GO Enrichment Analysis of Co-expressed Genes with
AT2G19870
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 3 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 4 | GO:0031591: wybutosine biosynthetic process | 0.00E+00 |
| 5 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 6 | GO:0006364: rRNA processing | 1.37E-06 |
| 7 | GO:0009451: RNA modification | 1.00E-05 |
| 8 | GO:0006177: GMP biosynthetic process | 3.64E-05 |
| 9 | GO:0043985: histone H4-R3 methylation | 3.64E-05 |
| 10 | GO:0031120: snRNA pseudouridine synthesis | 3.64E-05 |
| 11 | GO:0031118: rRNA pseudouridine synthesis | 3.64E-05 |
| 12 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.09E-05 |
| 13 | GO:0045041: protein import into mitochondrial intermembrane space | 9.09E-05 |
| 14 | GO:0007005: mitochondrion organization | 1.08E-04 |
| 15 | GO:0010501: RNA secondary structure unwinding | 1.55E-04 |
| 16 | GO:0007276: gamete generation | 2.33E-04 |
| 17 | GO:0051131: chaperone-mediated protein complex assembly | 2.33E-04 |
| 18 | GO:1900864: mitochondrial RNA modification | 3.14E-04 |
| 19 | GO:0046345: abscisic acid catabolic process | 3.14E-04 |
| 20 | GO:0016554: cytidine to uridine editing | 4.92E-04 |
| 21 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 4.92E-04 |
| 22 | GO:0042026: protein refolding | 5.88E-04 |
| 23 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.88E-04 |
| 24 | GO:0006458: 'de novo' protein folding | 5.88E-04 |
| 25 | GO:0006400: tRNA modification | 6.87E-04 |
| 26 | GO:0032259: methylation | 6.97E-04 |
| 27 | GO:1900865: chloroplast RNA modification | 1.12E-03 |
| 28 | GO:0046686: response to cadmium ion | 1.20E-03 |
| 29 | GO:0006541: glutamine metabolic process | 1.76E-03 |
| 30 | GO:0010030: positive regulation of seed germination | 1.89E-03 |
| 31 | GO:0051302: regulation of cell division | 2.33E-03 |
| 32 | GO:0061077: chaperone-mediated protein folding | 2.48E-03 |
| 33 | GO:0000413: protein peptidyl-prolyl isomerization | 3.30E-03 |
| 34 | GO:0080156: mitochondrial mRNA modification | 4.00E-03 |
| 35 | GO:0016049: cell growth | 5.97E-03 |
| 36 | GO:0048527: lateral root development | 6.83E-03 |
| 37 | GO:0000154: rRNA modification | 9.42E-03 |
| 38 | GO:0006457: protein folding | 1.31E-02 |
| 39 | GO:0006414: translational elongation | 1.51E-02 |
| 40 | GO:0000398: mRNA splicing, via spliceosome | 1.52E-02 |
| 41 | GO:0007166: cell surface receptor signaling pathway | 2.23E-02 |
| 42 | GO:0008380: RNA splicing | 2.29E-02 |
| 43 | GO:0009723: response to ethylene | 3.06E-02 |
| 44 | GO:0009408: response to heat | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0102522: tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity | 0.00E+00 |
| 3 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 4 | GO:0000166: nucleotide binding | 1.07E-09 |
| 5 | GO:0003723: RNA binding | 4.59E-06 |
| 6 | GO:0043021: ribonucleoprotein complex binding | 9.09E-05 |
| 7 | GO:0003938: IMP dehydrogenase activity | 9.09E-05 |
| 8 | GO:0008026: ATP-dependent helicase activity | 9.51E-05 |
| 9 | GO:0008168: methyltransferase activity | 3.26E-04 |
| 10 | GO:0004004: ATP-dependent RNA helicase activity | 3.63E-04 |
| 11 | GO:0050897: cobalt ion binding | 4.64E-04 |
| 12 | GO:0016462: pyrophosphatase activity | 4.92E-04 |
| 13 | GO:0003746: translation elongation factor activity | 5.07E-04 |
| 14 | GO:0030515: snoRNA binding | 6.87E-04 |
| 15 | GO:0004519: endonuclease activity | 8.16E-04 |
| 16 | GO:0051082: unfolded protein binding | 1.20E-03 |
| 17 | GO:0044183: protein binding involved in protein folding | 1.36E-03 |
| 18 | GO:0009982: pseudouridine synthase activity | 1.62E-03 |
| 19 | GO:0003729: mRNA binding | 6.00E-03 |
| 20 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 7.51E-03 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 22 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.07E-02 |
| 23 | GO:0005524: ATP binding | 1.53E-02 |
| 24 | GO:0019843: rRNA binding | 1.61E-02 |
| 25 | GO:0003924: GTPase activity | 4.25E-02 |
| 26 | GO:0016787: hydrolase activity | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 2.37E-06 |
| 3 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.79E-05 |
| 4 | GO:0032040: small-subunit processome | 3.99E-05 |
| 5 | GO:0070545: PeBoW complex | 9.09E-05 |
| 6 | GO:0031429: box H/ACA snoRNP complex | 2.33E-04 |
| 7 | GO:0031428: box C/D snoRNP complex | 4.92E-04 |
| 8 | GO:0030687: preribosome, large subunit precursor | 6.87E-04 |
| 9 | GO:0005739: mitochondrion | 8.97E-04 |
| 10 | GO:0005747: mitochondrial respiratory chain complex I | 1.04E-03 |
| 11 | GO:0005834: heterotrimeric G-protein complex | 1.07E-03 |
| 12 | GO:0005618: cell wall | 1.11E-03 |
| 13 | GO:0005759: mitochondrial matrix | 1.86E-03 |
| 14 | GO:0019898: extrinsic component of membrane | 3.82E-03 |
| 15 | GO:0005774: vacuolar membrane | 4.01E-03 |
| 16 | GO:0005681: spliceosomal complex | 1.20E-02 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 18 | GO:0005829: cytosol | 1.82E-02 |
| 19 | GO:0005634: nucleus | 1.92E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 2.47E-02 |
| 21 | GO:0009536: plastid | 2.52E-02 |
| 22 | GO:0009505: plant-type cell wall | 2.57E-02 |
| 23 | GO:0009941: chloroplast envelope | 2.57E-02 |
| 24 | GO:0005773: vacuole | 2.99E-02 |
| 25 | GO:0005743: mitochondrial inner membrane | 4.03E-02 |