co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01755

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007037: vacuolar phosphate transport	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
4	GO:0006907: pinocytosis	0.00E+00
5	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
6	GO:0016123: xanthophyll biosynthetic process	4.82E-05
7	GO:0010190: cytochrome b6f complex assembly	7.11E-05
8	GO:0042371: vitamin K biosynthetic process	2.02E-04
9	GO:0071454: cellular response to anoxia	2.02E-04
10	GO:0048438: floral whorl development	2.02E-04
11	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	4.52E-04
12	GO:1900871: chloroplast mRNA modification	4.52E-04
13	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.52E-04
14	GO:0080153: negative regulation of reductive pentose-phosphate cycle	4.52E-04
15	GO:0010275: NAD(P)H dehydrogenase complex assembly	4.52E-04
16	GO:0009451: RNA modification	6.37E-04
17	GO:0001578: microtubule bundle formation	7.36E-04
18	GO:0090307: mitotic spindle assembly	1.05E-03
19	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	1.05E-03
20	GO:0033014: tetrapyrrole biosynthetic process	1.05E-03
21	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.05E-03
22	GO:0007020: microtubule nucleation	1.40E-03
23	GO:0031122: cytoplasmic microtubule organization	1.40E-03
24	GO:0071483: cellular response to blue light	1.40E-03
25	GO:0042274: ribosomal small subunit biogenesis	1.40E-03
26	GO:0051322: anaphase	1.40E-03
27	GO:0031935: regulation of chromatin silencing	1.40E-03
28	GO:0009765: photosynthesis, light harvesting	1.40E-03
29	GO:0009958: positive gravitropism	1.61E-03
30	GO:0016120: carotene biosynthetic process	1.78E-03
31	GO:0046785: microtubule polymerization	1.78E-03
32	GO:0000741: karyogamy	2.19E-03
33	GO:0009959: negative gravitropism	2.19E-03
34	GO:0010076: maintenance of floral meristem identity	2.63E-03
35	GO:0017148: negative regulation of translation	2.63E-03
36	GO:0000910: cytokinesis	2.69E-03
37	GO:0016126: sterol biosynthetic process	2.85E-03
38	GO:0010196: nonphotochemical quenching	3.09E-03
39	GO:0080111: DNA demethylation	3.09E-03
40	GO:0048528: post-embryonic root development	3.09E-03
41	GO:0009772: photosynthetic electron transport in photosystem II	3.09E-03
42	GO:1900056: negative regulation of leaf senescence	3.09E-03
43	GO:0042255: ribosome assembly	3.59E-03
44	GO:0006353: DNA-templated transcription, termination	3.59E-03
45	GO:0009704: de-etiolation	3.59E-03
46	GO:0010928: regulation of auxin mediated signaling pathway	3.59E-03
47	GO:0071482: cellular response to light stimulus	4.10E-03
48	GO:0022900: electron transport chain	4.10E-03
49	GO:0009910: negative regulation of flower development	4.28E-03
50	GO:0006098: pentose-phosphate shunt	4.65E-03
51	GO:0006783: heme biosynthetic process	4.65E-03
52	GO:0010112: regulation of systemic acquired resistance	4.65E-03
53	GO:0009245: lipid A biosynthetic process	4.65E-03
54	GO:1900865: chloroplast RNA modification	5.21E-03
55	GO:0010380: regulation of chlorophyll biosynthetic process	5.21E-03
56	GO:0006779: porphyrin-containing compound biosynthetic process	5.21E-03
57	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.80E-03
58	GO:0006535: cysteine biosynthetic process from serine	5.80E-03
59	GO:0045036: protein targeting to chloroplast	5.80E-03
60	GO:0009744: response to sucrose	6.04E-03
61	GO:0009658: chloroplast organization	6.22E-03
62	GO:0009773: photosynthetic electron transport in photosystem I	6.41E-03
63	GO:0006352: DNA-templated transcription, initiation	6.41E-03
64	GO:0045037: protein import into chloroplast stroma	7.04E-03
65	GO:0010582: floral meristem determinacy	7.04E-03
66	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.04E-03
67	GO:0009725: response to hormone	7.70E-03
68	GO:0006094: gluconeogenesis	7.70E-03
69	GO:0009767: photosynthetic electron transport chain	7.70E-03
70	GO:0019253: reductive pentose-phosphate cycle	8.37E-03
71	GO:0010207: photosystem II assembly	8.37E-03
72	GO:0009266: response to temperature stimulus	8.37E-03
73	GO:0034605: cellular response to heat	8.37E-03
74	GO:0090351: seedling development	9.07E-03
75	GO:0006863: purine nucleobase transport	9.79E-03
76	GO:0007010: cytoskeleton organization	1.05E-02
77	GO:0006289: nucleotide-excision repair	1.05E-02
78	GO:0019344: cysteine biosynthetic process	1.05E-02
79	GO:0043622: cortical microtubule organization	1.13E-02
80	GO:0007017: microtubule-based process	1.13E-02
81	GO:0080092: regulation of pollen tube growth	1.29E-02
82	GO:0070417: cellular response to cold	1.54E-02
83	GO:0016117: carotenoid biosynthetic process	1.54E-02
84	GO:0008033: tRNA processing	1.62E-02
85	GO:0010197: polar nucleus fusion	1.71E-02
86	GO:0048868: pollen tube development	1.71E-02
87	GO:0006342: chromatin silencing	1.71E-02
88	GO:0015986: ATP synthesis coupled proton transport	1.80E-02
89	GO:0007018: microtubule-based movement	1.80E-02
90	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.99E-02
91	GO:0010193: response to ozone	1.99E-02
92	GO:0016032: viral process	2.08E-02
93	GO:0032502: developmental process	2.08E-02
94	GO:0007264: small GTPase mediated signal transduction	2.08E-02
95	GO:0009639: response to red or far red light	2.28E-02
96	GO:0006464: cellular protein modification process	2.28E-02
97	GO:0009793: embryo development ending in seed dormancy	2.52E-02
98	GO:0001666: response to hypoxia	2.58E-02
99	GO:0000160: phosphorelay signal transduction system	3.23E-02
100	GO:0006811: ion transport	3.35E-02
101	GO:0015979: photosynthesis	4.40E-02
102	GO:0008283: cell proliferation	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:1990534: thermospermine oxidase activity	0.00E+00
5	GO:0004325: ferrochelatase activity	2.02E-04
6	GO:0050017: L-3-cyanoalanine synthase activity	4.52E-04
7	GO:0017118: lipoyltransferase activity	4.52E-04
8	GO:0008017: microtubule binding	6.59E-04
9	GO:0004848: ureidoglycolate hydrolase activity	7.36E-04
10	GO:0019003: GDP binding	7.36E-04
11	GO:0000900: translation repressor activity, nucleic acid binding	7.36E-04
12	GO:0043023: ribosomal large subunit binding	1.05E-03
13	GO:0000254: C-4 methylsterol oxidase activity	1.05E-03
14	GO:0003690: double-stranded DNA binding	1.20E-03
15	GO:0003777: microtubule motor activity	1.30E-03
16	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.40E-03
17	GO:0001053: plastid sigma factor activity	1.40E-03
18	GO:0016987: sigma factor activity	1.40E-03
19	GO:0043015: gamma-tubulin binding	1.40E-03
20	GO:0008374: O-acyltransferase activity	1.78E-03
21	GO:0051011: microtubule minus-end binding	1.78E-03
22	GO:0031177: phosphopantetheine binding	2.19E-03
23	GO:0004332: fructose-bisphosphate aldolase activity	2.19E-03
24	GO:0015631: tubulin binding	2.63E-03
25	GO:0000035: acyl binding	2.63E-03
26	GO:0004124: cysteine synthase activity	2.63E-03
27	GO:0016491: oxidoreductase activity	2.86E-03
28	GO:0004519: endonuclease activity	3.37E-03
29	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.59E-03
30	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.41E-03
31	GO:0008131: primary amine oxidase activity	8.37E-03
32	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.37E-03
33	GO:0016740: transferase activity	9.59E-03
34	GO:0003887: DNA-directed DNA polymerase activity	9.79E-03
35	GO:0005345: purine nucleobase transmembrane transporter activity	1.13E-02
36	GO:0003727: single-stranded RNA binding	1.45E-02
37	GO:0019843: rRNA binding	1.46E-02
38	GO:0003723: RNA binding	1.56E-02
39	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.71E-02
40	GO:0010181: FMN binding	1.80E-02
41	GO:0004872: receptor activity	1.89E-02
42	GO:0048038: quinone binding	1.99E-02
43	GO:0004518: nuclease activity	2.08E-02
44	GO:0000156: phosphorelay response regulator activity	2.18E-02
45	GO:0008483: transaminase activity	2.38E-02
46	GO:0005200: structural constituent of cytoskeleton	2.38E-02
47	GO:0004601: peroxidase activity	3.12E-02
48	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.93E-02
49	GO:0003674: molecular_function	3.99E-02
50	GO:0051537: 2 iron, 2 sulfur cluster binding	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0030427: site of polarized growth	0.00E+00
2	GO:0009507: chloroplast	2.99E-08
3	GO:0009535: chloroplast thylakoid membrane	1.07E-05
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.53E-04
5	GO:0005874: microtubule	2.93E-04
6	GO:0008274: gamma-tubulin ring complex	4.52E-04
7	GO:0005819: spindle	6.45E-04
8	GO:0042651: thylakoid membrane	9.08E-04
9	GO:0000923: equatorial microtubule organizing center	1.05E-03
10	GO:0030286: dynein complex	1.40E-03
11	GO:0055035: plastid thylakoid membrane	1.78E-03
12	GO:0072686: mitotic spindle	1.78E-03
13	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.19E-03
14	GO:0010005: cortical microtubule, transverse to long axis	2.63E-03
15	GO:0009840: chloroplastic endopeptidase Clp complex	2.63E-03
16	GO:0000123: histone acetyltransferase complex	3.09E-03
17	GO:0046930: pore complex	4.10E-03
18	GO:0000922: spindle pole	4.65E-03
19	GO:0016324: apical plasma membrane	5.80E-03
20	GO:0055028: cortical microtubule	5.80E-03
21	GO:0005938: cell cortex	7.70E-03
22	GO:0009574: preprophase band	7.70E-03
23	GO:0030095: chloroplast photosystem II	8.37E-03
24	GO:0043234: protein complex	9.79E-03
25	GO:0005875: microtubule associated complex	9.79E-03
26	GO:0009570: chloroplast stroma	1.05E-02
27	GO:0009654: photosystem II oxygen evolving complex	1.13E-02
28	GO:0009706: chloroplast inner membrane	1.16E-02
29	GO:0015935: small ribosomal subunit	1.21E-02
30	GO:0009543: chloroplast thylakoid lumen	1.46E-02
31	GO:0005623: cell	1.50E-02
32	GO:0043231: intracellular membrane-bounded organelle	1.52E-02
33	GO:0005871: kinesin complex	1.54E-02
34	GO:0000790: nuclear chromatin	1.54E-02
35	GO:0019898: extrinsic component of membrane	1.89E-02
36	GO:0010319: stromule	2.38E-02
37	GO:0009579: thylakoid	3.46E-02
38	GO:0000786: nucleosome	3.58E-02
39	GO:0031969: chloroplast membrane	3.86E-02
40	GO:0031225: anchored component of membrane	4.78E-02