GO Enrichment Analysis of Co-expressed Genes with
AT2G04420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 7 | GO:0006412: translation | 3.06E-10 |
| 8 | GO:0032544: plastid translation | 1.32E-09 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 7.08E-09 |
| 10 | GO:0015979: photosynthesis | 3.66E-08 |
| 11 | GO:0009658: chloroplast organization | 7.51E-06 |
| 12 | GO:0042254: ribosome biogenesis | 7.87E-06 |
| 13 | GO:0009735: response to cytokinin | 8.23E-06 |
| 14 | GO:0009657: plastid organization | 4.07E-05 |
| 15 | GO:0015995: chlorophyll biosynthetic process | 4.64E-05 |
| 16 | GO:0010206: photosystem II repair | 5.07E-05 |
| 17 | GO:0080093: regulation of photorespiration | 6.91E-05 |
| 18 | GO:0031998: regulation of fatty acid beta-oxidation | 6.91E-05 |
| 19 | GO:0046520: sphingoid biosynthetic process | 6.91E-05 |
| 20 | GO:0009409: response to cold | 1.42E-04 |
| 21 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.66E-04 |
| 22 | GO:0051262: protein tetramerization | 1.66E-04 |
| 23 | GO:0006518: peptide metabolic process | 2.81E-04 |
| 24 | GO:0048281: inflorescence morphogenesis | 2.81E-04 |
| 25 | GO:0006000: fructose metabolic process | 2.81E-04 |
| 26 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.06E-04 |
| 27 | GO:0010148: transpiration | 4.06E-04 |
| 28 | GO:0006546: glycine catabolic process | 5.42E-04 |
| 29 | GO:0010021: amylopectin biosynthetic process | 5.42E-04 |
| 30 | GO:0051322: anaphase | 5.42E-04 |
| 31 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.42E-04 |
| 32 | GO:0045727: positive regulation of translation | 5.42E-04 |
| 33 | GO:0000304: response to singlet oxygen | 6.87E-04 |
| 34 | GO:0006097: glyoxylate cycle | 6.87E-04 |
| 35 | GO:0006461: protein complex assembly | 6.87E-04 |
| 36 | GO:0010027: thylakoid membrane organization | 6.92E-04 |
| 37 | GO:0010190: cytochrome b6f complex assembly | 8.40E-04 |
| 38 | GO:0000470: maturation of LSU-rRNA | 8.40E-04 |
| 39 | GO:0009955: adaxial/abaxial pattern specification | 9.99E-04 |
| 40 | GO:1901259: chloroplast rRNA processing | 9.99E-04 |
| 41 | GO:0070370: cellular heat acclimation | 1.17E-03 |
| 42 | GO:0009645: response to low light intensity stimulus | 1.17E-03 |
| 43 | GO:0010103: stomatal complex morphogenesis | 1.17E-03 |
| 44 | GO:0005978: glycogen biosynthetic process | 1.34E-03 |
| 45 | GO:0001558: regulation of cell growth | 1.53E-03 |
| 46 | GO:0017004: cytochrome complex assembly | 1.53E-03 |
| 47 | GO:0006002: fructose 6-phosphate metabolic process | 1.53E-03 |
| 48 | GO:0005982: starch metabolic process | 1.93E-03 |
| 49 | GO:0000272: polysaccharide catabolic process | 2.36E-03 |
| 50 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.36E-03 |
| 51 | GO:0006415: translational termination | 2.36E-03 |
| 52 | GO:0015706: nitrate transport | 2.58E-03 |
| 53 | GO:0045037: protein import into chloroplast stroma | 2.58E-03 |
| 54 | GO:0006108: malate metabolic process | 2.82E-03 |
| 55 | GO:0030036: actin cytoskeleton organization | 2.82E-03 |
| 56 | GO:0006094: gluconeogenesis | 2.82E-03 |
| 57 | GO:0005986: sucrose biosynthetic process | 2.82E-03 |
| 58 | GO:0010102: lateral root morphogenesis | 2.82E-03 |
| 59 | GO:0019253: reductive pentose-phosphate cycle | 3.06E-03 |
| 60 | GO:0005985: sucrose metabolic process | 3.30E-03 |
| 61 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.81E-03 |
| 62 | GO:0000027: ribosomal large subunit assembly | 3.81E-03 |
| 63 | GO:0009790: embryo development | 3.91E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.08E-03 |
| 65 | GO:0051302: regulation of cell division | 4.08E-03 |
| 66 | GO:0007017: microtubule-based process | 4.08E-03 |
| 67 | GO:0031408: oxylipin biosynthetic process | 4.35E-03 |
| 68 | GO:0061077: chaperone-mediated protein folding | 4.35E-03 |
| 69 | GO:0001944: vasculature development | 4.91E-03 |
| 70 | GO:0042631: cellular response to water deprivation | 5.80E-03 |
| 71 | GO:0019252: starch biosynthetic process | 6.74E-03 |
| 72 | GO:0000302: response to reactive oxygen species | 7.07E-03 |
| 73 | GO:0010583: response to cyclopentenone | 7.40E-03 |
| 74 | GO:0030163: protein catabolic process | 7.73E-03 |
| 75 | GO:0000910: cytokinesis | 8.77E-03 |
| 76 | GO:0042128: nitrate assimilation | 9.87E-03 |
| 77 | GO:0042742: defense response to bacterium | 1.05E-02 |
| 78 | GO:0018298: protein-chromophore linkage | 1.10E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.10E-02 |
| 80 | GO:0034599: cellular response to oxidative stress | 1.34E-02 |
| 81 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 82 | GO:0009640: photomorphogenesis | 1.56E-02 |
| 83 | GO:0009644: response to high light intensity | 1.65E-02 |
| 84 | GO:0009965: leaf morphogenesis | 1.69E-02 |
| 85 | GO:0006810: transport | 1.71E-02 |
| 86 | GO:0009664: plant-type cell wall organization | 1.83E-02 |
| 87 | GO:0006364: rRNA processing | 1.92E-02 |
| 88 | GO:0006096: glycolytic process | 2.17E-02 |
| 89 | GO:0009793: embryo development ending in seed dormancy | 3.02E-02 |
| 90 | GO:0042744: hydrogen peroxide catabolic process | 3.18E-02 |
| 91 | GO:0040008: regulation of growth | 3.53E-02 |
| 92 | GO:0007623: circadian rhythm | 3.65E-02 |
| 93 | GO:0010468: regulation of gene expression | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 3.76E-17 |
| 3 | GO:0003735: structural constituent of ribosome | 1.13E-11 |
| 4 | GO:0016851: magnesium chelatase activity | 2.48E-06 |
| 5 | GO:0000170: sphingosine hydroxylase activity | 6.91E-05 |
| 6 | GO:0005227: calcium activated cation channel activity | 6.91E-05 |
| 7 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.66E-04 |
| 8 | GO:0010297: heteropolysaccharide binding | 1.66E-04 |
| 9 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.66E-04 |
| 10 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.66E-04 |
| 11 | GO:0008967: phosphoglycolate phosphatase activity | 1.66E-04 |
| 12 | GO:0043169: cation binding | 2.81E-04 |
| 13 | GO:0016149: translation release factor activity, codon specific | 4.06E-04 |
| 14 | GO:0043023: ribosomal large subunit binding | 4.06E-04 |
| 15 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.06E-04 |
| 16 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.06E-04 |
| 17 | GO:0042277: peptide binding | 5.42E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.42E-04 |
| 19 | GO:0019199: transmembrane receptor protein kinase activity | 5.42E-04 |
| 20 | GO:0005200: structural constituent of cytoskeleton | 6.19E-04 |
| 21 | GO:0016615: malate dehydrogenase activity | 8.40E-04 |
| 22 | GO:0004130: cytochrome-c peroxidase activity | 8.40E-04 |
| 23 | GO:0030060: L-malate dehydrogenase activity | 9.99E-04 |
| 24 | GO:0005261: cation channel activity | 9.99E-04 |
| 25 | GO:0003747: translation release factor activity | 1.73E-03 |
| 26 | GO:0015112: nitrate transmembrane transporter activity | 1.93E-03 |
| 27 | GO:0031072: heat shock protein binding | 2.82E-03 |
| 28 | GO:0004565: beta-galactosidase activity | 2.82E-03 |
| 29 | GO:0031409: pigment binding | 3.56E-03 |
| 30 | GO:0005528: FK506 binding | 3.81E-03 |
| 31 | GO:0003756: protein disulfide isomerase activity | 5.20E-03 |
| 32 | GO:0050662: coenzyme binding | 6.42E-03 |
| 33 | GO:0048038: quinone binding | 7.07E-03 |
| 34 | GO:0016168: chlorophyll binding | 9.50E-03 |
| 35 | GO:0008236: serine-type peptidase activity | 1.06E-02 |
| 36 | GO:0003824: catalytic activity | 1.18E-02 |
| 37 | GO:0004222: metalloendopeptidase activity | 1.18E-02 |
| 38 | GO:0003723: RNA binding | 1.59E-02 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.74E-02 |
| 40 | GO:0051082: unfolded protein binding | 2.47E-02 |
| 41 | GO:0016829: lyase activity | 3.07E-02 |
| 42 | GO:0004252: serine-type endopeptidase activity | 3.12E-02 |
| 43 | GO:0008565: protein transporter activity | 3.30E-02 |
| 44 | GO:0008017: microtubule binding | 3.77E-02 |
| 45 | GO:0004601: peroxidase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 6.26E-34 |
| 4 | GO:0009534: chloroplast thylakoid | 7.67E-25 |
| 5 | GO:0009570: chloroplast stroma | 9.45E-25 |
| 6 | GO:0009941: chloroplast envelope | 1.48E-23 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 4.37E-18 |
| 8 | GO:0005840: ribosome | 2.08E-13 |
| 9 | GO:0009579: thylakoid | 1.41E-10 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 2.90E-08 |
| 11 | GO:0010007: magnesium chelatase complex | 1.03E-06 |
| 12 | GO:0031977: thylakoid lumen | 3.68E-06 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 2.41E-05 |
| 14 | GO:0016020: membrane | 4.44E-05 |
| 15 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.07E-05 |
| 16 | GO:0009782: photosystem I antenna complex | 6.91E-05 |
| 17 | GO:0030095: chloroplast photosystem II | 1.36E-04 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.66E-04 |
| 19 | GO:0030093: chloroplast photosystem I | 1.66E-04 |
| 20 | GO:0048046: apoplast | 2.74E-04 |
| 21 | GO:0010287: plastoglobule | 3.52E-04 |
| 22 | GO:0005960: glycine cleavage complex | 4.06E-04 |
| 23 | GO:0009522: photosystem I | 4.23E-04 |
| 24 | GO:0010319: stromule | 6.19E-04 |
| 25 | GO:0055035: plastid thylakoid membrane | 6.87E-04 |
| 26 | GO:0009501: amyloplast | 1.34E-03 |
| 27 | GO:0022625: cytosolic large ribosomal subunit | 1.35E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 1.73E-03 |
| 29 | GO:0045298: tubulin complex | 1.73E-03 |
| 30 | GO:0009706: chloroplast inner membrane | 2.69E-03 |
| 31 | GO:0009508: plastid chromosome | 2.82E-03 |
| 32 | GO:0009574: preprophase band | 2.82E-03 |
| 33 | GO:0009536: plastid | 2.99E-03 |
| 34 | GO:0030076: light-harvesting complex | 3.30E-03 |
| 35 | GO:0005623: cell | 3.45E-03 |
| 36 | GO:0043234: protein complex | 3.56E-03 |
| 37 | GO:0022626: cytosolic ribosome | 4.05E-03 |
| 38 | GO:0042651: thylakoid membrane | 4.08E-03 |
| 39 | GO:0009654: photosystem II oxygen evolving complex | 4.08E-03 |
| 40 | GO:0015935: small ribosomal subunit | 4.35E-03 |
| 41 | GO:0009523: photosystem II | 6.74E-03 |
| 42 | GO:0019898: extrinsic component of membrane | 6.74E-03 |
| 43 | GO:0009295: nucleoid | 8.42E-03 |
| 44 | GO:0005874: microtubule | 8.55E-03 |
| 45 | GO:0015934: large ribosomal subunit | 1.22E-02 |
| 46 | GO:0005856: cytoskeleton | 1.69E-02 |
| 47 | GO:0005777: peroxisome | 2.67E-02 |
| 48 | GO:0009524: phragmoplast | 3.01E-02 |
| 49 | GO:0009705: plant-type vacuole membrane | 3.65E-02 |
| 50 | GO:0005622: intracellular | 4.12E-02 |