co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G04850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034971: histone H3-R17 methylation	1.87E-05
2	GO:0071461: cellular response to redox state	1.87E-05
3	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.87E-05
4	GO:0034970: histone H3-R2 methylation	1.87E-05
5	GO:0034972: histone H3-R26 methylation	1.87E-05
6	GO:0080005: photosystem stoichiometry adjustment	4.85E-05
7	GO:0007154: cell communication	4.85E-05
8	GO:0080183: response to photooxidative stress	4.85E-05
9	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	4.85E-05
10	GO:1901562: response to paraquat	8.61E-05
11	GO:2001141: regulation of RNA biosynthetic process	1.30E-04
12	GO:0006508: proteolysis	1.42E-04
13	GO:0034613: cellular protein localization	1.78E-04
14	GO:0033365: protein localization to organelle	2.85E-04
15	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.85E-04
16	GO:0010019: chloroplast-nucleus signaling pathway	3.42E-04
17	GO:0071482: cellular response to light stimulus	5.27E-04
18	GO:0015996: chlorophyll catabolic process	5.27E-04
19	GO:0046916: cellular transition metal ion homeostasis	5.93E-04
20	GO:0043085: positive regulation of catalytic activity	8.02E-04
21	GO:0006352: DNA-templated transcription, initiation	8.02E-04
22	GO:0018119: peptidyl-cysteine S-nitrosylation	8.02E-04
23	GO:0006108: malate metabolic process	9.49E-04
24	GO:0006012: galactose metabolic process	1.61E-03
25	GO:0005975: carbohydrate metabolic process	2.12E-03
26	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.29E-03
27	GO:0016126: sterol biosynthetic process	2.94E-03
28	GO:0015995: chlorophyll biosynthetic process	3.28E-03
29	GO:0010043: response to zinc ion	3.88E-03
30	GO:0007568: aging	3.88E-03
31	GO:0006099: tricarboxylic acid cycle	4.26E-03
32	GO:0030001: metal ion transport	4.51E-03
33	GO:0051603: proteolysis involved in cellular protein catabolic process	6.17E-03
34	GO:0009909: regulation of flower development	6.46E-03
35	GO:0010228: vegetative to reproductive phase transition of meristem	1.16E-02
36	GO:0009409: response to cold	1.21E-02
37	GO:0009408: response to heat	2.36E-02
38	GO:0006457: protein folding	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0016783: sulfurtransferase activity	1.87E-05
2	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	1.87E-05
3	GO:0046906: tetrapyrrole binding	1.87E-05
4	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	4.85E-05
5	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	4.85E-05
6	GO:0004046: aminoacylase activity	4.85E-05
7	GO:0035241: protein-arginine omega-N monomethyltransferase activity	4.85E-05
8	GO:0008469: histone-arginine N-methyltransferase activity	8.61E-05
9	GO:0004180: carboxypeptidase activity	8.61E-05
10	GO:0004792: thiosulfate sulfurtransferase activity	1.30E-04
11	GO:0000254: C-4 methylsterol oxidase activity	1.30E-04
12	GO:0001053: plastid sigma factor activity	1.78E-04
13	GO:0016987: sigma factor activity	1.78E-04
14	GO:0030060: L-malate dehydrogenase activity	3.42E-04
15	GO:0019899: enzyme binding	4.02E-04
16	GO:0004034: aldose 1-epimerase activity	4.64E-04
17	GO:0046914: transition metal ion binding	5.27E-04
18	GO:0004252: serine-type endopeptidase activity	7.47E-04
19	GO:0031072: heat shock protein binding	9.49E-04
20	GO:0015266: protein channel activity	9.49E-04
21	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.02E-03
22	GO:0004176: ATP-dependent peptidase activity	1.44E-03
23	GO:0008080: N-acetyltransferase activity	1.99E-03
24	GO:0016853: isomerase activity	2.09E-03
25	GO:0048038: quinone binding	2.29E-03
26	GO:0008237: metallopeptidase activity	2.72E-03
27	GO:0030247: polysaccharide binding	3.28E-03
28	GO:0008236: serine-type peptidase activity	3.40E-03
29	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.51E-03
30	GO:0004222: metalloendopeptidase activity	3.76E-03
31	GO:0004185: serine-type carboxypeptidase activity	4.91E-03
32	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.02E-03
33	GO:0051082: unfolded protein binding	7.69E-03
34	GO:0008168: methyltransferase activity	1.50E-02
35	GO:0046982: protein heterodimerization activity	1.52E-02
36	GO:0042803: protein homodimerization activity	2.10E-02
37	GO:0016887: ATPase activity	3.23E-02
38	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.33E-02
39	GO:0030246: carbohydrate binding	4.39E-02
40	GO:0005507: copper ion binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.18E-07
2	GO:0009527: plastid outer membrane	1.78E-04
3	GO:0009535: chloroplast thylakoid membrane	5.76E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.93E-04
5	GO:0010287: plastoglobule	6.42E-04
6	GO:0009505: plant-type cell wall	1.67E-03
7	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.70E-03
8	GO:0005747: mitochondrial respiratory chain complex I	6.91E-03
9	GO:0005618: cell wall	7.15E-03
10	GO:0005759: mitochondrial matrix	1.06E-02
11	GO:0046658: anchored component of plasma membrane	1.37E-02
12	GO:0031969: chloroplast membrane	1.79E-02
13	GO:0005743: mitochondrial inner membrane	2.24E-02
14	GO:0009506: plasmodesma	3.28E-02
15	GO:0005777: peroxisome	3.92E-02
16	GO:0009534: chloroplast thylakoid	4.07E-02
17	GO:0005773: vacuole	4.73E-02
18	GO:0031225: anchored component of membrane	4.88E-02