co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
2	GO:0033206: meiotic cytokinesis	8.12E-06
3	GO:0006808: regulation of nitrogen utilization	8.58E-05
4	GO:0046907: intracellular transport	1.12E-04
5	GO:0051568: histone H3-K4 methylation	1.41E-04
6	GO:2000033: regulation of seed dormancy process	1.71E-04
7	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	2.37E-04
8	GO:0010233: phloem transport	2.71E-04
9	GO:0080188: RNA-directed DNA methylation	5.80E-04
10	GO:0034976: response to endoplasmic reticulum stress	6.22E-04
11	GO:2000377: regulation of reactive oxygen species metabolic process	6.66E-04
12	GO:0009863: salicylic acid mediated signaling pathway	6.66E-04
13	GO:0010187: negative regulation of seed germination	6.66E-04
14	GO:0016575: histone deacetylation	7.09E-04
15	GO:0006306: DNA methylation	7.53E-04
16	GO:0051028: mRNA transport	9.38E-04
17	GO:0031047: gene silencing by RNA	1.23E-03
18	GO:0010029: regulation of seed germination	1.56E-03
19	GO:0010218: response to far red light	1.91E-03
20	GO:0009867: jasmonic acid mediated signaling pathway	2.10E-03
21	GO:0006839: mitochondrial transport	2.29E-03
22	GO:0042538: hyperosmotic salinity response	2.90E-03
23	GO:0009740: gibberellic acid mediated signaling pathway	3.71E-03
24	GO:0009451: RNA modification	5.70E-03
25	GO:0009739: response to gibberellin	6.06E-03
26	GO:0009723: response to ethylene	8.41E-03
27	GO:0045454: cell redox homeostasis	1.00E-02
28	GO:0032259: methylation	1.13E-02
29	GO:0048364: root development	1.20E-02
30	GO:0006457: protein folding	2.09E-02
31	GO:0006355: regulation of transcription, DNA-templated	2.79E-02
32	GO:0015031: protein transport	3.42E-02
33	GO:0006810: transport	3.79E-02
34	GO:0005975: carbohydrate metabolic process	3.88E-02
35	GO:0007275: multicellular organism development	4.67E-02
36	GO:0009737: response to abscisic acid	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.19E-05
2	GO:0015929: hexosaminidase activity	2.19E-05
3	GO:0004563: beta-N-acetylhexosaminidase activity	2.19E-05
4	GO:0000989: transcription factor activity, transcription factor binding	3.07E-04
5	GO:0008131: primary amine oxidase activity	5.39E-04
6	GO:0035251: UDP-glucosyltransferase activity	7.53E-04
7	GO:0003756: protein disulfide isomerase activity	8.91E-04
8	GO:0008234: cysteine-type peptidase activity	3.26E-03
9	GO:0008026: ATP-dependent helicase activity	4.02E-03
10	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.62E-03
11	GO:0008168: methyltransferase activity	7.40E-03
12	GO:0042803: protein homodimerization activity	1.03E-02
13	GO:0004519: endonuclease activity	1.23E-02
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.12E-02
15	GO:0030246: carbohydrate binding	2.15E-02
16	GO:0005516: calmodulin binding	2.33E-02
17	GO:0005509: calcium ion binding	2.72E-02
18	GO:0016491: oxidoreductase activity	3.51E-02

Rank	GO Term	Adjusted P value
1	GO:0000419: DNA-directed RNA polymerase V complex	6.22E-04
2	GO:0005643: nuclear pore	1.79E-03
3	GO:0005654: nucleoplasm	4.42E-03
4	GO:0005743: mitochondrial inner membrane	1.10E-02
5	GO:0043231: intracellular membrane-bounded organelle	1.24E-02
6	GO:0009536: plastid	3.33E-02
7	GO:0009505: plant-type cell wall	3.39E-02