co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006627: protein processing involved in protein targeting to mitochondrion	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0006412: translation	9.34E-13
4	GO:0009735: response to cytokinin	1.46E-10
5	GO:0006820: anion transport	6.87E-07
6	GO:0009060: aerobic respiration	3.12E-05
7	GO:0098656: anion transmembrane transport	3.12E-05
8	GO:0006407: rRNA export from nucleus	5.03E-05
9	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	5.03E-05
10	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	5.03E-05
11	GO:1990069: stomatal opening	1.23E-04
12	GO:0006487: protein N-linked glycosylation	1.25E-04
13	GO:0042256: mature ribosome assembly	2.11E-04
14	GO:0010483: pollen tube reception	4.15E-04
15	GO:0009617: response to bacterium	4.21E-04
16	GO:0018279: protein N-linked glycosylation via asparagine	5.26E-04
17	GO:0006564: L-serine biosynthetic process	5.26E-04
18	GO:0036065: fucosylation	5.26E-04
19	GO:0042254: ribosome biogenesis	5.99E-04
20	GO:0009648: photoperiodism	7.68E-04
21	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	8.97E-04
22	GO:0042773: ATP synthesis coupled electron transport	8.97E-04
23	GO:0000028: ribosomal small subunit assembly	1.03E-03
24	GO:0050821: protein stabilization	1.03E-03
25	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.03E-03
26	GO:0010417: glucuronoxylan biosynthetic process	1.17E-03
27	GO:0006754: ATP biosynthetic process	1.32E-03
28	GO:0043067: regulation of programmed cell death	1.47E-03
29	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.47E-03
30	GO:0009626: plant-type hypersensitive response	1.59E-03
31	GO:0016485: protein processing	1.79E-03
32	GO:0006626: protein targeting to mitochondrion	2.14E-03
33	GO:0002237: response to molecule of bacterial origin	2.32E-03
34	GO:0009969: xyloglucan biosynthetic process	2.50E-03
35	GO:0034976: response to endoplasmic reticulum stress	2.69E-03
36	GO:0006413: translational initiation	2.87E-03
37	GO:0030150: protein import into mitochondrial matrix	2.88E-03
38	GO:0015992: proton transport	3.29E-03
39	GO:0045492: xylan biosynthetic process	3.93E-03
40	GO:0009793: embryo development ending in seed dormancy	4.15E-03
41	GO:0010051: xylem and phloem pattern formation	4.37E-03
42	GO:0015991: ATP hydrolysis coupled proton transport	4.37E-03
43	GO:0045489: pectin biosynthetic process	4.60E-03
44	GO:0010154: fruit development	4.60E-03
45	GO:0009749: response to glucose	5.07E-03
46	GO:0000302: response to reactive oxygen species	5.32E-03
47	GO:0071555: cell wall organization	6.18E-03
48	GO:0010029: regulation of seed germination	7.12E-03
49	GO:0009832: plant-type cell wall biogenesis	8.53E-03
50	GO:0009834: plant-type secondary cell wall biogenesis	8.82E-03
51	GO:0006811: ion transport	8.82E-03
52	GO:0009409: response to cold	9.08E-03
53	GO:0010119: regulation of stomatal movement	9.12E-03
54	GO:0010043: response to zinc ion	9.12E-03
55	GO:0009631: cold acclimation	9.12E-03
56	GO:0009853: photorespiration	9.73E-03
57	GO:0051707: response to other organism	1.16E-02
58	GO:0006486: protein glycosylation	1.44E-02
59	GO:0006096: glycolytic process	1.62E-02
60	GO:0048367: shoot system development	1.65E-02
61	GO:0048316: seed development	1.65E-02
62	GO:0006414: translational elongation	2.30E-02
63	GO:0009790: embryo development	2.41E-02
64	GO:0040008: regulation of growth	2.63E-02
65	GO:0009414: response to water deprivation	3.04E-02
66	GO:0042742: defense response to bacterium	3.12E-02
67	GO:0006970: response to osmotic stress	3.91E-02
68	GO:0009860: pollen tube growth	3.91E-02
69	GO:0048366: leaf development	4.17E-02
70	GO:0080167: response to karrikin	4.32E-02
71	GO:0044550: secondary metabolite biosynthetic process	4.59E-02
72	GO:0045454: cell redox homeostasis	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	3.27E-17
3	GO:0003729: mRNA binding	1.53E-09
4	GO:0015288: porin activity	1.01E-07
5	GO:0008308: voltage-gated anion channel activity	1.50E-07
6	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.70E-06
7	GO:0003746: translation elongation factor activity	4.15E-05
8	GO:0015157: oligosaccharide transmembrane transporter activity	5.03E-05
9	GO:0047517: 1,4-beta-D-xylan synthase activity	1.23E-04
10	GO:0004618: phosphoglycerate kinase activity	1.23E-04
11	GO:0004617: phosphoglycerate dehydrogenase activity	1.23E-04
12	GO:0003923: GPI-anchor transamidase activity	1.23E-04
13	GO:0051536: iron-sulfur cluster binding	1.25E-04
14	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.11E-04
15	GO:0015018: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	2.11E-04
16	GO:0004576: oligosaccharyl transferase activity	4.15E-04
17	GO:0042285: xylosyltransferase activity	5.26E-04
18	GO:0035252: UDP-xylosyltransferase activity	6.44E-04
19	GO:0004222: metalloendopeptidase activity	6.61E-04
20	GO:0004656: procollagen-proline 4-dioxygenase activity	7.68E-04
21	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	8.97E-04
22	GO:0008135: translation factor activity, RNA binding	1.17E-03
23	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.32E-03
24	GO:0008417: fucosyltransferase activity	1.32E-03
25	GO:0031418: L-ascorbic acid binding	2.88E-03
26	GO:0003954: NADH dehydrogenase activity	2.88E-03
27	GO:0051087: chaperone binding	3.08E-03
28	GO:0003743: translation initiation factor activity	3.58E-03
29	GO:0003756: protein disulfide isomerase activity	3.93E-03
30	GO:0008137: NADH dehydrogenase (ubiquinone) activity	5.32E-03
31	GO:0008237: metallopeptidase activity	6.33E-03
32	GO:0016597: amino acid binding	6.59E-03
33	GO:0009055: electron carrier activity	9.26E-03
34	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.73E-03
35	GO:0003993: acid phosphatase activity	1.00E-02
36	GO:0051539: 4 iron, 4 sulfur cluster binding	1.07E-02
37	GO:0051537: 2 iron, 2 sulfur cluster binding	1.23E-02
38	GO:0051287: NAD binding	1.33E-02
39	GO:0019843: rRNA binding	2.16E-02
40	GO:0005525: GTP binding	2.53E-02
41	GO:0016757: transferase activity, transferring glycosyl groups	2.90E-02
42	GO:0005506: iron ion binding	3.07E-02
43	GO:0003824: catalytic activity	3.42E-02
44	GO:0000287: magnesium ion binding	3.66E-02
45	GO:0043531: ADP binding	3.96E-02
46	GO:0016491: oxidoreductase activity	4.09E-02
47	GO:0008233: peptidase activity	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0016020: membrane	1.83E-14
3	GO:0005774: vacuolar membrane	5.25E-14
4	GO:0022625: cytosolic large ribosomal subunit	6.60E-14
5	GO:0022626: cytosolic ribosome	1.43E-13
6	GO:0009506: plasmodesma	3.47E-12
7	GO:0005840: ribosome	1.10E-11
8	GO:0005741: mitochondrial outer membrane	1.63E-10
9	GO:0046930: pore complex	1.50E-07
10	GO:0005783: endoplasmic reticulum	2.09E-07
11	GO:0005730: nucleolus	7.82E-07
12	GO:0015934: large ribosomal subunit	8.21E-07
13	GO:0022627: cytosolic small ribosomal subunit	1.73E-06
14	GO:0008250: oligosaccharyltransferase complex	4.70E-06
15	GO:0009507: chloroplast	4.80E-06
16	GO:0005773: vacuole	5.82E-06
17	GO:0005829: cytosol	6.61E-06
18	GO:0030686: 90S preribosome	5.03E-05
19	GO:0005886: plasma membrane	5.73E-05
20	GO:0005750: mitochondrial respiratory chain complex III	8.62E-05
21	GO:0005794: Golgi apparatus	8.64E-05
22	GO:0005758: mitochondrial intermembrane space	1.25E-04
23	GO:0005737: cytoplasm	2.36E-04
24	GO:0005618: cell wall	5.70E-04
25	GO:0005851: eukaryotic translation initiation factor 2B complex	6.44E-04
26	GO:0005743: mitochondrial inner membrane	1.13E-03
27	GO:0000326: protein storage vacuole	1.17E-03
28	GO:0009536: plastid	1.58E-03
29	GO:0005759: mitochondrial matrix	2.80E-03
30	GO:0045271: respiratory chain complex I	3.08E-03
31	GO:0015935: small ribosomal subunit	3.29E-03
32	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.93E-03
33	GO:0005802: trans-Golgi network	4.59E-03
34	GO:0005768: endosome	5.40E-03
35	GO:0032580: Golgi cisterna membrane	6.07E-03
36	GO:0005788: endoplasmic reticulum lumen	7.12E-03
37	GO:0005739: mitochondrion	1.05E-02
38	GO:0009941: chloroplast envelope	1.21E-02
39	GO:0031966: mitochondrial membrane	1.37E-02
40	GO:0005747: mitochondrial respiratory chain complex I	1.65E-02
41	GO:0009505: plant-type cell wall	3.90E-02
42	GO:0000139: Golgi membrane	4.21E-02
43	GO:0031969: chloroplast membrane	4.32E-02
44	GO:0005789: endoplasmic reticulum membrane	4.74E-02