co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G15490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:2001143: N-methylnicotinate transport	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
5	GO:2001142: nicotinate transport	0.00E+00
6	GO:0009737: response to abscisic acid	2.63E-06
7	GO:0010200: response to chitin	2.62E-05
8	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.89E-05
9	GO:0007229: integrin-mediated signaling pathway	8.43E-05
10	GO:0032491: detection of molecule of fungal origin	8.43E-05
11	GO:1900384: regulation of flavonol biosynthetic process	8.43E-05
12	GO:0010726: positive regulation of hydrogen peroxide metabolic process	8.43E-05
13	GO:0007163: establishment or maintenance of cell polarity	2.00E-04
14	GO:0010372: positive regulation of gibberellin biosynthetic process	2.00E-04
15	GO:0006468: protein phosphorylation	2.42E-04
16	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.35E-04
17	GO:0080168: abscisic acid transport	3.35E-04
18	GO:0001578: microtubule bundle formation	3.35E-04
19	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	3.35E-04
20	GO:0010447: response to acidic pH	3.35E-04
21	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	3.35E-04
22	GO:0009686: gibberellin biosynthetic process	3.73E-04
23	GO:0033014: tetrapyrrole biosynthetic process	4.84E-04
24	GO:0071323: cellular response to chitin	4.84E-04
25	GO:0006986: response to unfolded protein	4.84E-04
26	GO:0009399: nitrogen fixation	4.84E-04
27	GO:0009749: response to glucose	5.85E-04
28	GO:0071219: cellular response to molecule of bacterial origin	6.44E-04
29	GO:0015743: malate transport	6.44E-04
30	GO:0009652: thigmotropism	6.44E-04
31	GO:0045727: positive regulation of translation	6.44E-04
32	GO:0045487: gibberellin catabolic process	8.14E-04
33	GO:0006090: pyruvate metabolic process	8.14E-04
34	GO:0030041: actin filament polymerization	8.14E-04
35	GO:0010337: regulation of salicylic acid metabolic process	9.94E-04
36	GO:0006014: D-ribose metabolic process	9.94E-04
37	GO:0010942: positive regulation of cell death	9.94E-04
38	GO:0048317: seed morphogenesis	9.94E-04
39	GO:0010555: response to mannitol	1.18E-03
40	GO:2000067: regulation of root morphogenesis	1.18E-03
41	GO:0035556: intracellular signal transduction	1.23E-03
42	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.39E-03
43	GO:1900057: positive regulation of leaf senescence	1.39E-03
44	GO:0010044: response to aluminum ion	1.39E-03
45	GO:0006955: immune response	1.39E-03
46	GO:0006402: mRNA catabolic process	1.60E-03
47	GO:2000070: regulation of response to water deprivation	1.60E-03
48	GO:0045010: actin nucleation	1.60E-03
49	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.60E-03
50	GO:0030968: endoplasmic reticulum unfolded protein response	1.83E-03
51	GO:0007186: G-protein coupled receptor signaling pathway	1.83E-03
52	GO:0006783: heme biosynthetic process	2.06E-03
53	GO:0009835: fruit ripening	2.06E-03
54	GO:2000280: regulation of root development	2.30E-03
55	GO:0008202: steroid metabolic process	2.30E-03
56	GO:0006779: porphyrin-containing compound biosynthetic process	2.30E-03
57	GO:0009086: methionine biosynthetic process	2.30E-03
58	GO:0048829: root cap development	2.56E-03
59	GO:0006782: protoporphyrinogen IX biosynthetic process	2.56E-03
60	GO:0009750: response to fructose	2.82E-03
61	GO:0010015: root morphogenesis	2.82E-03
62	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.09E-03
63	GO:0006108: malate metabolic process	3.37E-03
64	GO:0034605: cellular response to heat	3.66E-03
65	GO:0046854: phosphatidylinositol phosphorylation	3.95E-03
66	GO:0009825: multidimensional cell growth	3.95E-03
67	GO:0009873: ethylene-activated signaling pathway	4.01E-03
68	GO:0051260: protein homooligomerization	5.22E-03
69	GO:0030433: ubiquitin-dependent ERAD pathway	5.55E-03
70	GO:0009738: abscisic acid-activated signaling pathway	5.76E-03
71	GO:0009651: response to salt stress	5.89E-03
72	GO:0009693: ethylene biosynthetic process	5.89E-03
73	GO:0071215: cellular response to abscisic acid stimulus	5.89E-03
74	GO:0009611: response to wounding	6.17E-03
75	GO:0010091: trichome branching	6.24E-03
76	GO:0009306: protein secretion	6.24E-03
77	GO:0006470: protein dephosphorylation	6.87E-03
78	GO:0042631: cellular response to water deprivation	6.97E-03
79	GO:0000226: microtubule cytoskeleton organization	6.97E-03
80	GO:0009617: response to bacterium	7.18E-03
81	GO:0009960: endosperm development	7.34E-03
82	GO:0048544: recognition of pollen	7.72E-03
83	GO:0019252: starch biosynthetic process	8.10E-03
84	GO:0002229: defense response to oomycetes	8.50E-03
85	GO:0031047: gene silencing by RNA	8.90E-03
86	GO:0009630: gravitropism	8.90E-03
87	GO:0009639: response to red or far red light	9.72E-03
88	GO:0006914: autophagy	9.72E-03
89	GO:0006970: response to osmotic stress	1.00E-02
90	GO:0010286: heat acclimation	1.01E-02
91	GO:0071805: potassium ion transmembrane transport	1.01E-02
92	GO:0016579: protein deubiquitination	1.06E-02
93	GO:0009723: response to ethylene	1.08E-02
94	GO:0009816: defense response to bacterium, incompatible interaction	1.14E-02
95	GO:0048573: photoperiodism, flowering	1.23E-02
96	GO:0015995: chlorophyll biosynthetic process	1.23E-02
97	GO:0046777: protein autophosphorylation	1.24E-02
98	GO:0016310: phosphorylation	1.28E-02
99	GO:0008219: cell death	1.33E-02
100	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
101	GO:0010311: lateral root formation	1.37E-02
102	GO:0010119: regulation of stomatal movement	1.47E-02
103	GO:0006979: response to oxidative stress	1.49E-02
104	GO:0045087: innate immune response	1.57E-02
105	GO:0016051: carbohydrate biosynthetic process	1.57E-02
106	GO:0009751: response to salicylic acid	1.69E-02
107	GO:0009408: response to heat	1.71E-02
108	GO:0006397: mRNA processing	1.78E-02
109	GO:0048364: root development	1.78E-02
110	GO:0009744: response to sucrose	1.88E-02
111	GO:0051707: response to other organism	1.88E-02
112	GO:0006855: drug transmembrane transport	2.10E-02
113	GO:0009409: response to cold	2.16E-02
114	GO:0006813: potassium ion transport	2.32E-02
115	GO:0046686: response to cadmium ion	2.57E-02
116	GO:0009626: plant-type hypersensitive response	2.74E-02
117	GO:0042545: cell wall modification	2.92E-02
118	GO:0009742: brassinosteroid mediated signaling pathway	3.11E-02
119	GO:0000398: mRNA splicing, via spliceosome	3.30E-02
120	GO:0045893: positive regulation of transcription, DNA-templated	3.48E-02
121	GO:0009845: seed germination	3.70E-02
122	GO:0006633: fatty acid biosynthetic process	4.12E-02
123	GO:0045490: pectin catabolic process	4.40E-02
124	GO:0006355: regulation of transcription, DNA-templated	4.82E-02
125	GO:0007166: cell surface receptor signaling pathway	4.84E-02
126	GO:0008380: RNA splicing	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0090416: nicotinate transporter activity	0.00E+00
4	GO:0016301: kinase activity	1.19E-05
5	GO:0090440: abscisic acid transporter activity	8.43E-05
6	GO:0047150: betaine-homocysteine S-methyltransferase activity	8.43E-05
7	GO:0004103: choline kinase activity	2.00E-04
8	GO:0008883: glutamyl-tRNA reductase activity	2.00E-04
9	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	2.00E-04
10	GO:0004674: protein serine/threonine kinase activity	2.74E-04
11	GO:0004672: protein kinase activity	3.10E-04
12	GO:0031683: G-protein beta/gamma-subunit complex binding	3.35E-04
13	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	3.35E-04
14	GO:0001664: G-protein coupled receptor binding	3.35E-04
15	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	4.84E-04
16	GO:0004470: malic enzyme activity	6.44E-04
17	GO:0005253: anion channel activity	6.44E-04
18	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	6.44E-04
19	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	6.44E-04
20	GO:0043015: gamma-tubulin binding	6.44E-04
21	GO:0019199: transmembrane receptor protein kinase activity	6.44E-04
22	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.98E-04
23	GO:0004356: glutamate-ammonia ligase activity	8.14E-04
24	GO:0008948: oxaloacetate decarboxylase activity	8.14E-04
25	GO:0005524: ATP binding	9.60E-04
26	GO:0004747: ribokinase activity	1.18E-03
27	GO:0004143: diacylglycerol kinase activity	1.39E-03
28	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.39E-03
29	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.39E-03
30	GO:0015140: malate transmembrane transporter activity	1.39E-03
31	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.57E-03
32	GO:0008865: fructokinase activity	1.60E-03
33	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.60E-03
34	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.60E-03
35	GO:0004430: 1-phosphatidylinositol 4-kinase activity	1.83E-03
36	GO:0003951: NAD+ kinase activity	1.83E-03
37	GO:0008142: oxysterol binding	1.83E-03
38	GO:0004521: endoribonuclease activity	3.09E-03
39	GO:0019888: protein phosphatase regulator activity	3.37E-03
40	GO:0008061: chitin binding	3.95E-03
41	GO:0015079: potassium ion transmembrane transporter activity	4.89E-03
42	GO:0035251: UDP-glucosyltransferase activity	5.22E-03
43	GO:0004540: ribonuclease activity	5.22E-03
44	GO:0022891: substrate-specific transmembrane transporter activity	5.89E-03
45	GO:0019901: protein kinase binding	8.10E-03
46	GO:0003676: nucleic acid binding	8.41E-03
47	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.50E-03
48	GO:0004518: nuclease activity	8.90E-03
49	GO:0008375: acetylglucosaminyltransferase activity	1.19E-02
50	GO:0030247: polysaccharide binding	1.23E-02
51	GO:0004721: phosphoprotein phosphatase activity	1.23E-02
52	GO:0015238: drug transmembrane transporter activity	1.37E-02
53	GO:0004871: signal transducer activity	1.45E-02
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.47E-02
55	GO:0004722: protein serine/threonine phosphatase activity	1.52E-02
56	GO:0003924: GTPase activity	1.71E-02
57	GO:0050661: NADP binding	1.72E-02
58	GO:0043621: protein self-association	1.99E-02
59	GO:0035091: phosphatidylinositol binding	1.99E-02
60	GO:0051287: NAD binding	2.15E-02
61	GO:0004842: ubiquitin-protein transferase activity	2.21E-02
62	GO:0045330: aspartyl esterase activity	2.50E-02
63	GO:0031625: ubiquitin protein ligase binding	2.50E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.80E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.80E-02
66	GO:0030599: pectinesterase activity	2.86E-02
67	GO:0022857: transmembrane transporter activity	2.86E-02
68	GO:0003779: actin binding	2.92E-02
69	GO:0046872: metal ion binding	3.12E-02
70	GO:0016758: transferase activity, transferring hexosyl groups	3.44E-02
71	GO:0030170: pyridoxal phosphate binding	3.77E-02
72	GO:0015144: carbohydrate transmembrane transporter activity	3.98E-02
73	GO:0030246: carbohydrate binding	4.07E-02
74	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.19E-02
75	GO:0015297: antiporter activity	4.26E-02
76	GO:0005351: sugar:proton symporter activity	4.33E-02
77	GO:0008017: microtubule binding	4.55E-02
78	GO:0008194: UDP-glycosyltransferase activity	4.77E-02
79	GO:0005525: GTP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	8.43E-05
2	GO:0008287: protein serine/threonine phosphatase complex	3.35E-04
3	GO:0010494: cytoplasmic stress granule	2.06E-03
4	GO:0055028: cortical microtubule	2.56E-03
5	GO:0090404: pollen tube tip	2.82E-03
6	GO:0071013: catalytic step 2 spliceosome	2.82E-03
7	GO:0048471: perinuclear region of cytoplasm	2.82E-03
8	GO:0000159: protein phosphatase type 2A complex	2.82E-03
9	GO:0030136: clathrin-coated vesicle	6.60E-03
10	GO:0005737: cytoplasm	7.21E-03
11	GO:0005770: late endosome	7.34E-03
12	GO:0005886: plasma membrane	9.42E-03
13	GO:0000932: P-body	1.10E-02
14	GO:0019005: SCF ubiquitin ligase complex	1.33E-02
15	GO:0031902: late endosome membrane	1.77E-02
16	GO:0009505: plant-type cell wall	1.96E-02
17	GO:0005635: nuclear envelope	2.44E-02
18	GO:0005834: heterotrimeric G-protein complex	2.74E-02
19	GO:0009524: phragmoplast	3.64E-02
20	GO:0005829: cytosol	4.18E-02
21	GO:0009705: plant-type vacuole membrane	4.40E-02
22	GO:0031225: anchored component of membrane	4.71E-02