GO Enrichment Analysis of Co-expressed Genes with
AT2G15430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008612: peptidyl-lysine modification to peptidyl-hypusine | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 7 | GO:0006364: rRNA processing | 5.82E-08 |
| 8 | GO:0042273: ribosomal large subunit biogenesis | 2.51E-06 |
| 9 | GO:0009553: embryo sac development | 5.83E-06 |
| 10 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 4.74E-05 |
| 11 | GO:2000232: regulation of rRNA processing | 4.74E-05 |
| 12 | GO:0043985: histone H4-R3 methylation | 4.74E-05 |
| 13 | GO:0034470: ncRNA processing | 1.17E-04 |
| 14 | GO:0045039: protein import into mitochondrial inner membrane | 2.00E-04 |
| 15 | GO:0007276: gamete generation | 2.94E-04 |
| 16 | GO:0009855: determination of bilateral symmetry | 2.94E-04 |
| 17 | GO:0000460: maturation of 5.8S rRNA | 3.94E-04 |
| 18 | GO:0000380: alternative mRNA splicing, via spliceosome | 5.00E-04 |
| 19 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 5.00E-04 |
| 20 | GO:0042254: ribosome biogenesis | 5.43E-04 |
| 21 | GO:0000470: maturation of LSU-rRNA | 6.13E-04 |
| 22 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.31E-04 |
| 23 | GO:0080186: developmental vegetative growth | 8.54E-04 |
| 24 | GO:0000387: spliceosomal snRNP assembly | 1.40E-03 |
| 25 | GO:0010162: seed dormancy process | 1.55E-03 |
| 26 | GO:0006913: nucleocytoplasmic transport | 1.70E-03 |
| 27 | GO:0006879: cellular iron ion homeostasis | 1.70E-03 |
| 28 | GO:0006626: protein targeting to mitochondrion | 2.03E-03 |
| 29 | GO:0010030: positive regulation of seed germination | 2.38E-03 |
| 30 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.74E-03 |
| 31 | GO:0051302: regulation of cell division | 2.93E-03 |
| 32 | GO:0016226: iron-sulfur cluster assembly | 3.32E-03 |
| 33 | GO:0007005: mitochondrion organization | 3.32E-03 |
| 34 | GO:0009294: DNA mediated transformation | 3.52E-03 |
| 35 | GO:0006414: translational elongation | 3.80E-03 |
| 36 | GO:0070417: cellular response to cold | 3.93E-03 |
| 37 | GO:0009960: endosperm development | 4.37E-03 |
| 38 | GO:0010197: polar nucleus fusion | 4.37E-03 |
| 39 | GO:0045892: negative regulation of transcription, DNA-templated | 6.59E-03 |
| 40 | GO:0016049: cell growth | 7.54E-03 |
| 41 | GO:0032259: methylation | 7.65E-03 |
| 42 | GO:0048527: lateral root development | 8.65E-03 |
| 43 | GO:0000154: rRNA modification | 1.20E-02 |
| 44 | GO:0006412: translation | 1.26E-02 |
| 45 | GO:0016569: covalent chromatin modification | 1.67E-02 |
| 46 | GO:0006396: RNA processing | 1.78E-02 |
| 47 | GO:0009742: brassinosteroid mediated signaling pathway | 1.82E-02 |
| 48 | GO:0000398: mRNA splicing, via spliceosome | 1.93E-02 |
| 49 | GO:0009790: embryo development | 2.29E-02 |
| 50 | GO:0006413: translational initiation | 2.45E-02 |
| 51 | GO:0009651: response to salt stress | 2.59E-02 |
| 52 | GO:0009451: RNA modification | 2.62E-02 |
| 53 | GO:0007166: cell surface receptor signaling pathway | 2.83E-02 |
| 54 | GO:0009723: response to ethylene | 3.90E-02 |
| 55 | GO:0046686: response to cadmium ion | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003963: RNA-3'-phosphate cyclase activity | 0.00E+00 |
| 2 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 3 | GO:0034038: deoxyhypusine synthase activity | 0.00E+00 |
| 4 | GO:0000166: nucleotide binding | 4.52E-09 |
| 5 | GO:0003723: RNA binding | 2.16E-08 |
| 6 | GO:0043021: ribonucleoprotein complex binding | 1.38E-07 |
| 7 | GO:0030515: snoRNA binding | 1.32E-05 |
| 8 | GO:0003746: translation elongation factor activity | 3.67E-05 |
| 9 | GO:0042134: rRNA primary transcript binding | 4.74E-05 |
| 10 | GO:0001054: RNA polymerase I activity | 5.03E-05 |
| 11 | GO:0001056: RNA polymerase III activity | 5.92E-05 |
| 12 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.58E-05 |
| 13 | GO:0004407: histone deacetylase activity | 1.14E-04 |
| 14 | GO:0036455: iron-sulfur transferase activity | 1.17E-04 |
| 15 | GO:0070181: small ribosomal subunit rRNA binding | 2.00E-04 |
| 16 | GO:0008198: ferrous iron binding | 5.00E-04 |
| 17 | GO:0001055: RNA polymerase II activity | 1.40E-03 |
| 18 | GO:0045309: protein phosphorylated amino acid binding | 1.40E-03 |
| 19 | GO:0019904: protein domain specific binding | 1.70E-03 |
| 20 | GO:0003735: structural constituent of ribosome | 2.93E-03 |
| 21 | GO:0008168: methyltransferase activity | 4.22E-03 |
| 22 | GO:0003713: transcription coactivator activity | 4.37E-03 |
| 23 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.81E-03 |
| 24 | GO:0003924: GTPase activity | 7.99E-03 |
| 25 | GO:0050897: cobalt ion binding | 8.65E-03 |
| 26 | GO:0003729: mRNA binding | 9.27E-03 |
| 27 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 9.51E-03 |
| 28 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.01E-02 |
| 29 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.16E-02 |
| 30 | GO:0005198: structural molecule activity | 1.20E-02 |
| 31 | GO:0005515: protein binding | 1.30E-02 |
| 32 | GO:0016787: hydrolase activity | 1.47E-02 |
| 33 | GO:0051082: unfolded protein binding | 1.75E-02 |
| 34 | GO:0008026: ATP-dependent helicase activity | 1.82E-02 |
| 35 | GO:0008565: protein transporter activity | 2.33E-02 |
| 36 | GO:0003743: translation initiation factor activity | 2.88E-02 |
| 37 | GO:0003824: catalytic activity | 3.17E-02 |
| 38 | GO:0003676: nucleic acid binding | 3.34E-02 |
| 39 | GO:0008270: zinc ion binding | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070545: PeBoW complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.45E-24 |
| 5 | GO:0032040: small-subunit processome | 3.20E-09 |
| 6 | GO:0030687: preribosome, large subunit precursor | 5.62E-08 |
| 7 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.88E-08 |
| 8 | GO:0005834: heterotrimeric G-protein complex | 4.79E-06 |
| 9 | GO:0005634: nucleus | 8.17E-06 |
| 10 | GO:0005736: DNA-directed RNA polymerase I complex | 2.84E-05 |
| 11 | GO:0005666: DNA-directed RNA polymerase III complex | 3.50E-05 |
| 12 | GO:0005662: DNA replication factor A complex | 4.74E-05 |
| 13 | GO:0005654: nucleoplasm | 1.89E-04 |
| 14 | GO:0005759: mitochondrial matrix | 2.67E-04 |
| 15 | GO:0005618: cell wall | 4.86E-04 |
| 16 | GO:0031428: box C/D snoRNP complex | 6.13E-04 |
| 17 | GO:0000974: Prp19 complex | 6.13E-04 |
| 18 | GO:0016363: nuclear matrix | 7.31E-04 |
| 19 | GO:0022625: cytosolic large ribosomal subunit | 7.39E-04 |
| 20 | GO:0034399: nuclear periphery | 9.81E-04 |
| 21 | GO:0005763: mitochondrial small ribosomal subunit | 1.25E-03 |
| 22 | GO:0015030: Cajal body | 1.40E-03 |
| 23 | GO:0071011: precatalytic spliceosome | 1.40E-03 |
| 24 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.55E-03 |
| 25 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.70E-03 |
| 26 | GO:0071013: catalytic step 2 spliceosome | 1.70E-03 |
| 27 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.86E-03 |
| 28 | GO:0019013: viral nucleocapsid | 2.03E-03 |
| 29 | GO:0000419: DNA-directed RNA polymerase V complex | 2.56E-03 |
| 30 | GO:0005758: mitochondrial intermembrane space | 2.74E-03 |
| 31 | GO:0015935: small ribosomal subunit | 3.12E-03 |
| 32 | GO:0005840: ribosome | 5.94E-03 |
| 33 | GO:0030529: intracellular ribonucleoprotein complex | 6.50E-03 |
| 34 | GO:0005743: mitochondrial inner membrane | 7.43E-03 |
| 35 | GO:0015934: large ribosomal subunit | 8.65E-03 |
| 36 | GO:0005635: nuclear envelope | 1.43E-02 |
| 37 | GO:0005747: mitochondrial respiratory chain complex I | 1.57E-02 |
| 38 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.86E-02 |
| 39 | GO:0005622: intracellular | 2.53E-02 |
| 40 | GO:0005774: vacuolar membrane | 2.70E-02 |
| 41 | GO:0022627: cytosolic small ribosomal subunit | 3.14E-02 |
| 42 | GO:0005773: vacuole | 4.57E-02 |