation | 9.52E-74 |
| 5 | GO:0042254: ribosome biogenesis | 1.09E-23 |
| 6 | GO:0000027: ribosomal large subunit assembly | 2.59E-10 |
| 7 | GO:0006626: protein targeting to mitochondrion | 2.58E-05 |
| 8 | GO:0006458: 'de novo' protein folding | 1.10E-04 |
| 9 | GO:0008033: tRNA processing | 1.37E-04 |
| 10 | GO:0010197: polar nucleus fusion | 1.52E-04 |
| 11 | GO:0006364: rRNA processing | 1.67E-04 |
| 12 | GO:0000028: ribosomal small subunit assembly | 1.85E-04 |
| 13 | GO:0080156: mitochondrial mRNA modification | 2.06E-04 |
| 14 | GO:0006407: rRNA export from nucleus | 2.16E-04 |
| 15 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 2.16E-04 |
| 16 | GO:0031120: snRNA pseudouridine synthesis | 2.16E-04 |
| 17 | GO:0031118: rRNA pseudouridine synthesis | 2.16E-04 |
| 18 | GO:0015801: aromatic amino acid transport | 2.16E-04 |
| 19 | GO:0048453: sepal formation | 2.16E-04 |
| 20 | GO:0031060: regulation of histone methylation | 2.16E-04 |
| 21 | GO:0006434: seryl-tRNA aminoacylation | 2.16E-04 |
| 22 | GO:0000494: box C/D snoRNA 3'-end processing | 2.16E-04 |
| 23 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.16E-04 |
| 24 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.16E-04 |
| 25 | GO:1990258: histone glutamine methylation | 2.16E-04 |
| 26 | GO:0000387: spliceosomal snRNP assembly | 3.31E-04 |
| 27 | GO:0000398: mRNA splicing, via spliceosome | 3.80E-04 |
| 28 | GO:0045859: regulation of protein kinase activity | 4.81E-04 |
| 29 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 4.81E-04 |
| 30 | GO:0045041: protein import into mitochondrial intermembrane space | 4.81E-04 |
| 31 | GO:0048569: post-embryonic animal organ development | 4.81E-04 |
| 32 | GO:0010198: synergid death | 4.81E-04 |
| 33 | GO:0009967: positive regulation of signal transduction | 4.81E-04 |
| 34 | GO:0006435: threonyl-tRNA aminoacylation | 4.81E-04 |
| 35 | GO:1902626: assembly of large subunit precursor of preribosome | 7.83E-04 |
| 36 | GO:0002181: cytoplasmic translation | 7.83E-04 |
| 37 | GO:0010476: gibberellin mediated signaling pathway | 7.83E-04 |
| 38 | GO:0042256: mature ribosome assembly | 7.83E-04 |
| 39 | GO:0010338: leaf formation | 7.83E-04 |
| 40 | GO:0061077: chaperone-mediated protein folding | 1.09E-03 |
| 41 | GO:0009558: embryo sac cellularization | 1.12E-03 |
| 42 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.12E-03 |
| 43 | GO:0007004: telomere maintenance via telomerase | 1.12E-03 |
| 44 | GO:0070301: cellular response to hydrogen peroxide | 1.12E-03 |
| 45 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.12E-03 |
| 46 | GO:0006241: CTP biosynthetic process | 1.12E-03 |
| 47 | GO:0006165: nucleoside diphosphate phosphorylation | 1.12E-03 |
| 48 | GO:0006228: UTP biosynthetic process | 1.12E-03 |
| 49 | GO:0006164: purine nucleotide biosynthetic process | 1.12E-03 |
| 50 | GO:0007005: mitochondrion organization | 1.18E-03 |
| 51 | GO:0006183: GTP biosynthetic process | 1.48E-03 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 1.63E-03 |
| 53 | GO:0009735: response to cytokinin | 1.74E-03 |
| 54 | GO:0031167: rRNA methylation | 1.89E-03 |
| 55 | GO:0000470: maturation of LSU-rRNA | 2.33E-03 |
| 56 | GO:0010358: leaf shaping | 2.33E-03 |
| 57 | GO:0016554: cytidine to uridine editing | 2.33E-03 |
| 58 | GO:0000741: karyogamy | 2.33E-03 |
| 59 | GO:0016444: somatic cell DNA recombination | 2.80E-03 |
| 60 | GO:0009955: adaxial/abaxial pattern specification | 2.80E-03 |
| 61 | GO:0042026: protein refolding | 2.80E-03 |
| 62 | GO:0001522: pseudouridine synthesis | 3.82E-03 |
| 63 | GO:0050821: protein stabilization | 3.82E-03 |
| 64 | GO:0001558: regulation of cell growth | 4.38E-03 |
| 65 | GO:0043562: cellular response to nitrogen levels | 4.38E-03 |
| 66 | GO:0001510: RNA methylation | 4.38E-03 |
| 67 | GO:0006189: 'de novo' IMP biosynthetic process | 4.95E-03 |
| 68 | GO:0007338: single fertilization | 4.95E-03 |
| 69 | GO:0048507: meristem development | 4.95E-03 |
| 70 | GO:0010162: seed dormancy process | 6.18E-03 |
| 71 | GO:0008283: cell proliferation | 6.63E-03 |
| 72 | GO:0006820: anion transport | 7.51E-03 |
| 73 | GO:0010102: lateral root morphogenesis | 8.22E-03 |
| 74 | GO:0006446: regulation of translational initiation | 8.94E-03 |
| 75 | GO:0048467: gynoecium development | 8.94E-03 |
| 76 | GO:0048440: carpel development | 8.94E-03 |
| 77 | GO:0009933: meristem structural organization | 8.94E-03 |
| 78 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.12E-02 |
| 79 | GO:0030150: protein import into mitochondrial matrix | 1.12E-02 |
| 80 | GO:0051302: regulation of cell division | 1.21E-02 |
| 81 | GO:0006457: protein folding | 1.21E-02 |
| 82 | GO:0009553: embryo sac development | 1.24E-02 |
| 83 | GO:0003333: amino acid transmembrane transport | 1.29E-02 |
| 84 | GO:0006334: nucleosome assembly | 1.29E-02 |
| 85 | GO:0010082: regulation of root meristem growth | 1.46E-02 |
| 86 | GO:0009294: DNA mediated transformation | 1.46E-02 |
| 87 | GO:0071215: cellular response to abscisic acid stimulus | 1.46E-02 |
| 88 | GO:0046686: response to cadmium ion | 1.51E-02 |
| 89 | GO:0048443: stamen development | 1.55E-02 |
| 90 | GO:0010305: leaf vascular tissue pattern formation | 1.83E-02 |
| 91 | GO:0009749: response to glucose | 2.02E-02 |
| 92 | GO:0006635: fatty acid beta-oxidation | 2.12E-02 |
| 93 | GO:0009567: double fertilization forming a zygote and endosperm | 2.44E-02 |
| 94 | GO:0042128: nitrate assimilation | 2.99E-02 |
| 95 | GO:0015031: protein transport | 3.36E-02 |
| 96 | GO:0010311: lateral root formation | 3.46E-02 |
| 97 | GO:0006811: ion transport | 3.58E-02 |
| 98 | GO:0000724: double-strand break repair via homologous recombination | 3.82E-02 |
| 99 | GO:0006865: amino acid transport | 3.82E-02 |
| 100 | GO:0009744: response to sucrose | 4.73E-02 |
| 101 | GO:0009644: response to high light intensity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 1.45E-87 |
| 4 | GO:0003729: mRNA binding | 8.96E-16 |
| 5 | GO:0019843: rRNA binding | 2.95E-10 |
| 6 | GO:0003723: RNA binding | 1.31E-08 |
| 7 | GO:0044183: protein binding involved in protein folding | 1.64E-05 |
| 8 | GO:0030515: snoRNA binding | 1.45E-04 |
| 9 | GO:0015288: porin activity | 1.85E-04 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 2.16E-04 |
| 11 | GO:0035614: snRNA stem-loop binding | 2.16E-04 |
| 12 | GO:0004828: serine-tRNA ligase activity | 2.16E-04 |
| 13 | GO:0004679: AMP-activated protein kinase activity | 2.16E-04 |
| 14 | GO:0051082: unfolded protein binding | 3.02E-04 |
| 15 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.80E-04 |
| 16 | GO:0004829: threonine-tRNA ligase activity | 4.81E-04 |
| 17 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 4.81E-04 |
| 18 | GO:0030619: U1 snRNA binding | 4.81E-04 |
| 19 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.81E-04 |
| 20 | GO:0070034: telomerase RNA binding | 4.81E-04 |
| 21 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 4.81E-04 |
| 22 | GO:0005078: MAP-kinase scaffold activity | 4.81E-04 |
| 23 | GO:0008649: rRNA methyltransferase activity | 7.83E-04 |
| 24 | GO:0032947: protein complex scaffold | 7.83E-04 |
| 25 | GO:0004550: nucleoside diphosphate kinase activity | 1.12E-03 |
| 26 | GO:0008097: 5S rRNA binding | 1.12E-03 |
| 27 | GO:0005275: amine transmembrane transporter activity | 1.89E-03 |
| 28 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.33E-03 |
| 29 | GO:0019887: protein kinase regulator activity | 2.80E-03 |
| 30 | GO:0008235: metalloexopeptidase activity | 3.30E-03 |
| 31 | GO:0043022: ribosome binding | 3.82E-03 |
| 32 | GO:0008308: voltage-gated anion channel activity | 4.38E-03 |
| 33 | GO:0001055: RNA polymerase II activity | 5.56E-03 |
| 34 | GO:0042393: histone binding | 5.86E-03 |
| 35 | GO:0001054: RNA polymerase I activity | 6.84E-03 |
| 36 | GO:0001056: RNA polymerase III activity | 7.51E-03 |
| 37 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.74E-03 |
| 38 | GO:0031072: heat shock protein binding | 8.22E-03 |
| 39 | GO:0015266: protein channel activity | 8.22E-03 |
| 40 | GO:0004407: histone deacetylase activity | 1.12E-02 |
| 41 | GO:0005216: ion channel activity | 1.21E-02 |
| 42 | GO:0004176: ATP-dependent peptidase activity | 1.29E-02 |
| 43 | GO:0004812: aminoacyl-tRNA ligase activity | 1.64E-02 |
| 44 | GO:0010181: FMN binding | 1.93E-02 |
| 45 | GO:0008237: metallopeptidase activity | 2.54E-02 |
| 46 | GO:0008236: serine-type peptidase activity | 3.22E-02 |
| 47 | GO:0003682: chromatin binding | 3.62E-02 |
| 48 | GO:0050897: cobalt ion binding | 3.70E-02 |
| 49 | GO:0003746: translation elongation factor activity | 3.95E-02 |
| 50 | GO:0003697: single-stranded DNA binding | 3.95E-02 |
| 51 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 5.41E-57 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.33E-53 |
| 7 | GO:0022626: cytosolic ribosome | 6.32E-43 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 1.67E-31 |
| 9 | GO:0005829: cytosol | 3.86E-21 |
| 10 | GO:0005730: nucleolus | 4.32E-20 |
| 11 | GO:0005737: cytoplasm | 4.16E-15 |
| 12 | GO:0005774: vacuolar membrane | 1.85E-11 |
| 13 | GO:0015935: small ribosomal subunit | 5.19E-10 |
| 14 | GO:0009506: plasmodesma | 4.45E-09 |
| 15 | GO:0015934: large ribosomal subunit | 8.03E-08 |
| 16 | GO:0015030: Cajal body | 9.61E-06 |
| 17 | GO:0019013: viral nucleocapsid | 2.58E-05 |
| 18 | GO:0016020: membrane | 6.61E-05 |
| 19 | GO:0030686: 90S preribosome | 2.16E-04 |
| 20 | GO:0005681: spliceosomal complex | 2.22E-04 |
| 21 | GO:0046930: pore complex | 2.29E-04 |
| 22 | GO:0005742: mitochondrial outer membrane translocase complex | 2.29E-04 |
| 23 | GO:0005747: mitochondrial respiratory chain complex I | 2.34E-04 |
| 24 | GO:0005685: U1 snRNP | 2.78E-04 |
| 25 | GO:0005739: mitochondrion | 2.99E-04 |
| 26 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.47E-04 |
| 27 | GO:0005773: vacuole | 3.97E-04 |
| 28 | GO:0034719: SMN-Sm protein complex | 7.83E-04 |
| 29 | GO:0005853: eukaryotic translation elongation factor 1 complex | 7.83E-04 |
| 30 | GO:0005758: mitochondrial intermembrane space | 9.02E-04 |
| 31 | GO:0031429: box H/ACA snoRNP complex | 1.12E-03 |
| 32 | GO:0009507: chloroplast | 1.16E-03 |
| 33 | GO:0005618: cell wall | 1.43E-03 |
| 34 | GO:0005682: U5 snRNP | 1.48E-03 |
| 35 | GO:0005687: U4 snRNP | 1.89E-03 |
| 36 | GO:0097526: spliceosomal tri-snRNP complex | 1.89E-03 |
| 37 | GO:0031428: box C/D snoRNP complex | 2.33E-03 |
| 38 | GO:0005689: U12-type spliceosomal complex | 2.80E-03 |
| 39 | GO:0016272: prefoldin complex | 2.80E-03 |
| 40 | GO:0030529: intracellular ribonucleoprotein complex | 3.12E-03 |
| 41 | GO:0031359: integral component of chloroplast outer membrane | 3.30E-03 |
| 42 | GO:0071004: U2-type prespliceosome | 3.82E-03 |
| 43 | GO:0005763: mitochondrial small ribosomal subunit | 4.95E-03 |
| 44 | GO:0005736: DNA-directed RNA polymerase I complex | 4.95E-03 |
| 45 | GO:0005666: DNA-directed RNA polymerase III complex | 5.56E-03 |
| 46 | GO:0071011: precatalytic spliceosome | 5.56E-03 |
| 47 | GO:0005686: U2 snRNP | 6.18E-03 |
| 48 | GO:0000418: DNA-directed RNA polymerase IV complex | 6.18E-03 |
| 49 | GO:0071013: catalytic step 2 spliceosome | 6.84E-03 |
| 50 | GO:0048471: perinuclear region of cytoplasm | 6.84E-03 |
| 51 | GO:0005852: eukaryotic translation initiation factor 3 complex | 6.84E-03 |
| 52 | GO:0032040: small-subunit processome | 7.51E-03 |
| 53 | GO:0005665: DNA-directed RNA polymerase II, core complex | 7.51E-03 |
| 54 | GO:0009536: plastid | 1.00E-02 |
| 55 | GO:0000419: DNA-directed RNA polymerase V complex | 1.05E-02 |
| 56 | GO:0009706: chloroplast inner membrane | 1.28E-02 |
| 57 | GO:0005741: mitochondrial outer membrane | 1.29E-02 |
| 58 | GO:0005743: mitochondrial inner membrane | 1.38E-02 |
| 59 | GO:0005622: intracellular | 1.94E-02 |
| 60 | GO:0005886: plasma membrane | 2.37E-02 |