co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G15970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0009667: plastid inner membrane organization	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0010025: wax biosynthetic process	1.21E-11
7	GO:0009409: response to cold	8.85E-10
8	GO:0042335: cuticle development	1.30E-08
9	GO:0010143: cutin biosynthetic process	3.64E-08
10	GO:0006633: fatty acid biosynthetic process	1.80E-07
11	GO:0009631: cold acclimation	4.44E-07
12	GO:0000038: very long-chain fatty acid metabolic process	8.54E-07
13	GO:0070417: cellular response to cold	1.49E-05
14	GO:0042761: very long-chain fatty acid biosynthetic process	2.37E-05
15	GO:0000302: response to reactive oxygen species	3.18E-05
16	GO:0005983: starch catabolic process	4.93E-05
17	GO:0035435: phosphate ion transmembrane transport	1.45E-04
18	GO:0071555: cell wall organization	1.52E-04
19	GO:0045926: negative regulation of growth	1.97E-04
20	GO:0006631: fatty acid metabolic process	2.21E-04
21	GO:0050829: defense response to Gram-negative bacterium	2.57E-04
22	GO:0009610: response to symbiotic fungus	2.57E-04
23	GO:0015812: gamma-aminobutyric acid transport	3.14E-04
24	GO:0042759: long-chain fatty acid biosynthetic process	3.14E-04
25	GO:0080051: cutin transport	3.14E-04
26	GO:0033481: galacturonate biosynthetic process	3.14E-04
27	GO:0009609: response to symbiotic bacterium	3.14E-04
28	GO:0008610: lipid biosynthetic process	3.24E-04
29	GO:0009819: drought recovery	3.24E-04
30	GO:0009416: response to light stimulus	3.90E-04
31	GO:1901959: positive regulation of cutin biosynthetic process	6.87E-04
32	GO:0010353: response to trehalose	6.87E-04
33	GO:0015709: thiosulfate transport	6.87E-04
34	GO:0071422: succinate transmembrane transport	6.87E-04
35	GO:0031407: oxylipin metabolic process	6.87E-04
36	GO:0010289: homogalacturonan biosynthetic process	6.87E-04
37	GO:0010115: regulation of abscisic acid biosynthetic process	6.87E-04
38	GO:0015908: fatty acid transport	6.87E-04
39	GO:1901679: nucleotide transmembrane transport	6.87E-04
40	GO:0030148: sphingolipid biosynthetic process	7.62E-04
41	GO:0009062: fatty acid catabolic process	1.11E-03
42	GO:0080121: AMP transport	1.11E-03
43	GO:1904278: positive regulation of wax biosynthetic process	1.11E-03
44	GO:0006081: cellular aldehyde metabolic process	1.11E-03
45	GO:0009737: response to abscisic acid	1.21E-03
46	GO:0009735: response to cytokinin	1.23E-03
47	GO:0009637: response to blue light	1.28E-03
48	GO:0009611: response to wounding	1.54E-03
49	GO:1901332: negative regulation of lateral root development	1.60E-03
50	GO:0051259: protein oligomerization	1.60E-03
51	GO:0006624: vacuolar protein processing	1.60E-03
52	GO:1901000: regulation of response to salt stress	1.60E-03
53	GO:0015729: oxaloacetate transport	1.60E-03
54	GO:0030100: regulation of endocytosis	1.60E-03
55	GO:0010150: leaf senescence	1.61E-03
56	GO:0007623: circadian rhythm	1.61E-03
57	GO:0009414: response to water deprivation	1.76E-03
58	GO:0015867: ATP transport	2.14E-03
59	GO:0010037: response to carbon dioxide	2.14E-03
60	GO:0010222: stem vascular tissue pattern formation	2.14E-03
61	GO:0015976: carbon utilization	2.14E-03
62	GO:0046345: abscisic acid catabolic process	2.14E-03
63	GO:0045727: positive regulation of translation	2.14E-03
64	GO:0071585: detoxification of cadmium ion	2.14E-03
65	GO:0022622: root system development	2.14E-03
66	GO:2000122: negative regulation of stomatal complex development	2.14E-03
67	GO:0045723: positive regulation of fatty acid biosynthetic process	2.14E-03
68	GO:0006552: leucine catabolic process	2.14E-03
69	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.20E-03
70	GO:0009809: lignin biosynthetic process	2.57E-03
71	GO:0071423: malate transmembrane transport	2.74E-03
72	GO:0006461: protein complex assembly	2.74E-03
73	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.74E-03
74	GO:0009697: salicylic acid biosynthetic process	2.74E-03
75	GO:0048868: pollen tube development	3.01E-03
76	GO:0006574: valine catabolic process	3.38E-03
77	GO:0015866: ADP transport	3.38E-03
78	GO:0009913: epidermal cell differentiation	3.38E-03
79	GO:0045962: positive regulation of development, heterochronic	3.38E-03
80	GO:1900425: negative regulation of defense response to bacterium	3.38E-03
81	GO:0006970: response to osmotic stress	3.52E-03
82	GO:0009651: response to salt stress	3.90E-03
83	GO:0098655: cation transmembrane transport	4.06E-03
84	GO:0010555: response to mannitol	4.06E-03
85	GO:0071470: cellular response to osmotic stress	4.06E-03
86	GO:0042372: phylloquinone biosynthetic process	4.06E-03
87	GO:0009082: branched-chain amino acid biosynthetic process	4.06E-03
88	GO:0080167: response to karrikin	4.37E-03
89	GO:0009828: plant-type cell wall loosening	4.50E-03
90	GO:0006904: vesicle docking involved in exocytosis	4.79E-03
91	GO:0008272: sulfate transport	4.80E-03
92	GO:1902074: response to salt	4.80E-03
93	GO:0032880: regulation of protein localization	4.80E-03
94	GO:0030497: fatty acid elongation	4.80E-03
95	GO:0009911: positive regulation of flower development	5.37E-03
96	GO:0042255: ribosome assembly	5.57E-03
97	GO:0009415: response to water	5.57E-03
98	GO:0006353: DNA-templated transcription, termination	5.57E-03
99	GO:2000070: regulation of response to water deprivation	5.57E-03
100	GO:0050821: protein stabilization	5.57E-03
101	GO:0007155: cell adhesion	5.57E-03
102	GO:0032544: plastid translation	6.39E-03
103	GO:0010099: regulation of photomorphogenesis	6.39E-03
104	GO:0009827: plant-type cell wall modification	6.39E-03
105	GO:0030244: cellulose biosynthetic process	7.02E-03
106	GO:0009817: defense response to fungus, incompatible interaction	7.02E-03
107	GO:0010345: suberin biosynthetic process	7.24E-03
108	GO:0098656: anion transmembrane transport	7.24E-03
109	GO:0006098: pentose-phosphate shunt	7.24E-03
110	GO:0048767: root hair elongation	7.37E-03
111	GO:0016042: lipid catabolic process	7.56E-03
112	GO:0050832: defense response to fungus	7.56E-03
113	GO:2000280: regulation of root development	8.14E-03
114	GO:0009641: shade avoidance	9.07E-03
115	GO:0006949: syncytium formation	9.07E-03
116	GO:0010468: regulation of gene expression	1.01E-02
117	GO:0006839: mitochondrial transport	1.02E-02
118	GO:0042542: response to hydrogen peroxide	1.10E-02
119	GO:0045037: protein import into chloroplast stroma	1.11E-02
120	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.11E-02
121	GO:0016024: CDP-diacylglycerol biosynthetic process	1.11E-02
122	GO:0009744: response to sucrose	1.15E-02
123	GO:0009873: ethylene-activated signaling pathway	1.16E-02
124	GO:0050826: response to freezing	1.21E-02
125	GO:0018107: peptidyl-threonine phosphorylation	1.21E-02
126	GO:0009718: anthocyanin-containing compound biosynthetic process	1.21E-02
127	GO:0009725: response to hormone	1.21E-02
128	GO:0010588: cotyledon vascular tissue pattern formation	1.21E-02
129	GO:2000012: regulation of auxin polar transport	1.21E-02
130	GO:0009644: response to high light intensity	1.25E-02
131	GO:0009887: animal organ morphogenesis	1.32E-02
132	GO:0010540: basipetal auxin transport	1.32E-02
133	GO:0048440: carpel development	1.32E-02
134	GO:0009826: unidimensional cell growth	1.34E-02
135	GO:0009225: nucleotide-sugar metabolic process	1.43E-02
136	GO:0009664: plant-type cell wall organization	1.45E-02
137	GO:0042538: hyperosmotic salinity response	1.45E-02
138	GO:0009833: plant-type primary cell wall biogenesis	1.54E-02
139	GO:0051603: proteolysis involved in cellular protein catabolic process	1.61E-02
140	GO:0030150: protein import into mitochondrial matrix	1.66E-02
141	GO:0006289: nucleotide-excision repair	1.66E-02
142	GO:0007017: microtubule-based process	1.78E-02
143	GO:0043086: negative regulation of catalytic activity	1.84E-02
144	GO:0048367: shoot system development	1.90E-02
145	GO:0003333: amino acid transmembrane transport	1.91E-02
146	GO:0016998: cell wall macromolecule catabolic process	1.91E-02
147	GO:0051260: protein homooligomerization	1.91E-02
148	GO:0009269: response to desiccation	1.91E-02
149	GO:0031408: oxylipin biosynthetic process	1.91E-02
150	GO:0030245: cellulose catabolic process	2.03E-02
151	GO:0010017: red or far-red light signaling pathway	2.03E-02
152	GO:0042545: cell wall modification	2.15E-02
153	GO:0001944: vasculature development	2.16E-02
154	GO:0019722: calcium-mediated signaling	2.29E-02
155	GO:0006284: base-excision repair	2.29E-02
156	GO:0008284: positive regulation of cell proliferation	2.43E-02
157	GO:0048653: anther development	2.57E-02
158	GO:0042631: cellular response to water deprivation	2.57E-02
159	GO:0000226: microtubule cytoskeleton organization	2.57E-02
160	GO:0006869: lipid transport	2.61E-02
161	GO:0055085: transmembrane transport	2.67E-02
162	GO:0010268: brassinosteroid homeostasis	2.71E-02
163	GO:0009958: positive gravitropism	2.71E-02
164	GO:0045489: pectin biosynthetic process	2.71E-02
165	GO:0015986: ATP synthesis coupled proton transport	2.85E-02
166	GO:0042752: regulation of circadian rhythm	2.85E-02
167	GO:0009058: biosynthetic process	2.93E-02
168	GO:0019252: starch biosynthetic process	3.00E-02
169	GO:0008654: phospholipid biosynthetic process	3.00E-02
170	GO:0010183: pollen tube guidance	3.00E-02
171	GO:0009749: response to glucose	3.00E-02
172	GO:0006635: fatty acid beta-oxidation	3.15E-02
173	GO:0016132: brassinosteroid biosynthetic process	3.15E-02
174	GO:0071554: cell wall organization or biogenesis	3.15E-02
175	GO:0032502: developmental process	3.30E-02
176	GO:0010583: response to cyclopentenone	3.30E-02
177	GO:0010090: trichome morphogenesis	3.45E-02
178	GO:0006310: DNA recombination	3.61E-02
179	GO:0016125: sterol metabolic process	3.61E-02
180	GO:0019760: glucosinolate metabolic process	3.61E-02
181	GO:0009639: response to red or far red light	3.61E-02
182	GO:0010252: auxin homeostasis	3.61E-02
183	GO:0005975: carbohydrate metabolic process	3.67E-02
184	GO:0007267: cell-cell signaling	3.77E-02
185	GO:0010286: heat acclimation	3.77E-02
186	GO:0045490: pectin catabolic process	3.83E-02
187	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.25E-02
188	GO:0009739: response to gibberellin	4.28E-02
189	GO:0055114: oxidation-reduction process	4.34E-02
190	GO:0006470: protein dephosphorylation	4.37E-02
191	GO:0006974: cellular response to DNA damage stimulus	4.42E-02
192	GO:0010411: xyloglucan metabolic process	4.59E-02
193	GO:0015995: chlorophyll biosynthetic process	4.59E-02
194	GO:0018298: protein-chromophore linkage	4.93E-02
195	GO:0048481: plant ovule development	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0051060: pullulanase activity	0.00E+00
2	GO:0010303: limit dextrinase activity	0.00E+00
3	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
4	GO:0005534: galactose binding	0.00E+00
5	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.21E-11
6	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.21E-11
7	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.21E-11
8	GO:0009922: fatty acid elongase activity	4.75E-09
9	GO:0052747: sinapyl alcohol dehydrogenase activity	8.86E-06
10	GO:0070330: aromatase activity	1.59E-05
11	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.93E-05
12	GO:0018685: alkane 1-monooxygenase activity	1.00E-04
13	GO:0016746: transferase activity, transferring acyl groups	1.09E-04
14	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.45E-04
15	GO:0004556: alpha-amylase activity	1.45E-04
16	GO:0008909: isochorismate synthase activity	3.14E-04
17	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	3.14E-04
18	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.14E-04
19	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	3.14E-04
20	GO:0015245: fatty acid transporter activity	3.14E-04
21	GO:0008809: carnitine racemase activity	3.14E-04
22	GO:0050521: alpha-glucan, water dikinase activity	3.14E-04
23	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	3.14E-04
24	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.59E-04
25	GO:0015117: thiosulfate transmembrane transporter activity	6.87E-04
26	GO:1901677: phosphate transmembrane transporter activity	6.87E-04
27	GO:0015180: L-alanine transmembrane transporter activity	6.87E-04
28	GO:0016629: 12-oxophytodienoate reductase activity	6.87E-04
29	GO:0001047: core promoter binding	6.87E-04
30	GO:0015141: succinate transmembrane transporter activity	1.11E-03
31	GO:0017108: 5'-flap endonuclease activity	1.11E-03
32	GO:0008266: poly(U) RNA binding	1.11E-03
33	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.11E-03
34	GO:0004324: ferredoxin-NADP+ reductase activity	1.11E-03
35	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.11E-03
36	GO:0050734: hydroxycinnamoyltransferase activity	1.11E-03
37	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.11E-03
38	GO:0003883: CTP synthase activity	1.60E-03
39	GO:0052656: L-isoleucine transaminase activity	1.60E-03
40	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.60E-03
41	GO:0052654: L-leucine transaminase activity	1.60E-03
42	GO:0052655: L-valine transaminase activity	1.60E-03
43	GO:0015189: L-lysine transmembrane transporter activity	1.60E-03
44	GO:0015131: oxaloacetate transmembrane transporter activity	1.60E-03
45	GO:0015181: arginine transmembrane transporter activity	1.60E-03
46	GO:0050378: UDP-glucuronate 4-epimerase activity	2.14E-03
47	GO:0019104: DNA N-glycosylase activity	2.14E-03
48	GO:0005313: L-glutamate transmembrane transporter activity	2.14E-03
49	GO:0004084: branched-chain-amino-acid transaminase activity	2.14E-03
50	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.33E-03
51	GO:0080122: AMP transmembrane transporter activity	2.74E-03
52	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.74E-03
53	GO:0003959: NADPH dehydrogenase activity	2.74E-03
54	GO:0016788: hydrolase activity, acting on ester bonds	3.24E-03
55	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.38E-03
56	GO:0004130: cytochrome-c peroxidase activity	3.38E-03
57	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.38E-03
58	GO:0004602: glutathione peroxidase activity	4.06E-03
59	GO:0005347: ATP transmembrane transporter activity	4.06E-03
60	GO:0015217: ADP transmembrane transporter activity	4.06E-03
61	GO:0102391: decanoate--CoA ligase activity	4.06E-03
62	GO:0016791: phosphatase activity	4.50E-03
63	GO:0004620: phospholipase activity	4.80E-03
64	GO:0004467: long-chain fatty acid-CoA ligase activity	4.80E-03
65	GO:0009881: photoreceptor activity	4.80E-03
66	GO:0015140: malate transmembrane transporter activity	4.80E-03
67	GO:0016413: O-acetyltransferase activity	5.07E-03
68	GO:0052689: carboxylic ester hydrolase activity	5.08E-03
69	GO:0015288: porin activity	5.57E-03
70	GO:0016209: antioxidant activity	5.57E-03
71	GO:0015078: hydrogen ion transmembrane transporter activity	6.39E-03
72	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.67E-03
73	GO:0000989: transcription factor activity, transcription factor binding	7.24E-03
74	GO:0046910: pectinesterase inhibitor activity	7.40E-03
75	GO:0016740: transferase activity	7.60E-03
76	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.14E-03
77	GO:0009672: auxin:proton symporter activity	8.14E-03
78	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.71E-03
79	GO:0004864: protein phosphatase inhibitor activity	9.07E-03
80	GO:0003680: AT DNA binding	1.00E-02
81	GO:0015116: sulfate transmembrane transporter activity	1.11E-02
82	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.11E-02
83	GO:0043565: sequence-specific DNA binding	1.13E-02
84	GO:0010329: auxin efflux transmembrane transporter activity	1.21E-02
85	GO:0015266: protein channel activity	1.21E-02
86	GO:0004089: carbonate dehydratase activity	1.21E-02
87	GO:0015114: phosphate ion transmembrane transporter activity	1.21E-02
88	GO:0008289: lipid binding	1.30E-02
89	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.32E-02
90	GO:0008083: growth factor activity	1.32E-02
91	GO:0045330: aspartyl esterase activity	1.72E-02
92	GO:0015171: amino acid transmembrane transporter activity	1.72E-02
93	GO:0004707: MAP kinase activity	1.91E-02
94	GO:0030599: pectinesterase activity	2.09E-02
95	GO:0016760: cellulose synthase (UDP-forming) activity	2.16E-02
96	GO:0008810: cellulase activity	2.16E-02
97	GO:0003727: single-stranded RNA binding	2.29E-02
98	GO:0019843: rRNA binding	2.78E-02
99	GO:0010181: FMN binding	2.85E-02
100	GO:0050662: coenzyme binding	2.85E-02
101	GO:0004872: receptor activity	3.00E-02
102	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.15E-02
103	GO:0004197: cysteine-type endopeptidase activity	3.30E-02
104	GO:0004518: nuclease activity	3.30E-02
105	GO:0016759: cellulose synthase activity	3.61E-02
106	GO:0003684: damaged DNA binding	3.61E-02
107	GO:0015297: antiporter activity	3.66E-02
108	GO:0005200: structural constituent of cytoskeleton	3.77E-02
109	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.59E-02
110	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	4.48E-06
4	GO:0009941: chloroplast envelope	6.20E-05
5	GO:0046658: anchored component of plasma membrane	8.52E-05
6	GO:0005783: endoplasmic reticulum	1.13E-04
7	GO:0016020: membrane	7.47E-04
8	GO:0005618: cell wall	8.95E-04
9	GO:0009505: plant-type cell wall	9.78E-04
10	GO:0031225: anchored component of membrane	1.05E-03
11	GO:0009897: external side of plasma membrane	1.11E-03
12	GO:0009535: chloroplast thylakoid membrane	1.38E-03
13	GO:0009579: thylakoid	2.10E-03
14	GO:0009527: plastid outer membrane	2.14E-03
15	GO:0009534: chloroplast thylakoid	2.14E-03
16	GO:0005798: Golgi-associated vesicle	3.38E-03
17	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	3.38E-03
18	GO:0009570: chloroplast stroma	3.90E-03
19	GO:0000145: exocyst	3.97E-03
20	GO:0005789: endoplasmic reticulum membrane	4.69E-03
21	GO:0048046: apoplast	4.79E-03
22	GO:0010287: plastoglobule	5.01E-03
23	GO:0031305: integral component of mitochondrial inner membrane	5.57E-03
24	GO:0046930: pore complex	6.39E-03
25	GO:0045298: tubulin complex	7.24E-03
26	GO:0005615: extracellular space	9.33E-03
27	GO:0005576: extracellular region	1.14E-02
28	GO:0009508: plastid chromosome	1.21E-02
29	GO:0005802: trans-Golgi network	1.22E-02
30	GO:0005768: endosome	1.52E-02
31	GO:0005769: early endosome	1.54E-02
32	GO:0016021: integral component of membrane	1.57E-02
33	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.29E-02
34	GO:0005654: nucleoplasm	2.70E-02
35	GO:0071944: cell periphery	3.45E-02
36	GO:0032580: Golgi cisterna membrane	3.61E-02
37	GO:0010319: stromule	3.77E-02
38	GO:0009295: nucleoid	3.77E-02
39	GO:0005886: plasma membrane	4.22E-02
40	GO:0005788: endoplasmic reticulum lumen	4.25E-02
41	GO:0005622: intracellular	4.36E-02
42	GO:0009707: chloroplast outer membrane	4.93E-02