Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042908: xenobiotic transport0.00E+00
2GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
3GO:0009856: pollination0.00E+00
4GO:0009722: detection of cytokinin stimulus0.00E+00
5GO:0018293: protein-FAD linkage0.00E+00
6GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
7GO:0006593: ornithine catabolic process0.00E+00
8GO:0071345: cellular response to cytokine stimulus0.00E+00
9GO:0042430: indole-containing compound metabolic process0.00E+00
10GO:0042178: xenobiotic catabolic process0.00E+00
11GO:0023052: signaling0.00E+00
12GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport0.00E+00
13GO:0019320: hexose catabolic process0.00E+00
14GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
15GO:0055114: oxidation-reduction process1.55E-05
16GO:0006006: glucose metabolic process1.94E-05
17GO:0006097: glyoxylate cycle4.37E-05
18GO:0006631: fatty acid metabolic process6.14E-05
19GO:0010189: vitamin E biosynthetic process9.02E-05
20GO:0051603: proteolysis involved in cellular protein catabolic process1.31E-04
21GO:0009651: response to salt stress1.72E-04
22GO:0015798: myo-inositol transport1.91E-04
23GO:0006083: acetate metabolic process1.91E-04
24GO:0006148: inosine catabolic process1.91E-04
25GO:0000305: response to oxygen radical1.91E-04
26GO:0006805: xenobiotic metabolic process1.91E-04
27GO:1903409: reactive oxygen species biosynthetic process1.91E-04
28GO:0009852: auxin catabolic process1.91E-04
29GO:1901349: glucosinolate transport1.91E-04
30GO:0015812: gamma-aminobutyric acid transport1.91E-04
31GO:0010265: SCF complex assembly1.91E-04
32GO:0090449: phloem glucosinolate loading1.91E-04
33GO:0006560: proline metabolic process1.91E-04
34GO:0019544: arginine catabolic process to glutamate1.91E-04
35GO:0019605: butyrate metabolic process1.91E-04
36GO:0080144: amino acid homeostasis2.33E-04
37GO:0005975: carbohydrate metabolic process2.54E-04
38GO:0009684: indoleacetic acid biosynthetic process3.78E-04
39GO:1990069: stomatal opening4.29E-04
40GO:0043100: pyrimidine nucleobase salvage4.29E-04
41GO:0010133: proline catabolic process to glutamate4.29E-04
42GO:0006101: citrate metabolic process4.29E-04
43GO:0019388: galactose catabolic process4.29E-04
44GO:0009915: phloem sucrose loading4.29E-04
45GO:0032527: protein exit from endoplasmic reticulum4.29E-04
46GO:0080026: response to indolebutyric acid4.29E-04
47GO:0012501: programmed cell death4.34E-04
48GO:0002213: defense response to insect4.34E-04
49GO:0006099: tricarboxylic acid cycle5.51E-04
50GO:0009833: plant-type primary cell wall biogenesis6.92E-04
51GO:0045493: xylan catabolic process6.99E-04
52GO:0051646: mitochondrion localization6.99E-04
53GO:0009636: response to toxic substance8.31E-04
54GO:0006855: drug transmembrane transport8.71E-04
55GO:0048511: rhythmic process9.21E-04
56GO:0046686: response to cadmium ion9.92E-04
57GO:0006572: tyrosine catabolic process9.97E-04
58GO:1902476: chloride transmembrane transport9.97E-04
59GO:0010255: glucose mediated signaling pathway9.97E-04
60GO:0009590: detection of gravity9.97E-04
61GO:0010148: transpiration9.97E-04
62GO:0015700: arsenite transport9.97E-04
63GO:0080024: indolebutyric acid metabolic process9.97E-04
64GO:0006096: glycolytic process1.28E-03
65GO:0006542: glutamine biosynthetic process1.32E-03
66GO:0006646: phosphatidylethanolamine biosynthetic process1.32E-03
67GO:0010363: regulation of plant-type hypersensitive response1.32E-03
68GO:0006221: pyrimidine nucleotide biosynthetic process1.32E-03
69GO:0044205: 'de novo' UMP biosynthetic process1.32E-03
70GO:0006749: glutathione metabolic process1.32E-03
71GO:0032366: intracellular sterol transport1.32E-03
72GO:0000271: polysaccharide biosynthetic process1.38E-03
73GO:0080022: primary root development1.38E-03
74GO:0009611: response to wounding1.56E-03
75GO:0007029: endoplasmic reticulum organization1.68E-03
76GO:0009435: NAD biosynthetic process1.68E-03
77GO:0009697: salicylic acid biosynthetic process1.68E-03
78GO:0006564: L-serine biosynthetic process1.68E-03
79GO:0006561: proline biosynthetic process2.07E-03
80GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.07E-03
81GO:0042732: D-xylose metabolic process2.07E-03
82GO:0002238: response to molecule of fungal origin2.07E-03
83GO:0009058: biosynthetic process2.29E-03
84GO:0010019: chloroplast-nucleus signaling pathway2.49E-03
85GO:0046835: carbohydrate phosphorylation2.49E-03
86GO:0009816: defense response to bacterium, incompatible interaction2.78E-03
87GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.93E-03
88GO:0006821: chloride transport2.93E-03
89GO:0010150: leaf senescence3.22E-03
90GO:0048658: anther wall tapetum development3.40E-03
91GO:0006102: isocitrate metabolic process3.40E-03
92GO:0005978: glycogen biosynthetic process3.40E-03
93GO:0006491: N-glycan processing3.40E-03
94GO:0030244: cellulose biosynthetic process3.42E-03
95GO:0015996: chlorophyll catabolic process3.88E-03
96GO:0010043: response to zinc ion3.95E-03
97GO:0010119: regulation of stomatal movement3.95E-03
98GO:0046685: response to arsenic-containing substance4.40E-03
99GO:0009821: alkaloid biosynthetic process4.40E-03
100GO:0006098: pentose-phosphate shunt4.40E-03
101GO:0006754: ATP biosynthetic process4.40E-03
102GO:0090332: stomatal closure4.93E-03
103GO:0048354: mucilage biosynthetic process involved in seed coat development4.93E-03
104GO:0009414: response to water deprivation4.96E-03
105GO:0071555: cell wall organization5.17E-03
106GO:0010192: mucilage biosynthetic process5.48E-03
107GO:0048229: gametophyte development6.06E-03
108GO:0072593: reactive oxygen species metabolic process6.06E-03
109GO:0052544: defense response by callose deposition in cell wall6.06E-03
110GO:0006790: sulfur compound metabolic process6.66E-03
111GO:0006807: nitrogen compound metabolic process7.28E-03
112GO:0009725: response to hormone7.28E-03
113GO:0006094: gluconeogenesis7.28E-03
114GO:0006108: malate metabolic process7.28E-03
115GO:0009266: response to temperature stimulus7.91E-03
116GO:0002237: response to molecule of bacterial origin7.91E-03
117GO:0046854: phosphatidylinositol phosphorylation8.57E-03
118GO:0019853: L-ascorbic acid biosynthetic process8.57E-03
119GO:0090351: seedling development8.57E-03
120GO:0055085: transmembrane transport9.00E-03
121GO:0019762: glucosinolate catabolic process9.25E-03
122GO:0042753: positive regulation of circadian rhythm9.25E-03
123GO:0006636: unsaturated fatty acid biosynthetic process9.25E-03
124GO:0009626: plant-type hypersensitive response9.46E-03
125GO:0009624: response to nematode1.07E-02
126GO:0015992: proton transport1.14E-02
127GO:0006366: transcription from RNA polymerase II promoter1.14E-02
128GO:0003333: amino acid transmembrane transport1.14E-02
129GO:0016042: lipid catabolic process1.17E-02
130GO:0019748: secondary metabolic process1.21E-02
131GO:0016226: iron-sulfur cluster assembly1.21E-02
132GO:0035428: hexose transmembrane transport1.21E-02
133GO:0009625: response to insect1.29E-02
134GO:0006012: galactose metabolic process1.29E-02
135GO:0010051: xylem and phloem pattern formation1.53E-02
136GO:0010118: stomatal movement1.53E-02
137GO:0042744: hydrogen peroxide catabolic process1.53E-02
138GO:0015991: ATP hydrolysis coupled proton transport1.53E-02
139GO:0048653: anther development1.53E-02
140GO:0042335: cuticle development1.53E-02
141GO:0042391: regulation of membrane potential1.53E-02
142GO:0010182: sugar mediated signaling pathway1.62E-02
143GO:0046323: glucose import1.62E-02
144GO:0010154: fruit development1.62E-02
145GO:0006662: glycerol ether metabolic process1.62E-02
146GO:0015986: ATP synthesis coupled proton transport1.70E-02
147GO:0008654: phospholipid biosynthetic process1.79E-02
148GO:0019252: starch biosynthetic process1.79E-02
149GO:0042742: defense response to bacterium1.82E-02
150GO:0006979: response to oxidative stress1.84E-02
151GO:0016132: brassinosteroid biosynthetic process1.88E-02
152GO:0030163: protein catabolic process2.06E-02
153GO:0016125: sterol metabolic process2.15E-02
154GO:0010252: auxin homeostasis2.15E-02
155GO:0009615: response to virus2.44E-02
156GO:0016126: sterol biosynthetic process2.44E-02
157GO:0009627: systemic acquired resistance2.64E-02
158GO:0042128: nitrate assimilation2.64E-02
159GO:0048573: photoperiodism, flowering2.74E-02
160GO:0008219: cell death2.95E-02
161GO:0009817: defense response to fungus, incompatible interaction2.95E-02
162GO:0048767: root hair elongation3.05E-02
163GO:0009813: flavonoid biosynthetic process3.05E-02
164GO:0009407: toxin catabolic process3.16E-02
165GO:0006810: transport3.21E-02
166GO:0007568: aging3.27E-02
167GO:0006865: amino acid transport3.38E-02
168GO:0009853: photorespiration3.49E-02
169GO:0034599: cellular response to oxidative stress3.60E-02
170GO:0006511: ubiquitin-dependent protein catabolic process3.66E-02
171GO:0042542: response to hydrogen peroxide4.06E-02
172GO:0045454: cell redox homeostasis4.25E-02
173GO:0031347: regulation of defense response4.78E-02
174GO:0042538: hyperosmotic salinity response4.90E-02
RankGO TermAdjusted P value
1GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
2GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
3GO:0050505: hydroquinone glucosyltransferase activity0.00E+00
4GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
5GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
6GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity0.00E+00
7GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
8GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
9GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
10GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
11GO:0008734: L-aspartate oxidase activity0.00E+00
12GO:0048244: phytanoyl-CoA dioxygenase activity0.00E+00
13GO:0032441: pheophorbide a oxygenase activity0.00E+00
14GO:0009045: xylose isomerase activity0.00E+00
15GO:0015391: nucleobase:cation symporter activity0.00E+00
16GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity0.00E+00
17GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
18GO:0010176: homogentisate phytyltransferase activity0.00E+00
19GO:0015205: nucleobase transmembrane transporter activity0.00E+00
20GO:0004151: dihydroorotase activity0.00E+00
21GO:0005507: copper ion binding3.07E-07
22GO:0080109: indole-3-acetonitrile nitrile hydratase activity1.74E-06
23GO:0052692: raffinose alpha-galactosidase activity6.40E-06
24GO:0004557: alpha-galactosidase activity6.40E-06
25GO:0080061: indole-3-acetonitrile nitrilase activity6.40E-06
26GO:0008559: xenobiotic-transporting ATPase activity1.23E-05
27GO:0000257: nitrilase activity1.47E-05
28GO:0016788: hydrolase activity, acting on ester bonds2.07E-05
29GO:0004867: serine-type endopeptidase inhibitor activity2.89E-05
30GO:0004298: threonine-type endopeptidase activity5.59E-05
31GO:0090448: glucosinolate:proton symporter activity1.91E-04
32GO:0000248: C-5 sterol desaturase activity1.91E-04
33GO:0016229: steroid dehydrogenase activity1.91E-04
34GO:0080048: GDP-D-glucose phosphorylase activity1.91E-04
35GO:0004347: glucose-6-phosphate isomerase activity1.91E-04
36GO:0003987: acetate-CoA ligase activity1.91E-04
37GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity1.91E-04
38GO:0080047: GDP-L-galactose phosphorylase activity1.91E-04
39GO:0045437: uridine nucleosidase activity1.91E-04
40GO:0047760: butyrate-CoA ligase activity1.91E-04
41GO:0001530: lipopolysaccharide binding1.91E-04
42GO:0016780: phosphotransferase activity, for other substituted phosphate groups1.91E-04
43GO:0070401: NADP+ binding1.91E-04
44GO:0071992: phytochelatin transmembrane transporter activity1.91E-04
45GO:0004307: ethanolaminephosphotransferase activity1.91E-04
46GO:0015185: gamma-aminobutyric acid transmembrane transporter activity1.91E-04
47GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.91E-04
48GO:0009671: nitrate:proton symporter activity1.91E-04
49GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1.91E-04
50GO:0004362: glutathione-disulfide reductase activity4.29E-04
51GO:0004566: beta-glucuronidase activity4.29E-04
52GO:0004617: phosphoglycerate dehydrogenase activity4.29E-04
53GO:0004047: aminomethyltransferase activity4.29E-04
54GO:0003994: aconitate hydratase activity4.29E-04
55GO:0047724: inosine nucleosidase activity4.29E-04
56GO:0047517: 1,4-beta-D-xylan synthase activity4.29E-04
57GO:0004340: glucokinase activity4.29E-04
58GO:0004614: phosphoglucomutase activity4.29E-04
59GO:0030572: phosphatidyltransferase activity4.29E-04
60GO:0004142: diacylglycerol cholinephosphotransferase activity4.29E-04
61GO:0005366: myo-inositol:proton symporter activity4.29E-04
62GO:0008517: folic acid transporter activity4.29E-04
63GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity6.99E-04
64GO:0010277: chlorophyllide a oxygenase [overall] activity6.99E-04
65GO:0035251: UDP-glucosyltransferase activity9.21E-04
66GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity9.97E-04
67GO:0016298: lipase activity1.08E-03
68GO:0016760: cellulose synthase (UDP-forming) activity1.09E-03
69GO:0004301: epoxide hydrolase activity1.32E-03
70GO:0004659: prenyltransferase activity1.32E-03
71GO:0004396: hexokinase activity1.32E-03
72GO:0019158: mannokinase activity1.32E-03
73GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.32E-03
74GO:0080032: methyl jasmonate esterase activity1.32E-03
75GO:0009044: xylan 1,4-beta-xylosidase activity1.32E-03
76GO:0050302: indole-3-acetaldehyde oxidase activity1.32E-03
77GO:0005253: anion channel activity1.32E-03
78GO:0005536: glucose binding1.32E-03
79GO:0008233: peptidase activity1.41E-03
80GO:0022857: transmembrane transporter activity1.50E-03
81GO:0046872: metal ion binding1.64E-03
82GO:0004356: glutamate-ammonia ligase activity1.68E-03
83GO:0008177: succinate dehydrogenase (ubiquinone) activity1.68E-03
84GO:0052689: carboxylic ester hydrolase activity1.69E-03
85GO:0004197: cysteine-type endopeptidase activity1.95E-03
86GO:0016615: malate dehydrogenase activity2.07E-03
87GO:0004866: endopeptidase inhibitor activity2.07E-03
88GO:0008200: ion channel inhibitor activity2.07E-03
89GO:0005247: voltage-gated chloride channel activity2.07E-03
90GO:0080046: quercetin 4'-O-glucosyltransferase activity2.07E-03
91GO:0080030: methyl indole-3-acetate esterase activity2.07E-03
92GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.07E-03
93GO:0016208: AMP binding2.07E-03
94GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.07E-03
95GO:0016759: cellulose synthase activity2.21E-03
96GO:0030170: pyridoxal phosphate binding2.45E-03
97GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.49E-03
98GO:0030060: L-malate dehydrogenase activity2.49E-03
99GO:0005261: cation channel activity2.49E-03
100GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.49E-03
101GO:0005085: guanyl-nucleotide exchange factor activity2.93E-03
102GO:0005516: calmodulin binding3.07E-03
103GO:0004034: aldose 1-epimerase activity3.40E-03
104GO:0004033: aldo-keto reductase (NADP) activity3.40E-03
105GO:0004869: cysteine-type endopeptidase inhibitor activity3.40E-03
106GO:0008865: fructokinase activity3.40E-03
107GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.33E-03
108GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.37E-03
109GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism4.40E-03
110GO:0050661: NADP binding4.92E-03
111GO:0016844: strictosidine synthase activity4.93E-03
112GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.93E-03
113GO:0051287: NAD binding6.74E-03
114GO:0031072: heat shock protein binding7.28E-03
115GO:0004022: alcohol dehydrogenase (NAD) activity7.28E-03
116GO:0008266: poly(U) RNA binding7.91E-03
117GO:0008234: cysteine-type peptidase activity8.31E-03
118GO:0015171: amino acid transmembrane transporter activity8.31E-03
119GO:0016491: oxidoreductase activity8.35E-03
120GO:0016740: transferase activity8.48E-03
121GO:0004190: aspartic-type endopeptidase activity8.57E-03
122GO:0030552: cAMP binding8.57E-03
123GO:0030553: cGMP binding8.57E-03
124GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups9.17E-03
125GO:0051536: iron-sulfur cluster binding9.94E-03
126GO:0031418: L-ascorbic acid binding9.94E-03
127GO:0001046: core promoter sequence-specific DNA binding9.94E-03
128GO:0008270: zinc ion binding1.03E-02
129GO:0005216: ion channel activity1.07E-02
130GO:0008324: cation transmembrane transporter activity1.07E-02
131GO:0047134: protein-disulfide reductase activity1.45E-02
132GO:0005249: voltage-gated potassium channel activity1.53E-02
133GO:0030551: cyclic nucleotide binding1.53E-02
134GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.62E-02
135GO:0004791: thioredoxin-disulfide reductase activity1.70E-02
136GO:0005355: glucose transmembrane transporter activity1.70E-02
137GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.06E-02
138GO:0008194: UDP-glycosyltransferase activity2.08E-02
139GO:0008483: transaminase activity2.25E-02
140GO:0016597: amino acid binding2.34E-02
141GO:0051213: dioxygenase activity2.44E-02
142GO:0009931: calcium-dependent protein serine/threonine kinase activity2.64E-02
143GO:0004683: calmodulin-dependent protein kinase activity2.74E-02
144GO:0016798: hydrolase activity, acting on glycosyl bonds2.74E-02
145GO:0102483: scopolin beta-glucosidase activity2.74E-02
146GO:0000287: magnesium ion binding2.82E-02
147GO:0004601: peroxidase activity2.87E-02
148GO:0015238: drug transmembrane transporter activity3.05E-02
149GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.27E-02
150GO:0050897: cobalt ion binding3.27E-02
151GO:0050660: flavin adenine dinucleotide binding3.32E-02
152GO:0020037: heme binding3.56E-02
153GO:0004497: monooxygenase activity3.56E-02
154GO:0008422: beta-glucosidase activity3.71E-02
155GO:0051539: 4 iron, 4 sulfur cluster binding3.83E-02
156GO:0004364: glutathione transferase activity4.06E-02
157GO:0016757: transferase activity, transferring glycosyl groups4.17E-02
158GO:0004185: serine-type carboxypeptidase activity4.18E-02
159GO:0051537: 2 iron, 2 sulfur cluster binding4.41E-02
RankGO TermAdjusted P value
1GO:0005773: vacuole1.14E-09
2GO:0005759: mitochondrial matrix4.33E-06
3GO:0005774: vacuolar membrane9.17E-06
4GO:0005829: cytosol3.72E-05
5GO:0005839: proteasome core complex5.59E-05
6GO:0005777: peroxisome4.57E-04
7GO:0000325: plant-type vacuole4.64E-04
8GO:0005578: proteinaceous extracellular matrix4.93E-04
9GO:0005764: lysosome5.55E-04
10GO:0048046: apoplast7.25E-04
11GO:0000502: proteasome complex1.04E-03
12GO:0005886: plasma membrane1.07E-03
13GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.32E-03
14GO:0009526: plastid envelope1.32E-03
15GO:0005576: extracellular region1.34E-03
16GO:0034707: chloride channel complex2.07E-03
17GO:0010168: ER body2.07E-03
18GO:0009705: plant-type vacuole membrane3.22E-03
19GO:0016020: membrane3.24E-03
20GO:0005615: extracellular space3.72E-03
21GO:0019773: proteasome core complex, alpha-subunit complex3.88E-03
22GO:0010494: cytoplasmic stress granule4.40E-03
23GO:0005765: lysosomal membrane6.06E-03
24GO:0031966: mitochondrial membrane6.99E-03
25GO:0031012: extracellular matrix7.28E-03
26GO:0005794: Golgi apparatus8.29E-03
27GO:0005753: mitochondrial proton-transporting ATP synthase complex8.57E-03
28GO:0005747: mitochondrial respiratory chain complex I9.17E-03
29GO:0005783: endoplasmic reticulum1.00E-02
30GO:0045271: respiratory chain complex I1.07E-02
31GO:0005741: mitochondrial outer membrane1.14E-02
32GO:0005737: cytoplasm1.26E-02
33GO:0005618: cell wall2.07E-02
34GO:0010319: stromule2.25E-02
35GO:0000932: P-body2.44E-02
36GO:0016021: integral component of membrane3.32E-02
37GO:0031969: chloroplast membrane3.56E-02
38GO:0090406: pollen tube4.18E-02
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Gene type



Gene DE type