co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G14560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046292: formaldehyde metabolic process	0.00E+00
2	GO:0046294: formaldehyde catabolic process	0.00E+00
3	GO:0009992: cellular water homeostasis	0.00E+00
4	GO:0019428: allantoin biosynthetic process	0.00E+00
5	GO:0006721: terpenoid metabolic process	0.00E+00
6	GO:0010513: positive regulation of phosphatidylinositol biosynthetic process	0.00E+00
7	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
8	GO:0006069: ethanol oxidation	0.00E+00
9	GO:0006592: ornithine biosynthetic process	0.00E+00
10	GO:0046890: regulation of lipid biosynthetic process	0.00E+00
11	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
12	GO:0051776: detection of redox state	0.00E+00
13	GO:0009751: response to salicylic acid	2.64E-05
14	GO:0051603: proteolysis involved in cellular protein catabolic process	5.49E-05
15	GO:0006508: proteolysis	1.11E-04
16	GO:0019628: urate catabolic process	1.35E-04
17	GO:0016487: farnesol metabolic process	1.35E-04
18	GO:0006007: glucose catabolic process	1.35E-04
19	GO:0031468: nuclear envelope reassembly	1.35E-04
20	GO:0006144: purine nucleobase metabolic process	1.35E-04
21	GO:0001560: regulation of cell growth by extracellular stimulus	1.35E-04
22	GO:2000028: regulation of photoperiodism, flowering	3.08E-04
23	GO:0055088: lipid homeostasis	3.11E-04
24	GO:0006432: phenylalanyl-tRNA aminoacylation	3.11E-04
25	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	3.11E-04
26	GO:0019441: tryptophan catabolic process to kynurenine	3.11E-04
27	GO:0009308: amine metabolic process	3.11E-04
28	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.11E-04
29	GO:0071712: ER-associated misfolded protein catabolic process	3.11E-04
30	GO:0046417: chorismate metabolic process	5.13E-04
31	GO:0045793: positive regulation of cell size	5.13E-04
32	GO:0071494: cellular response to UV-C	5.13E-04
33	GO:0009311: oligosaccharide metabolic process	7.34E-04
34	GO:0006107: oxaloacetate metabolic process	7.34E-04
35	GO:0006809: nitric oxide biosynthetic process	7.34E-04
36	GO:0035067: negative regulation of histone acetylation	7.34E-04
37	GO:0006164: purine nucleotide biosynthetic process	7.34E-04
38	GO:0009113: purine nucleobase biosynthetic process	7.34E-04
39	GO:1901332: negative regulation of lateral root development	7.34E-04
40	GO:0051289: protein homotetramerization	7.34E-04
41	GO:1902290: positive regulation of defense response to oomycetes	7.34E-04
42	GO:0032877: positive regulation of DNA endoreduplication	7.34E-04
43	GO:0006624: vacuolar protein processing	7.34E-04
44	GO:0045454: cell redox homeostasis	9.25E-04
45	GO:0006749: glutathione metabolic process	9.73E-04
46	GO:0032366: intracellular sterol transport	9.73E-04
47	GO:0031507: heterochromatin assembly	9.73E-04
48	GO:0010109: regulation of photosynthesis	9.73E-04
49	GO:0051781: positive regulation of cell division	9.73E-04
50	GO:0009229: thiamine diphosphate biosynthetic process	1.23E-03
51	GO:0009228: thiamine biosynthetic process	1.51E-03
52	GO:0006796: phosphate-containing compound metabolic process	1.51E-03
53	GO:0009117: nucleotide metabolic process	1.51E-03
54	GO:0006014: D-ribose metabolic process	1.51E-03
55	GO:0009759: indole glucosinolate biosynthetic process	1.51E-03
56	GO:0006751: glutathione catabolic process	1.51E-03
57	GO:0009615: response to virus	1.64E-03
58	GO:0009612: response to mechanical stimulus	1.81E-03
59	GO:0071446: cellular response to salicylic acid stimulus	2.12E-03
60	GO:1900056: negative regulation of leaf senescence	2.12E-03
61	GO:0050790: regulation of catalytic activity	2.12E-03
62	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.12E-03
63	GO:1900150: regulation of defense response to fungus	2.46E-03
64	GO:0009850: auxin metabolic process	2.46E-03
65	GO:0000028: ribosomal small subunit assembly	2.46E-03
66	GO:0006002: fructose 6-phosphate metabolic process	2.81E-03
67	GO:0010120: camalexin biosynthetic process	2.81E-03
68	GO:0006526: arginine biosynthetic process	2.81E-03
69	GO:0009826: unidimensional cell growth	2.91E-03
70	GO:0046685: response to arsenic-containing substance	3.17E-03
71	GO:0009821: alkaloid biosynthetic process	3.17E-03
72	GO:0006189: 'de novo' IMP biosynthetic process	3.17E-03
73	GO:0009926: auxin polar transport	3.47E-03
74	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.55E-03
75	GO:0006325: chromatin organization	3.95E-03
76	GO:0072593: reactive oxygen species metabolic process	4.36E-03
77	GO:0009073: aromatic amino acid family biosynthetic process	4.36E-03
78	GO:0006378: mRNA polyadenylation	4.36E-03
79	GO:0006807: nitrogen compound metabolic process	5.22E-03
80	GO:0006108: malate metabolic process	5.22E-03
81	GO:0006096: glycolytic process	5.50E-03
82	GO:0009620: response to fungus	6.05E-03
83	GO:0007030: Golgi organization	6.14E-03
84	GO:0010053: root epidermal cell differentiation	6.14E-03
85	GO:0016569: covalent chromatin modification	6.23E-03
86	GO:0006629: lipid metabolic process	6.58E-03
87	GO:0034976: response to endoplasmic reticulum stress	6.62E-03
88	GO:0006071: glycerol metabolic process	6.62E-03
89	GO:0009742: brassinosteroid mediated signaling pathway	7.02E-03
90	GO:0009863: salicylic acid mediated signaling pathway	7.11E-03
91	GO:0009753: response to jasmonic acid	7.20E-03
92	GO:0019915: lipid storage	8.14E-03
93	GO:0016226: iron-sulfur cluster assembly	8.67E-03
94	GO:0034220: ion transmembrane transport	1.09E-02
95	GO:0010118: stomatal movement	1.09E-02
96	GO:0006662: glycerol ether metabolic process	1.15E-02
97	GO:0010150: leaf senescence	1.15E-02
98	GO:0006342: chromatin silencing	1.15E-02
99	GO:0015986: ATP synthesis coupled proton transport	1.21E-02
100	GO:0061025: membrane fusion	1.21E-02
101	GO:0009791: post-embryonic development	1.27E-02
102	GO:0007166: cell surface receptor signaling pathway	1.31E-02
103	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.34E-02
104	GO:0010090: trichome morphogenesis	1.46E-02
105	GO:0006914: autophagy	1.53E-02
106	GO:0010286: heat acclimation	1.60E-02
107	GO:0000910: cytokinesis	1.66E-02
108	GO:0046686: response to cadmium ion	1.72E-02
109	GO:0016126: sterol biosynthetic process	1.73E-02
110	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.80E-02
111	GO:0006974: cellular response to DNA damage stimulus	1.88E-02
112	GO:0009627: systemic acquired resistance	1.88E-02
113	GO:0006950: response to stress	1.95E-02
114	GO:0009723: response to ethylene	2.06E-02
115	GO:0008219: cell death	2.09E-02
116	GO:0010311: lateral root formation	2.17E-02
117	GO:0009407: toxin catabolic process	2.24E-02
118	GO:0009853: photorespiration	2.48E-02
119	GO:0045087: innate immune response	2.48E-02
120	GO:0034599: cellular response to oxidative stress	2.56E-02
121	GO:0045892: negative regulation of transcription, DNA-templated	2.68E-02
122	GO:0051707: response to other organism	2.97E-02
123	GO:0009636: response to toxic substance	3.23E-02
124	GO:0009965: leaf morphogenesis	3.23E-02
125	GO:0006281: DNA repair	3.26E-02
126	GO:0031347: regulation of defense response	3.40E-02
127	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.40E-02
128	GO:0010224: response to UV-B	3.76E-02
129	GO:0048316: seed development	4.23E-02
130	GO:0051726: regulation of cell cycle	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0050152: omega-amidase activity	0.00E+00
2	GO:0004637: phosphoribosylamine-glycine ligase activity	0.00E+00
3	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
4	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
5	GO:0050334: thiaminase activity	0.00E+00
6	GO:0047886: farnesol dehydrogenase activity	0.00E+00
7	GO:0008777: acetylornithine deacetylase activity	0.00E+00
8	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
9	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
10	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
11	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
12	GO:0035529: NADH pyrophosphatase activity	8.07E-06
13	GO:0008234: cysteine-type peptidase activity	6.24E-05
14	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.35E-04
15	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.35E-04
16	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.35E-04
17	GO:0052595: aliphatic-amine oxidase activity	1.35E-04
18	GO:0030611: arsenate reductase activity	1.35E-04
19	GO:0010179: IAA-Ala conjugate hydrolase activity	1.35E-04
20	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	3.11E-04
21	GO:0004826: phenylalanine-tRNA ligase activity	3.11E-04
22	GO:0004106: chorismate mutase activity	3.11E-04
23	GO:0004061: arylformamidase activity	3.11E-04
24	GO:0044390: ubiquitin-like protein conjugating enzyme binding	3.11E-04
25	GO:0004557: alpha-galactosidase activity	5.13E-04
26	GO:0016805: dipeptidase activity	5.13E-04
27	GO:0052692: raffinose alpha-galactosidase activity	5.13E-04
28	GO:0008430: selenium binding	5.13E-04
29	GO:0000254: C-4 methylsterol oxidase activity	7.34E-04
30	GO:0010178: IAA-amino acid conjugate hydrolase activity	7.34E-04
31	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	9.73E-04
32	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	9.73E-04
33	GO:0010011: auxin binding	9.73E-04
34	GO:0004197: cysteine-type endopeptidase activity	1.22E-03
35	GO:0047631: ADP-ribose diphosphatase activity	1.23E-03
36	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.30E-03
37	GO:0008237: metallopeptidase activity	1.47E-03
38	GO:0000210: NAD+ diphosphatase activity	1.51E-03
39	GO:0051117: ATPase binding	1.51E-03
40	GO:0004747: ribokinase activity	1.81E-03
41	GO:0030247: polysaccharide binding	1.93E-03
42	GO:0008235: metalloexopeptidase activity	2.12E-03
43	GO:0042162: telomeric DNA binding	2.12E-03
44	GO:0004427: inorganic diphosphatase activity	2.12E-03
45	GO:0003872: 6-phosphofructokinase activity	2.12E-03
46	GO:0016787: hydrolase activity	2.44E-03
47	GO:0030145: manganese ion binding	2.46E-03
48	GO:0035064: methylated histone binding	2.46E-03
49	GO:0016788: hydrolase activity, acting on ester bonds	3.13E-03
50	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.17E-03
51	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.17E-03
52	GO:0047617: acyl-CoA hydrolase activity	3.55E-03
53	GO:0016844: strictosidine synthase activity	3.55E-03
54	GO:0008047: enzyme activator activity	3.95E-03
55	GO:0004860: protein kinase inhibitor activity	4.36E-03
56	GO:0008794: arsenate reductase (glutaredoxin) activity	4.36E-03
57	GO:0008327: methyl-CpG binding	4.36E-03
58	GO:0004177: aminopeptidase activity	4.36E-03
59	GO:0004521: endoribonuclease activity	4.79E-03
60	GO:0000049: tRNA binding	4.79E-03
61	GO:0000976: transcription regulatory region sequence-specific DNA binding	4.79E-03
62	GO:0004022: alcohol dehydrogenase (NAD) activity	5.22E-03
63	GO:0004089: carbonate dehydratase activity	5.22E-03
64	GO:0004175: endopeptidase activity	5.68E-03
65	GO:0008131: primary amine oxidase activity	5.68E-03
66	GO:0003712: transcription cofactor activity	6.14E-03
67	GO:0004725: protein tyrosine phosphatase activity	6.62E-03
68	GO:0015035: protein disulfide oxidoreductase activity	6.82E-03
69	GO:0043130: ubiquitin binding	7.11E-03
70	GO:0004298: threonine-type endopeptidase activity	8.14E-03
71	GO:0003756: protein disulfide isomerase activity	9.77E-03
72	GO:0047134: protein-disulfide reductase activity	1.03E-02
73	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.15E-02
74	GO:0050662: coenzyme binding	1.21E-02
75	GO:0004791: thioredoxin-disulfide reductase activity	1.21E-02
76	GO:0004872: receptor activity	1.27E-02
77	GO:0048038: quinone binding	1.34E-02
78	GO:0046872: metal ion binding	1.52E-02
79	GO:0015250: water channel activity	1.73E-02
80	GO:0004806: triglyceride lipase activity	1.95E-02
81	GO:0050897: cobalt ion binding	2.32E-02
82	GO:0003697: single-stranded DNA binding	2.48E-02
83	GO:0004364: glutathione transferase activity	2.88E-02
84	GO:0004185: serine-type carboxypeptidase activity	2.97E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	3.14E-02
86	GO:0051287: NAD binding	3.40E-02
87	GO:0005515: protein binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	7.30E-07
2	GO:0000323: lytic vacuole	8.07E-06
3	GO:0005773: vacuole	3.56E-05
4	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	1.35E-04
5	GO:0005697: telomerase holoenzyme complex	3.11E-04
6	GO:0036513: Derlin-1 retrotranslocation complex	7.34E-04
7	GO:0005849: mRNA cleavage factor complex	7.34E-04
8	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	9.73E-04
9	GO:0005783: endoplasmic reticulum	1.10E-03
10	GO:0005945: 6-phosphofructokinase complex	1.23E-03
11	GO:0005788: endoplasmic reticulum lumen	1.74E-03
12	GO:0000421: autophagosome membrane	2.46E-03
13	GO:0005677: chromatin silencing complex	2.81E-03
14	GO:0005763: mitochondrial small ribosomal subunit	3.17E-03
15	GO:0009508: plastid chromosome	5.22E-03
16	GO:0005764: lysosome	5.68E-03
17	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.14E-03
18	GO:0045271: respiratory chain complex I	7.62E-03
19	GO:0005839: proteasome core complex	8.14E-03
20	GO:0031410: cytoplasmic vesicle	8.67E-03
21	GO:0005615: extracellular space	1.28E-02
22	GO:0000785: chromatin	1.40E-02
23	GO:0009295: nucleoid	1.60E-02
24	GO:0005777: peroxisome	1.63E-02
25	GO:0048046: apoplast	2.09E-02
26	GO:0005576: extracellular region	2.14E-02
27	GO:0031225: anchored component of membrane	2.39E-02
28	GO:0009507: chloroplast	3.16E-02
29	GO:0031966: mitochondrial membrane	3.49E-02
30	GO:0000502: proteasome complex	3.67E-02
31	GO:0005737: cytoplasm	3.97E-02
32	GO:0005747: mitochondrial respiratory chain complex I	4.23E-02
33	GO:0009505: plant-type cell wall	4.37E-02