GO Enrichment Analysis of Co-expressed Genes with
AT2G15290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0010027: thylakoid membrane organization | 1.15E-05 |
| 6 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.04E-05 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 4.04E-05 |
| 8 | GO:1902458: positive regulation of stomatal opening | 4.04E-05 |
| 9 | GO:0015979: photosynthesis | 5.91E-05 |
| 10 | GO:0010207: photosystem II assembly | 6.26E-05 |
| 11 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.00E-04 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.00E-04 |
| 13 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.00E-04 |
| 14 | GO:0090391: granum assembly | 1.73E-04 |
| 15 | GO:0071492: cellular response to UV-A | 1.73E-04 |
| 16 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.55E-04 |
| 17 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.55E-04 |
| 18 | GO:2001141: regulation of RNA biosynthetic process | 2.55E-04 |
| 19 | GO:0006546: glycine catabolic process | 3.43E-04 |
| 20 | GO:0071486: cellular response to high light intensity | 3.43E-04 |
| 21 | GO:0009658: chloroplast organization | 4.07E-04 |
| 22 | GO:0010236: plastoquinone biosynthetic process | 4.37E-04 |
| 23 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.37E-04 |
| 24 | GO:0010189: vitamin E biosynthetic process | 6.40E-04 |
| 25 | GO:0010196: nonphotochemical quenching | 7.49E-04 |
| 26 | GO:0048564: photosystem I assembly | 8.61E-04 |
| 27 | GO:2000070: regulation of response to water deprivation | 8.61E-04 |
| 28 | GO:0000105: histidine biosynthetic process | 8.61E-04 |
| 29 | GO:0009231: riboflavin biosynthetic process | 8.61E-04 |
| 30 | GO:0071482: cellular response to light stimulus | 9.77E-04 |
| 31 | GO:0015996: chlorophyll catabolic process | 9.77E-04 |
| 32 | GO:0007186: G-protein coupled receptor signaling pathway | 9.77E-04 |
| 33 | GO:0009657: plastid organization | 9.77E-04 |
| 34 | GO:0032544: plastid translation | 9.77E-04 |
| 35 | GO:0006415: translational termination | 1.49E-03 |
| 36 | GO:0019684: photosynthesis, light reaction | 1.49E-03 |
| 37 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.49E-03 |
| 38 | GO:0006352: DNA-templated transcription, initiation | 1.49E-03 |
| 39 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.49E-03 |
| 40 | GO:0005983: starch catabolic process | 1.63E-03 |
| 41 | GO:0045037: protein import into chloroplast stroma | 1.63E-03 |
| 42 | GO:0010020: chloroplast fission | 1.92E-03 |
| 43 | GO:0000162: tryptophan biosynthetic process | 2.23E-03 |
| 44 | GO:0061077: chaperone-mediated protein folding | 2.72E-03 |
| 45 | GO:0048278: vesicle docking | 2.72E-03 |
| 46 | GO:0009561: megagametogenesis | 3.24E-03 |
| 47 | GO:0000413: protein peptidyl-prolyl isomerization | 3.61E-03 |
| 48 | GO:0042254: ribosome biogenesis | 3.64E-03 |
| 49 | GO:0010182: sugar mediated signaling pathway | 3.80E-03 |
| 50 | GO:0061025: membrane fusion | 3.99E-03 |
| 51 | GO:0010583: response to cyclopentenone | 4.58E-03 |
| 52 | GO:0006906: vesicle fusion | 6.09E-03 |
| 53 | GO:0032259: methylation | 6.23E-03 |
| 54 | GO:0016311: dephosphorylation | 6.54E-03 |
| 55 | GO:0009817: defense response to fungus, incompatible interaction | 6.77E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 6.77E-03 |
| 57 | GO:0009813: flavonoid biosynthetic process | 7.01E-03 |
| 58 | GO:0009867: jasmonic acid mediated signaling pathway | 7.99E-03 |
| 59 | GO:0009637: response to blue light | 7.99E-03 |
| 60 | GO:0006631: fatty acid metabolic process | 9.01E-03 |
| 61 | GO:0006887: exocytosis | 9.01E-03 |
| 62 | GO:0006412: translation | 9.16E-03 |
| 63 | GO:0010114: response to red light | 9.53E-03 |
| 64 | GO:0009644: response to high light intensity | 1.01E-02 |
| 65 | GO:0009735: response to cytokinin | 1.06E-02 |
| 66 | GO:0055085: transmembrane transport | 1.47E-02 |
| 67 | GO:0006457: protein folding | 1.50E-02 |
| 68 | GO:0006396: RNA processing | 1.54E-02 |
| 69 | GO:0006633: fatty acid biosynthetic process | 2.08E-02 |
| 70 | GO:0006413: translational initiation | 2.12E-02 |
| 71 | GO:0006470: protein dephosphorylation | 2.45E-02 |
| 72 | GO:0007049: cell cycle | 3.28E-02 |
| 73 | GO:0080167: response to karrikin | 3.54E-02 |
| 74 | GO:0006886: intracellular protein transport | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 2 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 5 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 6 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.34E-06 |
| 8 | GO:0019843: rRNA binding | 6.45E-06 |
| 9 | GO:0050308: sugar-phosphatase activity | 4.04E-05 |
| 10 | GO:0019203: carbohydrate phosphatase activity | 4.04E-05 |
| 11 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 4.04E-05 |
| 12 | GO:0005528: FK506 binding | 9.13E-05 |
| 13 | GO:0004047: aminomethyltransferase activity | 1.00E-04 |
| 14 | GO:0030385: ferredoxin:thioredoxin reductase activity | 1.00E-04 |
| 15 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.00E-04 |
| 16 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.00E-04 |
| 17 | GO:0022891: substrate-specific transmembrane transporter activity | 1.38E-04 |
| 18 | GO:0005504: fatty acid binding | 1.73E-04 |
| 19 | GO:0004751: ribose-5-phosphate isomerase activity | 1.73E-04 |
| 20 | GO:0016149: translation release factor activity, codon specific | 2.55E-04 |
| 21 | GO:0016987: sigma factor activity | 3.43E-04 |
| 22 | GO:0043495: protein anchor | 3.43E-04 |
| 23 | GO:0045430: chalcone isomerase activity | 3.43E-04 |
| 24 | GO:0001053: plastid sigma factor activity | 3.43E-04 |
| 25 | GO:0016168: chlorophyll binding | 3.73E-04 |
| 26 | GO:2001070: starch binding | 5.37E-04 |
| 27 | GO:0019899: enzyme binding | 7.49E-04 |
| 28 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.10E-03 |
| 29 | GO:0003747: translation release factor activity | 1.10E-03 |
| 30 | GO:0031072: heat shock protein binding | 1.77E-03 |
| 31 | GO:0043424: protein histidine kinase binding | 2.55E-03 |
| 32 | GO:0042802: identical protein binding | 2.94E-03 |
| 33 | GO:0008168: methyltransferase activity | 3.44E-03 |
| 34 | GO:0008483: transaminase activity | 5.21E-03 |
| 35 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 6.54E-03 |
| 36 | GO:0009055: electron carrier activity | 6.98E-03 |
| 37 | GO:0000149: SNARE binding | 8.49E-03 |
| 38 | GO:0005484: SNAP receptor activity | 9.53E-03 |
| 39 | GO:0003735: structural constituent of ribosome | 1.03E-02 |
| 40 | GO:0005198: structural molecule activity | 1.03E-02 |
| 41 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 42 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 43 | GO:0005515: protein binding | 1.74E-02 |
| 44 | GO:0003743: translation initiation factor activity | 2.48E-02 |
| 45 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 46 | GO:0003924: GTPase activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.08E-26 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 4.32E-21 |
| 4 | GO:0009579: thylakoid | 9.16E-14 |
| 5 | GO:0009534: chloroplast thylakoid | 9.68E-14 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.66E-11 |
| 7 | GO:0031977: thylakoid lumen | 1.31E-10 |
| 8 | GO:0009570: chloroplast stroma | 1.55E-10 |
| 9 | GO:0009941: chloroplast envelope | 3.67E-10 |
| 10 | GO:0009538: photosystem I reaction center | 1.36E-05 |
| 11 | GO:0009515: granal stacked thylakoid | 4.04E-05 |
| 12 | GO:0042651: thylakoid membrane | 1.02E-04 |
| 13 | GO:0009532: plastid stroma | 1.13E-04 |
| 14 | GO:0005840: ribosome | 1.22E-04 |
| 15 | GO:0009528: plastid inner membrane | 1.73E-04 |
| 16 | GO:0009523: photosystem II | 2.26E-04 |
| 17 | GO:0009527: plastid outer membrane | 3.43E-04 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 7.49E-04 |
| 19 | GO:0010287: plastoglobule | 1.61E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 1.92E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 2.55E-03 |
| 22 | GO:0009504: cell plate | 4.19E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 4.19E-03 |
| 24 | GO:0010319: stromule | 5.21E-03 |
| 25 | GO:0009536: plastid | 5.57E-03 |
| 26 | GO:0009707: chloroplast outer membrane | 6.77E-03 |
| 27 | GO:0015934: large ribosomal subunit | 7.49E-03 |
| 28 | GO:0031201: SNARE complex | 9.01E-03 |
| 29 | GO:0022626: cytosolic ribosome | 1.11E-02 |
| 30 | GO:0012505: endomembrane system | 1.48E-02 |
| 31 | GO:0009706: chloroplast inner membrane | 1.51E-02 |
| 32 | GO:0009524: phragmoplast | 1.84E-02 |
| 33 | GO:0016020: membrane | 1.98E-02 |
| 34 | GO:0046658: anchored component of plasma membrane | 2.72E-02 |
| 35 | GO:0005874: microtubule | 3.45E-02 |