co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0097237: cellular response to toxic substance	0.00E+00
4	GO:0006862: nucleotide transport	0.00E+00
5	GO:2001142: nicotinate transport	0.00E+00
6	GO:0009268: response to pH	0.00E+00
7	GO:0071669: plant-type cell wall organization or biogenesis	2.60E-05
8	GO:0045010: actin nucleation	3.42E-05
9	GO:0009966: regulation of signal transduction	7.23E-05
10	GO:0007229: integrin-mediated signaling pathway	7.23E-05
11	GO:0080157: regulation of plant-type cell wall organization or biogenesis	7.23E-05
12	GO:1903507: negative regulation of nucleic acid-templated transcription	9.43E-05
13	GO:0006468: protein phosphorylation	1.28E-04
14	GO:0009611: response to wounding	1.34E-04
15	GO:0046939: nucleotide phosphorylation	1.74E-04
16	GO:0002221: pattern recognition receptor signaling pathway	1.74E-04
17	GO:0010200: response to chitin	1.94E-04
18	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.78E-04
19	GO:0009753: response to jasmonic acid	3.87E-04
20	GO:0000271: polysaccharide biosynthetic process	3.89E-04
21	GO:0009399: nitrogen fixation	4.23E-04
22	GO:0002679: respiratory burst involved in defense response	4.23E-04
23	GO:0033014: tetrapyrrole biosynthetic process	4.23E-04
24	GO:0045227: capsule polysaccharide biosynthetic process	5.65E-04
25	GO:0033358: UDP-L-arabinose biosynthetic process	5.65E-04
26	GO:0030041: actin filament polymerization	7.14E-04
27	GO:0015691: cadmium ion transport	8.73E-04
28	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	8.73E-04
29	GO:0048317: seed morphogenesis	8.73E-04
30	GO:0006828: manganese ion transport	8.73E-04
31	GO:0030244: cellulose biosynthetic process	9.46E-04
32	GO:0009832: plant-type cell wall biogenesis	9.91E-04
33	GO:0009651: response to salt stress	1.08E-03
34	GO:0006839: mitochondrial transport	1.34E-03
35	GO:0046777: protein autophosphorylation	1.50E-03
36	GO:0009699: phenylpropanoid biosynthetic process	1.59E-03
37	GO:0009932: cell tip growth	1.59E-03
38	GO:0051865: protein autoubiquitination	1.80E-03
39	GO:0006783: heme biosynthetic process	1.80E-03
40	GO:0031347: regulation of defense response	1.82E-03
41	GO:0006779: porphyrin-containing compound biosynthetic process	2.01E-03
42	GO:0009086: methionine biosynthetic process	2.01E-03
43	GO:0008202: steroid metabolic process	2.01E-03
44	GO:0010215: cellulose microfibril organization	2.23E-03
45	GO:0006782: protoporphyrinogen IX biosynthetic process	2.23E-03
46	GO:0048829: root cap development	2.23E-03
47	GO:0009414: response to water deprivation	2.32E-03
48	GO:0006816: calcium ion transport	2.46E-03
49	GO:0000266: mitochondrial fission	2.70E-03
50	GO:0010152: pollen maturation	2.70E-03
51	GO:0018107: peptidyl-threonine phosphorylation	2.94E-03
52	GO:0034605: cellular response to heat	3.19E-03
53	GO:0046854: phosphatidylinositol phosphorylation	3.44E-03
54	GO:0009225: nucleotide-sugar metabolic process	3.44E-03
55	GO:0009409: response to cold	3.82E-03
56	GO:0009695: jasmonic acid biosynthetic process	4.26E-03
57	GO:0016998: cell wall macromolecule catabolic process	4.54E-03
58	GO:0007005: mitochondrion organization	4.83E-03
59	GO:0006012: galactose metabolic process	5.13E-03
60	GO:0006817: phosphate ion transport	5.43E-03
61	GO:0009306: protein secretion	5.43E-03
62	GO:0007166: cell surface receptor signaling pathway	5.61E-03
63	GO:0009617: response to bacterium	5.86E-03
64	GO:0055085: transmembrane transport	6.27E-03
65	GO:0009960: endosperm development	6.38E-03
66	GO:0048544: recognition of pollen	6.70E-03
67	GO:0009737: response to abscisic acid	7.59E-03
68	GO:0010583: response to cyclopentenone	7.72E-03
69	GO:0006970: response to osmotic stress	8.18E-03
70	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.74E-03
71	GO:0006952: defense response	9.86E-03
72	GO:0009607: response to biotic stimulus	9.92E-03
73	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.92E-03
74	GO:0009816: defense response to bacterium, incompatible interaction	9.92E-03
75	GO:0015995: chlorophyll biosynthetic process	1.07E-02
76	GO:0016049: cell growth	1.11E-02
77	GO:0071555: cell wall organization	1.13E-02
78	GO:0042742: defense response to bacterium	1.13E-02
79	GO:0006979: response to oxidative stress	1.15E-02
80	GO:0008219: cell death	1.15E-02
81	GO:0048767: root hair elongation	1.19E-02
82	GO:0009813: flavonoid biosynthetic process	1.19E-02
83	GO:0010311: lateral root formation	1.19E-02
84	GO:0009867: jasmonic acid mediated signaling pathway	1.36E-02
85	GO:0045087: innate immune response	1.36E-02
86	GO:0030001: metal ion transport	1.49E-02
87	GO:0006810: transport	1.85E-02
88	GO:0009809: lignin biosynthetic process	2.01E-02
89	GO:0009620: response to fungus	2.42E-02
90	GO:0035556: intracellular signal transduction	2.62E-02
91	GO:0018105: peptidyl-serine phosphorylation	2.64E-02
92	GO:0009742: brassinosteroid mediated signaling pathway	2.69E-02
93	GO:0045893: positive regulation of transcription, DNA-templated	2.84E-02
94	GO:0009845: seed germination	3.20E-02
95	GO:0016567: protein ubiquitination	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0090416: nicotinate transporter activity	0.00E+00
2	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
3	GO:0005522: profilin binding	0.00E+00
4	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
5	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
6	GO:0004672: protein kinase activity	2.92E-06
7	GO:0051753: mannan synthase activity	1.91E-05
8	GO:0047150: betaine-homocysteine S-methyltransferase activity	7.23E-05
9	GO:0016301: kinase activity	9.85E-05
10	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	1.74E-04
11	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.74E-04
12	GO:0008883: glutamyl-tRNA reductase activity	1.74E-04
13	GO:0003714: transcription corepressor activity	2.07E-04
14	GO:0046423: allene-oxide cyclase activity	2.93E-04
15	GO:0016760: cellulose synthase (UDP-forming) activity	3.04E-04
16	GO:0019201: nucleotide kinase activity	4.23E-04
17	GO:0015368: calcium:cation antiporter activity	5.65E-04
18	GO:0050373: UDP-arabinose 4-epimerase activity	5.65E-04
19	GO:0015369: calcium:proton antiporter activity	5.65E-04
20	GO:0043015: gamma-tubulin binding	5.65E-04
21	GO:0016759: cellulose synthase activity	6.19E-04
22	GO:0004674: protein serine/threonine kinase activity	6.36E-04
23	GO:0004356: glutamate-ammonia ligase activity	7.14E-04
24	GO:0003978: UDP-glucose 4-epimerase activity	1.04E-03
25	GO:0004017: adenylate kinase activity	1.04E-03
26	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.29E-03
27	GO:0052747: sinapyl alcohol dehydrogenase activity	1.40E-03
28	GO:0008142: oxysterol binding	1.59E-03
29	GO:0004430: 1-phosphatidylinositol 4-kinase activity	1.59E-03
30	GO:0016207: 4-coumarate-CoA ligase activity	1.80E-03
31	GO:0047617: acyl-CoA hydrolase activity	2.01E-03
32	GO:0005524: ATP binding	2.48E-03
33	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.70E-03
34	GO:0003779: actin binding	2.78E-03
35	GO:0019888: protein phosphatase regulator activity	2.94E-03
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.19E-03
37	GO:0016757: transferase activity, transferring glycosyl groups	4.21E-03
38	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.58E-03
39	GO:0022891: substrate-specific transmembrane transporter activity	5.13E-03
40	GO:0008017: microtubule binding	5.14E-03
41	GO:0016853: isomerase activity	6.70E-03
42	GO:0051015: actin filament binding	8.07E-03
43	GO:0016722: oxidoreductase activity, oxidizing metal ions	8.79E-03
44	GO:0051213: dioxygenase activity	9.54E-03
45	GO:0008375: acetylglucosaminyltransferase activity	1.03E-02
46	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.15E-02
47	GO:0050661: NADP binding	1.49E-02
48	GO:0051539: 4 iron, 4 sulfur cluster binding	1.49E-02
49	GO:0004842: ubiquitin-protein transferase activity	1.71E-02
50	GO:0043621: protein self-association	1.72E-02
51	GO:0035091: phosphatidylinositol binding	1.72E-02
52	GO:0016298: lipase activity	2.06E-02
53	GO:0016874: ligase activity	2.47E-02
54	GO:0022857: transmembrane transporter activity	2.47E-02
55	GO:0043565: sequence-specific DNA binding	2.82E-02
56	GO:0015144: carbohydrate transmembrane transporter activity	3.44E-02
57	GO:0005351: sugar:proton symporter activity	3.75E-02
58	GO:0005525: GTP binding	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.30E-06
2	GO:0005911: cell-cell junction	7.23E-05
3	GO:0019008: molybdopterin synthase complex	7.23E-05
4	GO:0009524: phragmoplast	4.38E-04
5	GO:0030173: integral component of Golgi membrane	1.04E-03
6	GO:0005794: Golgi apparatus	1.29E-03
7	GO:0005802: trans-Golgi network	1.69E-03
8	GO:0005768: endosome	2.05E-03
9	GO:0005938: cell cortex	2.94E-03
10	GO:0030136: clathrin-coated vesicle	5.74E-03
11	GO:0046658: anchored component of plasma membrane	6.49E-03
12	GO:0009504: cell plate	7.04E-03
13	GO:0016592: mediator complex	7.72E-03
14	GO:0032580: Golgi cisterna membrane	8.43E-03
15	GO:0005743: mitochondrial inner membrane	1.29E-02
16	GO:0090406: pollen tube	1.63E-02
17	GO:0005618: cell wall	1.93E-02
18	GO:0005737: cytoplasm	2.03E-02
19	GO:0012505: endomembrane system	2.53E-02
20	GO:0009706: chloroplast inner membrane	2.58E-02
21	GO:0016021: integral component of membrane	3.19E-02
22	GO:0005759: mitochondrial matrix	3.56E-02
23	GO:0009705: plant-type vacuole membrane	3.81E-02