co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G19190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090352: regulation of nitrate assimilation	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0006005: L-fucose biosynthetic process	0.00E+00
4	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
5	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
6	GO:2000035: regulation of stem cell division	0.00E+00
7	GO:0010247: detection of phosphate ion	0.00E+00
8	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
9	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
10	GO:0045730: respiratory burst	0.00E+00
11	GO:0032499: detection of peptidoglycan	0.00E+00
12	GO:2001143: N-methylnicotinate transport	0.00E+00
13	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
14	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
15	GO:0009699: phenylpropanoid biosynthetic process	2.85E-08
16	GO:0033358: UDP-L-arabinose biosynthetic process	1.19E-07
17	GO:0045227: capsule polysaccharide biosynthetic process	1.19E-07
18	GO:0009225: nucleotide-sugar metabolic process	5.11E-07
19	GO:0002679: respiratory burst involved in defense response	1.38E-05
20	GO:0006012: galactose metabolic process	6.84E-05
21	GO:0009808: lignin metabolic process	1.81E-04
22	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.84E-04
23	GO:0010113: negative regulation of systemic acquired resistance	1.84E-04
24	GO:0018920: glyphosate metabolic process	1.84E-04
25	GO:0051014: actin filament severing	1.84E-04
26	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.84E-04
27	GO:0046244: salicylic acid catabolic process	1.84E-04
28	GO:0099636: cytoplasmic streaming	1.84E-04
29	GO:0032491: detection of molecule of fungal origin	1.84E-04
30	GO:0006083: acetate metabolic process	1.84E-04
31	GO:2000069: regulation of post-embryonic root development	1.84E-04
32	GO:0042350: GDP-L-fucose biosynthetic process	1.84E-04
33	GO:0019567: arabinose biosynthetic process	1.84E-04
34	GO:0080167: response to karrikin	2.44E-04
35	GO:0009845: seed germination	3.43E-04
36	GO:0009698: phenylpropanoid metabolic process	3.60E-04
37	GO:0009073: aromatic amino acid family biosynthetic process	3.60E-04
38	GO:0010372: positive regulation of gibberellin biosynthetic process	4.15E-04
39	GO:0052542: defense response by callose deposition	4.15E-04
40	GO:0046939: nucleotide phosphorylation	4.15E-04
41	GO:0010155: regulation of proton transport	4.15E-04
42	GO:0009805: coumarin biosynthetic process	4.15E-04
43	GO:0050684: regulation of mRNA processing	4.15E-04
44	GO:0006468: protein phosphorylation	6.21E-04
45	GO:0032784: regulation of DNA-templated transcription, elongation	6.76E-04
46	GO:0010165: response to X-ray	6.76E-04
47	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.76E-04
48	GO:0010447: response to acidic pH	6.76E-04
49	GO:0016310: phosphorylation	7.49E-04
50	GO:0009800: cinnamic acid biosynthetic process	9.65E-04
51	GO:0051131: chaperone-mediated protein complex assembly	9.65E-04
52	GO:0071323: cellular response to chitin	9.65E-04
53	GO:0046836: glycolipid transport	9.65E-04
54	GO:0007231: osmosensory signaling pathway	9.65E-04
55	GO:0009686: gibberellin biosynthetic process	1.04E-03
56	GO:2000122: negative regulation of stomatal complex development	1.28E-03
57	GO:0033500: carbohydrate homeostasis	1.28E-03
58	GO:0071219: cellular response to molecule of bacterial origin	1.28E-03
59	GO:1902347: response to strigolactone	1.28E-03
60	GO:0033320: UDP-D-xylose biosynthetic process	1.28E-03
61	GO:0051764: actin crosslink formation	1.28E-03
62	GO:0009611: response to wounding	1.42E-03
63	GO:0043484: regulation of RNA splicing	1.63E-03
64	GO:0030041: actin filament polymerization	1.63E-03
65	GO:0002229: defense response to oomycetes	1.74E-03
66	GO:0048317: seed morphogenesis	2.01E-03
67	GO:0006559: L-phenylalanine catabolic process	2.01E-03
68	GO:0033365: protein localization to organelle	2.01E-03
69	GO:0010337: regulation of salicylic acid metabolic process	2.01E-03
70	GO:0050665: hydrogen peroxide biosynthetic process	2.01E-03
71	GO:0042732: D-xylose metabolic process	2.01E-03
72	GO:0010286: heat acclimation	2.23E-03
73	GO:0009423: chorismate biosynthetic process	2.41E-03
74	GO:0009408: response to heat	2.43E-03
75	GO:0001666: response to hypoxia	2.50E-03
76	GO:0009615: response to virus	2.50E-03
77	GO:0051693: actin filament capping	2.83E-03
78	GO:0080186: developmental vegetative growth	2.83E-03
79	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.83E-03
80	GO:0010044: response to aluminum ion	2.83E-03
81	GO:0098869: cellular oxidant detoxification	2.83E-03
82	GO:0006744: ubiquinone biosynthetic process	2.83E-03
83	GO:1900056: negative regulation of leaf senescence	2.83E-03
84	GO:0016049: cell growth	3.09E-03
85	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.28E-03
86	GO:0006402: mRNA catabolic process	3.28E-03
87	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.28E-03
88	GO:0009819: drought recovery	3.28E-03
89	GO:2000070: regulation of response to water deprivation	3.28E-03
90	GO:0050821: protein stabilization	3.28E-03
91	GO:0045010: actin nucleation	3.28E-03
92	GO:0048658: anther wall tapetum development	3.28E-03
93	GO:0007166: cell surface receptor signaling pathway	3.59E-03
94	GO:0010052: guard cell differentiation	3.75E-03
95	GO:0051865: protein autoubiquitination	4.25E-03
96	GO:0048589: developmental growth	4.25E-03
97	GO:0007062: sister chromatid cohesion	4.25E-03
98	GO:0030042: actin filament depolymerization	4.76E-03
99	GO:0008202: steroid metabolic process	4.76E-03
100	GO:0090332: stomatal closure	4.76E-03
101	GO:0007064: mitotic sister chromatid cohesion	5.30E-03
102	GO:0019538: protein metabolic process	5.30E-03
103	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.30E-03
104	GO:0043069: negative regulation of programmed cell death	5.30E-03
105	GO:0072593: reactive oxygen species metabolic process	5.85E-03
106	GO:0009750: response to fructose	5.85E-03
107	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.43E-03
108	GO:0016925: protein sumoylation	6.43E-03
109	GO:0000266: mitochondrial fission	6.43E-03
110	GO:2000028: regulation of photoperiodism, flowering	7.03E-03
111	GO:0050826: response to freezing	7.03E-03
112	GO:0046274: lignin catabolic process	7.03E-03
113	GO:0055046: microgametogenesis	7.03E-03
114	GO:0010200: response to chitin	7.23E-03
115	GO:0046777: protein autophosphorylation	7.54E-03
116	GO:0034605: cellular response to heat	7.64E-03
117	GO:0007015: actin filament organization	7.64E-03
118	GO:0006446: regulation of translational initiation	7.64E-03
119	GO:0006302: double-strand break repair	7.64E-03
120	GO:0090351: seedling development	8.27E-03
121	GO:0070588: calcium ion transmembrane transport	8.27E-03
122	GO:0046854: phosphatidylinositol phosphorylation	8.27E-03
123	GO:0006457: protein folding	8.59E-03
124	GO:0080147: root hair cell development	9.60E-03
125	GO:0007010: cytoskeleton organization	9.60E-03
126	GO:0010187: negative regulation of seed germination	9.60E-03
127	GO:0051017: actin filament bundle assembly	9.60E-03
128	GO:0006487: protein N-linked glycosylation	9.60E-03
129	GO:0046686: response to cadmium ion	1.02E-02
130	GO:0006874: cellular calcium ion homeostasis	1.03E-02
131	GO:0009742: brassinosteroid mediated signaling pathway	1.08E-02
132	GO:0061077: chaperone-mediated protein folding	1.10E-02
133	GO:0003333: amino acid transmembrane transport	1.10E-02
134	GO:0048511: rhythmic process	1.10E-02
135	GO:0071215: cellular response to abscisic acid stimulus	1.25E-02
136	GO:0009411: response to UV	1.25E-02
137	GO:0040007: growth	1.25E-02
138	GO:0006817: phosphate ion transport	1.32E-02
139	GO:0009561: megagametogenesis	1.32E-02
140	GO:0009306: protein secretion	1.32E-02
141	GO:0000271: polysaccharide biosynthetic process	1.48E-02
142	GO:0006606: protein import into nucleus	1.48E-02
143	GO:0042631: cellular response to water deprivation	1.48E-02
144	GO:0009960: endosperm development	1.56E-02
145	GO:0045489: pectin biosynthetic process	1.56E-02
146	GO:0006885: regulation of pH	1.56E-02
147	GO:0010182: sugar mediated signaling pathway	1.56E-02
148	GO:0048868: pollen tube development	1.56E-02
149	GO:0009873: ethylene-activated signaling pathway	1.57E-02
150	GO:0016036: cellular response to phosphate starvation	1.64E-02
151	GO:0048544: recognition of pollen	1.64E-02
152	GO:0007059: chromosome segregation	1.64E-02
153	GO:0010183: pollen tube guidance	1.73E-02
154	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.81E-02
155	GO:0006891: intra-Golgi vesicle-mediated transport	1.81E-02
156	GO:0031047: gene silencing by RNA	1.90E-02
157	GO:0032502: developmental process	1.90E-02
158	GO:0071281: cellular response to iron ion	1.99E-02
159	GO:0010090: trichome morphogenesis	1.99E-02
160	GO:1901657: glycosyl compound metabolic process	1.99E-02
161	GO:0006904: vesicle docking involved in exocytosis	2.17E-02
162	GO:0016579: protein deubiquitination	2.26E-02
163	GO:0009555: pollen development	2.35E-02
164	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.45E-02
165	GO:0009816: defense response to bacterium, incompatible interaction	2.45E-02
166	GO:0048573: photoperiodism, flowering	2.64E-02
167	GO:0009817: defense response to fungus, incompatible interaction	2.84E-02
168	GO:0048481: plant ovule development	2.84E-02
169	GO:0008219: cell death	2.84E-02
170	GO:0009832: plant-type cell wall biogenesis	2.94E-02
171	GO:0048767: root hair elongation	2.94E-02
172	GO:0009813: flavonoid biosynthetic process	2.94E-02
173	GO:0010119: regulation of stomatal movement	3.15E-02
174	GO:0009910: negative regulation of flower development	3.15E-02
175	GO:0009723: response to ethylene	3.16E-02
176	GO:0048366: leaf development	3.22E-02
177	GO:0000724: double-strand break repair via homologous recombination	3.26E-02
178	GO:0006865: amino acid transport	3.26E-02
179	GO:0045087: innate immune response	3.36E-02
180	GO:0016051: carbohydrate biosynthetic process	3.36E-02
181	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.50E-02
182	GO:0006952: defense response	3.52E-02
183	GO:0006839: mitochondrial transport	3.69E-02
184	GO:0006631: fatty acid metabolic process	3.80E-02
185	GO:0006887: exocytosis	3.80E-02
186	GO:0009744: response to sucrose	4.03E-02
187	GO:0006886: intracellular protein transport	4.17E-02
188	GO:0006812: cation transport	4.73E-02
189	GO:0009664: plant-type cell wall organization	4.73E-02
190	GO:0009809: lignin biosynthetic process	4.98E-02
191	GO:0006486: protein glycosylation	4.98E-02
192	GO:0006813: potassium ion transport	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
2	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
3	GO:0046409: p-coumarate 3-hydroxylase activity	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
6	GO:0090416: nicotinate transporter activity	0.00E+00
7	GO:0005524: ATP binding	2.00E-08
8	GO:0050373: UDP-arabinose 4-epimerase activity	1.19E-07
9	GO:0016301: kinase activity	1.37E-07
10	GO:0003978: UDP-glucose 4-epimerase activity	9.36E-07
11	GO:0004674: protein serine/threonine kinase activity	3.55E-05
12	GO:0051669: fructan beta-fructosidase activity	1.84E-04
13	GO:0031219: levanase activity	1.84E-04
14	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	1.84E-04
15	GO:0050577: GDP-L-fucose synthase activity	1.84E-04
16	GO:0003987: acetate-CoA ligase activity	1.84E-04
17	GO:0016207: 4-coumarate-CoA ligase activity	2.21E-04
18	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.15E-04
19	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	4.15E-04
20	GO:0016174: NAD(P)H oxidase activity	6.76E-04
21	GO:0045548: phenylalanine ammonia-lyase activity	6.76E-04
22	GO:0019201: nucleotide kinase activity	9.65E-04
23	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	9.65E-04
24	GO:0019789: SUMO transferase activity	9.65E-04
25	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	9.65E-04
26	GO:0017089: glycolipid transporter activity	9.65E-04
27	GO:0019199: transmembrane receptor protein kinase activity	1.28E-03
28	GO:0051861: glycolipid binding	1.28E-03
29	GO:0016874: ligase activity	1.40E-03
30	GO:0047631: ADP-ribose diphosphatase activity	1.63E-03
31	GO:0002020: protease binding	1.63E-03
32	GO:0016208: AMP binding	2.01E-03
33	GO:0048040: UDP-glucuronate decarboxylase activity	2.01E-03
34	GO:0004017: adenylate kinase activity	2.41E-03
35	GO:0004656: procollagen-proline 4-dioxygenase activity	2.41E-03
36	GO:0070403: NAD+ binding	2.41E-03
37	GO:0004143: diacylglycerol kinase activity	2.83E-03
38	GO:0004525: ribonuclease III activity	3.28E-03
39	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.28E-03
40	GO:0004564: beta-fructofuranosidase activity	3.28E-03
41	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.75E-03
42	GO:0003951: NAD+ kinase activity	3.75E-03
43	GO:0008142: oxysterol binding	3.75E-03
44	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.76E-03
45	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.12E-03
46	GO:0004575: sucrose alpha-glucosidase activity	4.76E-03
47	GO:0003682: chromatin binding	5.66E-03
48	GO:0008378: galactosyltransferase activity	6.43E-03
49	GO:0005388: calcium-transporting ATPase activity	7.03E-03
50	GO:0008139: nuclear localization sequence binding	7.03E-03
51	GO:0031072: heat shock protein binding	7.03E-03
52	GO:0008061: chitin binding	8.27E-03
53	GO:0005217: intracellular ligand-gated ion channel activity	8.27E-03
54	GO:0004970: ionotropic glutamate receptor activity	8.27E-03
55	GO:0004842: ubiquitin-protein transferase activity	8.32E-03
56	GO:0030246: carbohydrate binding	9.11E-03
57	GO:0003729: mRNA binding	9.46E-03
58	GO:0031418: L-ascorbic acid binding	9.60E-03
59	GO:0003779: actin binding	9.87E-03
60	GO:0051082: unfolded protein binding	1.02E-02
61	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.10E-02
62	GO:0033612: receptor serine/threonine kinase binding	1.10E-02
63	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.10E-02
64	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.17E-02
65	GO:0016758: transferase activity, transferring hexosyl groups	1.24E-02
66	GO:0022891: substrate-specific transmembrane transporter activity	1.25E-02
67	GO:0016757: transferase activity, transferring glycosyl groups	1.40E-02
68	GO:0005451: monovalent cation:proton antiporter activity	1.48E-02
69	GO:0008565: protein transporter activity	1.53E-02
70	GO:0001085: RNA polymerase II transcription factor binding	1.56E-02
71	GO:0008536: Ran GTPase binding	1.56E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.64E-02
73	GO:0015299: solute:proton antiporter activity	1.64E-02
74	GO:0050662: coenzyme binding	1.64E-02
75	GO:0016853: isomerase activity	1.64E-02
76	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.81E-02
77	GO:0004518: nuclease activity	1.90E-02
78	GO:0003824: catalytic activity	1.94E-02
79	GO:0015385: sodium:proton antiporter activity	1.99E-02
80	GO:0051015: actin filament binding	1.99E-02
81	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.17E-02
82	GO:0042802: identical protein binding	2.24E-02
83	GO:0008375: acetylglucosaminyltransferase activity	2.55E-02
84	GO:0102483: scopolin beta-glucosidase activity	2.64E-02
85	GO:0030247: polysaccharide binding	2.64E-02
86	GO:0004601: peroxidase activity	2.73E-02
87	GO:0004222: metalloendopeptidase activity	3.05E-02
88	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.15E-02
89	GO:0050660: flavin adenine dinucleotide binding	3.16E-02
90	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.32E-02
91	GO:0008422: beta-glucosidase activity	3.58E-02
92	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.58E-02
93	GO:0005515: protein binding	3.81E-02
94	GO:0005516: calmodulin binding	3.90E-02
95	GO:0004871: signal transducer activity	4.24E-02
96	GO:0035091: phosphatidylinositol binding	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.52E-09
2	GO:0016021: integral component of membrane	1.35E-06
3	GO:0032580: Golgi cisterna membrane	9.97E-06
4	GO:0016442: RISC complex	1.84E-04
5	GO:0005794: Golgi apparatus	1.31E-03
6	GO:0030915: Smc5-Smc6 complex	1.63E-03
7	GO:0016363: nuclear matrix	2.41E-03
8	GO:0009514: glyoxysome	3.75E-03
9	GO:0010494: cytoplasmic stress granule	4.25E-03
10	GO:0090404: pollen tube tip	5.85E-03
11	GO:0005884: actin filament	5.85E-03
12	GO:0048471: perinuclear region of cytoplasm	5.85E-03
13	GO:0005618: cell wall	6.77E-03
14	GO:0031012: extracellular matrix	7.03E-03
15	GO:0005795: Golgi stack	8.27E-03
16	GO:0005783: endoplasmic reticulum	8.89E-03
17	GO:0043234: protein complex	8.93E-03
18	GO:0005789: endoplasmic reticulum membrane	9.90E-03
19	GO:0005741: mitochondrial outer membrane	1.10E-02
20	GO:0005770: late endosome	1.56E-02
21	GO:0031965: nuclear membrane	1.73E-02
22	GO:0000145: exocyst	1.90E-02
23	GO:0000932: P-body	2.35E-02
24	GO:0005788: endoplasmic reticulum lumen	2.45E-02
25	GO:0005667: transcription factor complex	2.55E-02
26	GO:0090406: pollen tube	4.03E-02
27	GO:0005856: cytoskeleton	4.38E-02
28	GO:0031966: mitochondrial membrane	4.73E-02
29	GO:0005768: endosome	4.92E-02