Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G16430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
2GO:0080184: response to phenylpropanoid0.00E+00
3GO:0030149: sphingolipid catabolic process0.00E+00
4GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
5GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
6GO:0001881: receptor recycling0.00E+00
7GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
8GO:0006412: translation1.82E-29
9GO:0042254: ribosome biogenesis9.07E-19
10GO:0000027: ribosomal large subunit assembly5.49E-05
11GO:0009735: response to cytokinin8.00E-05
12GO:1901349: glucosinolate transport2.18E-04
13GO:0090449: phloem glucosinolate loading2.18E-04
14GO:1990542: mitochondrial transmembrane transport2.18E-04
15GO:0009245: lipid A biosynthetic process2.82E-04
16GO:0006452: translational frameshifting4.86E-04
17GO:0051788: response to misfolded protein4.86E-04
18GO:0015786: UDP-glucose transport4.86E-04
19GO:0019752: carboxylic acid metabolic process4.86E-04
20GO:0045905: positive regulation of translational termination4.86E-04
21GO:0045901: positive regulation of translational elongation4.86E-04
22GO:0006123: mitochondrial electron transport, cytochrome c to oxygen4.86E-04
23GO:0006820: anion transport5.22E-04
24GO:0006626: protein targeting to mitochondrion5.92E-04
25GO:0009853: photorespiration6.61E-04
26GO:0008333: endosome to lysosome transport7.90E-04
27GO:1902626: assembly of large subunit precursor of preribosome7.90E-04
28GO:0045793: positive regulation of cell size7.90E-04
29GO:0015783: GDP-fucose transport7.90E-04
30GO:0034227: tRNA thio-modification7.90E-04
31GO:0008283: cell proliferation9.07E-04
32GO:0061077: chaperone-mediated protein folding1.10E-03
33GO:0006107: oxaloacetate metabolic process1.13E-03
34GO:0072334: UDP-galactose transmembrane transport1.13E-03
35GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.13E-03
36GO:0009647: skotomorphogenesis1.13E-03
37GO:0006168: adenine salvage1.13E-03
38GO:0001676: long-chain fatty acid metabolic process1.13E-03
39GO:0032877: positive regulation of DNA endoreduplication1.13E-03
40GO:0006166: purine ribonucleoside salvage1.13E-03
41GO:0051603: proteolysis involved in cellular protein catabolic process1.37E-03
42GO:0051781: positive regulation of cell division1.50E-03
43GO:0010363: regulation of plant-type hypersensitive response1.50E-03
44GO:0044209: AMP salvage1.91E-03
45GO:0036065: fucosylation1.91E-03
46GO:0018279: protein N-linked glycosylation via asparagine1.91E-03
47GO:1902183: regulation of shoot apical meristem development1.91E-03
48GO:0043248: proteasome assembly2.35E-03
49GO:0009635: response to herbicide2.35E-03
50GO:0009955: adaxial/abaxial pattern specification2.83E-03
51GO:1901001: negative regulation of response to salt stress2.83E-03
52GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.83E-03
53GO:0006869: lipid transport2.93E-03
54GO:0048528: post-embryonic root development3.33E-03
55GO:1900056: negative regulation of leaf senescence3.33E-03
56GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.33E-03
57GO:0006511: ubiquitin-dependent protein catabolic process3.59E-03
58GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.86E-03
59GO:0009642: response to light intensity3.86E-03
60GO:0009690: cytokinin metabolic process3.86E-03
61GO:0000028: ribosomal small subunit assembly3.86E-03
62GO:0048658: anther wall tapetum development3.86E-03
63GO:0031540: regulation of anthocyanin biosynthetic process3.86E-03
64GO:0009231: riboflavin biosynthetic process3.86E-03
65GO:0006102: isocitrate metabolic process3.86E-03
66GO:0010417: glucuronoxylan biosynthetic process4.42E-03
67GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.73E-03
68GO:0010043: response to zinc ion4.76E-03
69GO:0098656: anion transmembrane transport5.00E-03
70GO:0080144: amino acid homeostasis5.00E-03
71GO:0015780: nucleotide-sugar transport5.00E-03
72GO:0006099: tricarboxylic acid cycle5.46E-03
73GO:0048354: mucilage biosynthetic process involved in seed coat development5.62E-03
74GO:0006032: chitin catabolic process6.25E-03
75GO:0010015: root morphogenesis6.91E-03
76GO:0006913: nucleocytoplasmic transport6.91E-03
77GO:0000272: polysaccharide catabolic process6.91E-03
78GO:0008643: carbohydrate transport7.28E-03
79GO:0009965: leaf morphogenesis7.56E-03
80GO:0008361: regulation of cell size7.60E-03
81GO:0015706: nitrate transport7.60E-03
82GO:0016925: protein sumoylation7.60E-03
83GO:0006807: nitrogen compound metabolic process8.30E-03
84GO:0006108: malate metabolic process8.30E-03
85GO:0006006: glucose metabolic process8.30E-03
86GO:0002237: response to molecule of bacterial origin9.03E-03
87GO:0007034: vacuolar transport9.03E-03
88GO:0080167: response to karrikin9.40E-03
89GO:0006857: oligopeptide transport9.73E-03
90GO:0009969: xyloglucan biosynthetic process9.79E-03
91GO:0010167: response to nitrate9.79E-03
92GO:0034976: response to endoplasmic reticulum stress1.06E-02
93GO:0006096: glycolytic process1.07E-02
94GO:0009116: nucleoside metabolic process1.14E-02
95GO:0030150: protein import into mitochondrial matrix1.14E-02
96GO:0006289: nucleotide-excision repair1.14E-02
97GO:0048511: rhythmic process1.30E-02
98GO:0007005: mitochondrion organization1.39E-02
99GO:0009408: response to heat1.54E-02
100GO:0010584: pollen exine formation1.57E-02
101GO:0045492: xylan biosynthetic process1.57E-02
102GO:0010089: xylem development1.57E-02
103GO:0042147: retrograde transport, endosome to Golgi1.66E-02
104GO:0010118: stomatal movement1.75E-02
105GO:0015991: ATP hydrolysis coupled proton transport1.75E-02
106GO:0042631: cellular response to water deprivation1.75E-02
107GO:0080022: primary root development1.75E-02
108GO:0000413: protein peptidyl-prolyl isomerization1.75E-02
109GO:0010051: xylem and phloem pattern formation1.75E-02
110GO:0010154: fruit development1.85E-02
111GO:0006520: cellular amino acid metabolic process1.85E-02
112GO:0015986: ATP synthesis coupled proton transport1.95E-02
113GO:0006633: fatty acid biosynthetic process2.04E-02
114GO:0006623: protein targeting to vacuole2.05E-02
115GO:0048825: cotyledon development2.05E-02
116GO:0009749: response to glucose2.05E-02
117GO:0080156: mitochondrial mRNA modification2.15E-02
118GO:0010193: response to ozone2.15E-02
119GO:0030163: protein catabolic process2.36E-02
120GO:0010286: heat acclimation2.57E-02
121GO:0000910: cytokinesis2.68E-02
122GO:0009607: response to biotic stimulus2.91E-02
123GO:0042128: nitrate assimilation3.02E-02
124GO:0055114: oxidation-reduction process3.10E-02
125GO:0009826: unidimensional cell growth3.34E-02
126GO:0009832: plant-type cell wall biogenesis3.49E-02
127GO:0009834: plant-type secondary cell wall biogenesis3.62E-02
128GO:0006811: ion transport3.62E-02
129GO:0006631: fatty acid metabolic process4.51E-02
130GO:0051707: response to other organism4.78E-02
131GO:0009926: auxin polar transport4.78E-02
132GO:0000209: protein polyubiquitination4.91E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0050152: omega-amidase activity0.00E+00
3GO:0004746: riboflavin synthase activity0.00E+00
4GO:0003796: lysozyme activity0.00E+00
5GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
6GO:0003735: structural constituent of ribosome3.59E-38
7GO:0003729: mRNA binding4.08E-09
8GO:0008097: 5S rRNA binding1.87E-05
9GO:0004298: threonine-type endopeptidase activity7.43E-05
10GO:0031177: phosphopantetheine binding8.04E-05
11GO:0000035: acyl binding1.11E-04
12GO:0015288: porin activity1.88E-04
13GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.88E-04
14GO:0090448: glucosinolate:proton symporter activity2.18E-04
15GO:0008308: voltage-gated anion channel activity2.33E-04
16GO:0019843: rRNA binding4.42E-04
17GO:0008805: carbon-monoxide oxygenase activity4.86E-04
18GO:0047517: 1,4-beta-D-xylan synthase activity4.86E-04
19GO:0008517: folic acid transporter activity4.86E-04
20GO:0004618: phosphoglycerate kinase activity4.86E-04
21GO:0015018: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity7.90E-04
22GO:0005457: GDP-fucose transmembrane transporter activity7.90E-04
23GO:0005528: FK506 binding9.15E-04
24GO:0005507: copper ion binding1.03E-03
25GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.10E-03
26GO:0017077: oxidative phosphorylation uncoupler activity1.13E-03
27GO:0004449: isocitrate dehydrogenase (NAD+) activity1.13E-03
28GO:0003999: adenine phosphoribosyltransferase activity1.13E-03
29GO:0005460: UDP-glucose transmembrane transporter activity1.13E-03
30GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.13E-03
31GO:0008514: organic anion transmembrane transporter activity1.42E-03
32GO:0010011: auxin binding1.50E-03
33GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.50E-03
34GO:0070628: proteasome binding1.50E-03
35GO:0008233: peptidase activity1.88E-03
36GO:0005459: UDP-galactose transmembrane transporter activity1.91E-03
37GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.91E-03
38GO:0004040: amidase activity1.91E-03
39GO:0042285: xylosyltransferase activity1.91E-03
40GO:0031386: protein tag1.91E-03
41GO:0031593: polyubiquitin binding2.35E-03
42GO:0102391: decanoate--CoA ligase activity2.83E-03
43GO:0004656: procollagen-proline 4-dioxygenase activity2.83E-03
44GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.33E-03
45GO:0016831: carboxy-lyase activity3.33E-03
46GO:0005338: nucleotide-sugar transmembrane transporter activity3.33E-03
47GO:0004467: long-chain fatty acid-CoA ligase activity3.33E-03
48GO:0052747: sinapyl alcohol dehydrogenase activity3.86E-03
49GO:0043022: ribosome binding3.86E-03
50GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.12E-03
51GO:0008417: fucosyltransferase activity5.00E-03
52GO:0000989: transcription factor activity, transcription factor binding5.00E-03
53GO:0015112: nitrate transmembrane transporter activity5.62E-03
54GO:0008289: lipid binding5.79E-03
55GO:0004568: chitinase activity6.25E-03
56GO:0008794: arsenate reductase (glutaredoxin) activity6.91E-03
57GO:0046961: proton-transporting ATPase activity, rotational mechanism6.91E-03
58GO:0008559: xenobiotic-transporting ATPase activity6.91E-03
59GO:0045551: cinnamyl-alcohol dehydrogenase activity7.60E-03
60GO:0051287: NAD binding8.15E-03
61GO:0015266: protein channel activity8.30E-03
62GO:0008266: poly(U) RNA binding9.03E-03
63GO:0043130: ubiquitin binding1.14E-02
64GO:0031418: L-ascorbic acid binding1.14E-02
65GO:0003756: protein disulfide isomerase activity1.57E-02
66GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.85E-02
67GO:0016853: isomerase activity1.95E-02
68GO:0004872: receptor activity2.05E-02
69GO:0003684: damaged DNA binding2.46E-02
70GO:0050897: cobalt ion binding3.74E-02
71GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.99E-02
72GO:0003746: translation elongation factor activity3.99E-02
73GO:0003697: single-stranded DNA binding3.99E-02
74GO:0008422: beta-glucosidase activity4.25E-02
75GO:0050661: NADP binding4.38E-02
76GO:0004364: glutathione transferase activity4.65E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome1.66E-29
2GO:0005840: ribosome2.08E-29
3GO:0022625: cytosolic large ribosomal subunit7.44E-26
4GO:0022627: cytosolic small ribosomal subunit3.12E-16
5GO:0005774: vacuolar membrane1.91E-14
6GO:0005829: cytosol3.99E-10
7GO:0009506: plasmodesma8.57E-10
8GO:0005773: vacuole5.22E-09
9GO:0015934: large ribosomal subunit8.42E-08
10GO:0000502: proteasome complex6.59E-07
11GO:0005730: nucleolus6.87E-07
12GO:0016020: membrane2.63E-06
13GO:0005783: endoplasmic reticulum6.89E-06
14GO:0005788: endoplasmic reticulum lumen2.63E-05
15GO:0005737: cytoplasm4.31E-05
16GO:0070469: respiratory chain6.42E-05
17GO:0005839: proteasome core complex7.43E-05
18GO:0005618: cell wall1.59E-04
19GO:0046930: pore complex2.33E-04
20GO:0005794: Golgi apparatus5.54E-04
21GO:0046861: glyoxysomal membrane7.90E-04
22GO:0005758: mitochondrial intermembrane space9.15E-04
23GO:0045271: respiratory chain complex I1.01E-03
24GO:0005741: mitochondrial outer membrane1.10E-03
25GO:0033180: proton-transporting V-type ATPase, V1 domain1.13E-03
26GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.50E-03
27GO:0005747: mitochondrial respiratory chain complex I1.69E-03
28GO:0008250: oligosaccharyltransferase complex1.91E-03
29GO:0009507: chloroplast2.19E-03
30GO:0030904: retromer complex2.35E-03
31GO:0005771: multivesicular body2.35E-03
32GO:0005886: plasma membrane3.45E-03
33GO:0045273: respiratory chain complex II3.86E-03
34GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)3.86E-03
35GO:0009514: glyoxysome4.42E-03
36GO:0005742: mitochondrial outer membrane translocase complex4.42E-03
37GO:0031090: organelle membrane5.00E-03
38GO:0008541: proteasome regulatory particle, lid subcomplex6.91E-03
39GO:0031966: mitochondrial membrane8.45E-03
40GO:0005750: mitochondrial respiratory chain complex III9.03E-03
41GO:0005753: mitochondrial proton-transporting ATP synthase complex9.79E-03
42GO:0015935: small ribosomal subunit1.30E-02
43GO:0005743: mitochondrial inner membrane1.41E-02
44GO:0005759: mitochondrial matrix2.04E-02
45GO:0032580: Golgi cisterna membrane2.46E-02
46GO:0009707: chloroplast outer membrane3.37E-02
47GO:0000325: plant-type vacuole3.74E-02
48GO:0005789: endoplasmic reticulum membrane4.47E-02
49GO:0031902: late endosome membrane4.51E-02
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Gene type



Gene DE type