Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G18560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0031116: positive regulation of microtubule polymerization0.00E+00
3GO:0006907: pinocytosis0.00E+00
4GO:0009946: proximal/distal axis specification0.00E+00
5GO:0009583: detection of light stimulus0.00E+00
6GO:0007037: vacuolar phosphate transport0.00E+00
7GO:0000741: karyogamy2.87E-05
8GO:0072387: flavin adenine dinucleotide metabolic process1.16E-04
9GO:0048438: floral whorl development1.16E-04
10GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole2.69E-04
11GO:0010617: circadian regulation of calcium ion oscillation2.69E-04
12GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation2.69E-04
13GO:0099402: plant organ development2.69E-04
14GO:0010343: singlet oxygen-mediated programmed cell death2.69E-04
15GO:1901529: positive regulation of anion channel activity2.69E-04
16GO:0001578: microtubule bundle formation4.45E-04
17GO:0010338: leaf formation4.45E-04
18GO:1902448: positive regulation of shade avoidance4.45E-04
19GO:1901672: positive regulation of systemic acquired resistance4.45E-04
20GO:1901332: negative regulation of lateral root development6.38E-04
21GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.38E-04
22GO:1902476: chloride transmembrane transport6.38E-04
23GO:0009958: positive gravitropism7.67E-04
24GO:0010197: polar nucleus fusion7.67E-04
25GO:0005975: carbohydrate metabolic process8.03E-04
26GO:1902347: response to strigolactone8.47E-04
27GO:0071421: manganese ion transmembrane transport8.47E-04
28GO:0051322: anaphase8.47E-04
29GO:0031935: regulation of chromatin silencing8.47E-04
30GO:0045088: regulation of innate immune response8.47E-04
31GO:1901601: strigolactone biosynthetic process8.47E-04
32GO:0007020: microtubule nucleation8.47E-04
33GO:0046785: microtubule polymerization1.07E-03
34GO:0010117: photoprotection1.07E-03
35GO:0046283: anthocyanin-containing compound metabolic process1.07E-03
36GO:0016123: xanthophyll biosynthetic process1.07E-03
37GO:0009616: virus induced gene silencing1.07E-03
38GO:0000910: cytokinesis1.26E-03
39GO:0060918: auxin transport1.31E-03
40GO:0009959: negative gravitropism1.31E-03
41GO:0035194: posttranscriptional gene silencing by RNA1.31E-03
42GO:1901371: regulation of leaf morphogenesis1.31E-03
43GO:0016126: sterol biosynthetic process1.33E-03
44GO:0009451: RNA modification1.38E-03
45GO:0010076: maintenance of floral meristem identity1.56E-03
46GO:0010310: regulation of hydrogen peroxide metabolic process1.56E-03
47GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.56E-03
48GO:0006821: chloride transport1.84E-03
49GO:0030026: cellular manganese ion homeostasis1.84E-03
50GO:0051510: regulation of unidimensional cell growth1.84E-03
51GO:0006880: intracellular sequestering of iron ion1.84E-03
52GO:0048528: post-embryonic root development1.84E-03
53GO:1900056: negative regulation of leaf senescence1.84E-03
54GO:0080111: DNA demethylation1.84E-03
55GO:0009910: negative regulation of flower development1.99E-03
56GO:0009704: de-etiolation2.13E-03
57GO:0010928: regulation of auxin mediated signaling pathway2.13E-03
58GO:0009640: photomorphogenesis2.80E-03
59GO:0008356: asymmetric cell division3.07E-03
60GO:1900426: positive regulation of defense response to bacterium3.07E-03
61GO:0009638: phototropism3.07E-03
62GO:0010380: regulation of chlorophyll biosynthetic process3.07E-03
63GO:0045036: protein targeting to chloroplast3.41E-03
64GO:0010582: floral meristem determinacy4.13E-03
65GO:0010075: regulation of meristem growth4.50E-03
66GO:0009725: response to hormone4.50E-03
67GO:0009767: photosynthetic electron transport chain4.50E-03
68GO:0009785: blue light signaling pathway4.50E-03
69GO:0010223: secondary shoot formation4.89E-03
70GO:0009266: response to temperature stimulus4.89E-03
71GO:0010039: response to iron ion5.29E-03
72GO:0071732: cellular response to nitric oxide5.29E-03
73GO:0009944: polarity specification of adaxial/abaxial axis6.12E-03
74GO:0006289: nucleotide-excision repair6.12E-03
75GO:2000377: regulation of reactive oxygen species metabolic process6.12E-03
76GO:0007010: cytoskeleton organization6.12E-03
77GO:0043622: cortical microtubule organization6.56E-03
78GO:0007017: microtubule-based process6.56E-03
79GO:0071369: cellular response to ethylene stimulus7.92E-03
80GO:0010118: stomatal movement9.38E-03
81GO:0042752: regulation of circadian rhythm1.04E-02
82GO:0009646: response to absence of light1.04E-02
83GO:0007166: cell surface receptor signaling pathway1.05E-02
84GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.15E-02
85GO:0016032: viral process1.20E-02
86GO:0007264: small GTPase mediated signal transduction1.20E-02
87GO:0071281: cellular response to iron ion1.26E-02
88GO:0009639: response to red or far red light1.31E-02
89GO:0009615: response to virus1.49E-02
90GO:0080167: response to karrikin1.78E-02
91GO:0018298: protein-chromophore linkage1.80E-02
92GO:0046777: protein autophosphorylation1.90E-02
93GO:0010218: response to far red light1.92E-02
94GO:0006811: ion transport1.92E-02
95GO:0009637: response to blue light2.12E-02
96GO:0045892: negative regulation of transcription, DNA-templated2.16E-02
97GO:0006839: mitochondrial transport2.33E-02
98GO:0008283: cell proliferation2.54E-02
99GO:0010114: response to red light2.54E-02
100GO:0009744: response to sucrose2.54E-02
101GO:0009644: response to high light intensity2.69E-02
102GO:0009965: leaf morphogenesis2.76E-02
103GO:0006260: DNA replication2.91E-02
104GO:0000165: MAPK cascade2.91E-02
105GO:0009733: response to auxin2.92E-02
106GO:0051603: proteolysis involved in cellular protein catabolic process3.22E-02
107GO:0009734: auxin-activated signaling pathway3.69E-02
108GO:0006810: transport4.06E-02
109GO:0006396: RNA processing4.13E-02
110GO:0009742: brassinosteroid mediated signaling pathway4.21E-02
RankGO TermAdjusted P value
1GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
2GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity0.00E+00
3GO:1990534: thermospermine oxidase activity0.00E+00
4GO:0004518: nuclease activity6.47E-05
5GO:0015929: hexosaminidase activity2.69E-04
6GO:0004563: beta-N-acetylhexosaminidase activity2.69E-04
7GO:0000900: translation repressor activity, nucleic acid binding4.45E-04
8GO:0004848: ureidoglycolate hydrolase activity4.45E-04
9GO:0019003: GDP binding4.45E-04
10GO:0009882: blue light photoreceptor activity6.38E-04
11GO:0000254: C-4 methylsterol oxidase activity6.38E-04
12GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.18E-04
13GO:0009044: xylan 1,4-beta-xylosidase activity8.47E-04
14GO:0005253: anion channel activity8.47E-04
15GO:0005247: voltage-gated chloride channel activity1.31E-03
16GO:0004525: ribonuclease III activity2.13E-03
17GO:0003724: RNA helicase activity2.43E-03
18GO:0016491: oxidoreductase activity2.45E-03
19GO:0071949: FAD binding2.74E-03
20GO:0005381: iron ion transmembrane transporter activity3.07E-03
21GO:0005384: manganese ion transmembrane transporter activity3.07E-03
22GO:0008131: primary amine oxidase activity4.89E-03
23GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.89E-03
24GO:0004519: endonuclease activity5.56E-03
25GO:0003887: DNA-directed DNA polymerase activity5.70E-03
26GO:0035251: UDP-glucosyltransferase activity7.00E-03
27GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.59E-03
28GO:0008017: microtubule binding9.65E-03
29GO:0010181: FMN binding1.04E-02
30GO:0004872: receptor activity1.09E-02
31GO:0004672: protein kinase activity1.13E-02
32GO:0048038: quinone binding1.15E-02
33GO:0008483: transaminase activity1.37E-02
34GO:0042803: protein homodimerization activity2.23E-02
35GO:0004712: protein serine/threonine/tyrosine kinase activity2.26E-02
36GO:0051539: 4 iron, 4 sulfur cluster binding2.33E-02
37GO:0004185: serine-type carboxypeptidase activity2.54E-02
38GO:0003690: double-stranded DNA binding3.22E-02
39GO:0003777: microtubule motor activity3.38E-02
40GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.63E-02
41GO:0003677: DNA binding3.69E-02
42GO:0004650: polygalacturonase activity3.79E-02
43GO:0022857: transmembrane transporter activity3.87E-02
RankGO TermAdjusted P value
1GO:0030427: site of polarized growth0.00E+00
2GO:0016605: PML body4.45E-04
3GO:0030286: dynein complex8.47E-04
4GO:0072686: mitotic spindle1.07E-03
5GO:0034707: chloride channel complex1.31E-03
6GO:0000793: condensed chromosome1.31E-03
7GO:0009840: chloroplastic endopeptidase Clp complex1.56E-03
8GO:0010005: cortical microtubule, transverse to long axis1.56E-03
9GO:0000123: histone acetyltransferase complex1.84E-03
10GO:0005819: spindle2.38E-03
11GO:0046930: pore complex2.43E-03
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.74E-03
13GO:0016604: nuclear body3.07E-03
14GO:0055028: cortical microtubule3.41E-03
15GO:0009574: preprophase band4.50E-03
16GO:0005578: proteinaceous extracellular matrix4.50E-03
17GO:0005938: cell cortex4.50E-03
18GO:0005875: microtubule associated complex5.70E-03
19GO:0015935: small ribosomal subunit7.00E-03
20GO:0005773: vacuole9.37E-03
21GO:0005874: microtubule1.71E-02
22GO:0043231: intracellular membrane-bounded organelle2.89E-02
23GO:0009505: plant-type cell wall3.34E-02
24GO:0005623: cell4.83E-02
25GO:0009524: phragmoplast4.92E-02
<
Gene type



Gene DE type