co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G79550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030149: sphingolipid catabolic process	0.00E+00
2	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
3	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
6	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
7	GO:0007160: cell-matrix adhesion	0.00E+00
8	GO:0006412: translation	6.34E-25
9	GO:0009735: response to cytokinin	9.63E-10
10	GO:0046686: response to cadmium ion	5.94E-06
11	GO:0006820: anion transport	2.57E-05
12	GO:0006626: protein targeting to mitochondrion	3.19E-05
13	GO:0009651: response to salt stress	3.31E-05
14	GO:0042254: ribosome biogenesis	4.67E-05
15	GO:0006564: L-serine biosynthetic process	6.26E-05
16	GO:0030150: protein import into mitochondrial matrix	6.57E-05
17	GO:0006869: lipid transport	1.47E-04
18	GO:0006979: response to oxidative stress	1.95E-04
19	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.12E-04
20	GO:0006102: isocitrate metabolic process	2.12E-04
21	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.36E-04
22	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.36E-04
23	GO:1901349: glucosinolate transport	2.36E-04
24	GO:0006407: rRNA export from nucleus	2.36E-04
25	GO:0090449: phloem glucosinolate loading	2.36E-04
26	GO:0051775: response to redox state	2.36E-04
27	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	2.36E-04
28	GO:1990542: mitochondrial transmembrane transport	2.36E-04
29	GO:0006436: tryptophanyl-tRNA aminoacylation	2.36E-04
30	GO:0009967: positive regulation of signal transduction	5.24E-04
31	GO:0006101: citrate metabolic process	5.24E-04
32	GO:0051788: response to misfolded protein	5.24E-04
33	GO:0015786: UDP-glucose transport	5.24E-04
34	GO:0019752: carboxylic acid metabolic process	5.24E-04
35	GO:1990069: stomatal opening	5.24E-04
36	GO:0042744: hydrogen peroxide catabolic process	6.47E-04
37	GO:0006094: gluconeogenesis	6.63E-04
38	GO:0010043: response to zinc ion	6.81E-04
39	GO:0090351: seedling development	8.34E-04
40	GO:0046168: glycerol-3-phosphate catabolic process	8.52E-04
41	GO:1902626: assembly of large subunit precursor of preribosome	8.52E-04
42	GO:0055074: calcium ion homeostasis	8.52E-04
43	GO:0002181: cytoplasmic translation	8.52E-04
44	GO:0015783: GDP-fucose transport	8.52E-04
45	GO:0042256: mature ribosome assembly	8.52E-04
46	GO:0000027: ribosomal large subunit assembly	1.02E-03
47	GO:0072334: UDP-galactose transmembrane transport	1.21E-03
48	GO:0006072: glycerol-3-phosphate metabolic process	1.21E-03
49	GO:0009647: skotomorphogenesis	1.21E-03
50	GO:0032981: mitochondrial respiratory chain complex I assembly	1.21E-03
51	GO:0001676: long-chain fatty acid metabolic process	1.21E-03
52	GO:0033617: mitochondrial respiratory chain complex IV assembly	1.21E-03
53	GO:0048511: rhythmic process	1.23E-03
54	GO:0009793: embryo development ending in seed dormancy	1.54E-03
55	GO:0051603: proteolysis involved in cellular protein catabolic process	1.59E-03
56	GO:0042274: ribosomal small subunit biogenesis	1.62E-03
57	GO:0010363: regulation of plant-type hypersensitive response	1.62E-03
58	GO:0006096: glycolytic process	1.88E-03
59	GO:0010154: fruit development	2.00E-03
60	GO:0045116: protein neddylation	2.07E-03
61	GO:0036065: fucosylation	2.07E-03
62	GO:0018279: protein N-linked glycosylation via asparagine	2.07E-03
63	GO:0006097: glyoxylate cycle	2.07E-03
64	GO:1902183: regulation of shoot apical meristem development	2.07E-03
65	GO:0043248: proteasome assembly	2.55E-03
66	GO:0009228: thiamine biosynthetic process	2.55E-03
67	GO:0009955: adaxial/abaxial pattern specification	3.06E-03
68	GO:1901001: negative regulation of response to salt stress	3.06E-03
69	GO:0009612: response to mechanical stimulus	3.06E-03
70	GO:0006458: 'de novo' protein folding	3.06E-03
71	GO:0009648: photoperiodism	3.06E-03
72	GO:0048528: post-embryonic root development	3.61E-03
73	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.61E-03
74	GO:0050829: defense response to Gram-negative bacterium	3.61E-03
75	GO:0009610: response to symbiotic fungus	3.61E-03
76	GO:0000028: ribosomal small subunit assembly	4.19E-03
77	GO:0031540: regulation of anthocyanin biosynthetic process	4.19E-03
78	GO:0006413: translational initiation	4.36E-03
79	GO:0010417: glucuronoxylan biosynthetic process	4.79E-03
80	GO:0010208: pollen wall assembly	4.79E-03
81	GO:0006811: ion transport	5.11E-03
82	GO:0098656: anion transmembrane transport	5.43E-03
83	GO:0009051: pentose-phosphate shunt, oxidative branch	5.43E-03
84	GO:0006098: pentose-phosphate shunt	5.43E-03
85	GO:0006754: ATP biosynthetic process	5.43E-03
86	GO:0009060: aerobic respiration	5.43E-03
87	GO:0015780: nucleotide-sugar transport	5.43E-03
88	GO:0009617: response to bacterium	5.97E-03
89	GO:0043067: regulation of programmed cell death	6.09E-03
90	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.09E-03
91	GO:0006099: tricarboxylic acid cycle	6.14E-03
92	GO:0010015: root morphogenesis	7.50E-03
93	GO:0006913: nucleocytoplasmic transport	7.50E-03
94	GO:0009682: induced systemic resistance	7.50E-03
95	GO:0072593: reactive oxygen species metabolic process	7.50E-03
96	GO:0015770: sucrose transport	7.50E-03
97	GO:0016485: protein processing	7.50E-03
98	GO:0006829: zinc II ion transport	9.02E-03
99	GO:0006807: nitrogen compound metabolic process	9.02E-03
100	GO:0006006: glucose metabolic process	9.02E-03
101	GO:0009664: plant-type cell wall organization	9.52E-03
102	GO:0002237: response to molecule of bacterial origin	9.82E-03
103	GO:0009969: xyloglucan biosynthetic process	1.06E-02
104	GO:0009737: response to abscisic acid	1.14E-02
105	GO:0034976: response to endoplasmic reticulum stress	1.15E-02
106	GO:0055114: oxidation-reduction process	1.16E-02
107	GO:0006289: nucleotide-excision repair	1.24E-02
108	GO:0006487: protein N-linked glycosylation	1.24E-02
109	GO:0048316: seed development	1.25E-02
110	GO:0048367: shoot system development	1.25E-02
111	GO:0006418: tRNA aminoacylation for protein translation	1.32E-02
112	GO:0061077: chaperone-mediated protein folding	1.42E-02
113	GO:0015992: proton transport	1.42E-02
114	GO:0051260: protein homooligomerization	1.42E-02
115	GO:0010431: seed maturation	1.42E-02
116	GO:0055085: transmembrane transport	1.44E-02
117	GO:0009409: response to cold	1.50E-02
118	GO:0030245: cellulose catabolic process	1.51E-02
119	GO:0007005: mitochondrion organization	1.51E-02
120	GO:0006511: ubiquitin-dependent protein catabolic process	1.59E-02
121	GO:0071215: cellular response to abscisic acid stimulus	1.61E-02
122	GO:0040007: growth	1.61E-02
123	GO:0010584: pollen exine formation	1.70E-02
124	GO:0045492: xylan biosynthetic process	1.70E-02
125	GO:0009561: megagametogenesis	1.70E-02
126	GO:0006414: translational elongation	1.83E-02
127	GO:0015991: ATP hydrolysis coupled proton transport	1.91E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	1.91E-02
129	GO:0010051: xylem and phloem pattern formation	1.91E-02
130	GO:0010118: stomatal movement	1.91E-02
131	GO:0006520: cellular amino acid metabolic process	2.01E-02
132	GO:0010197: polar nucleus fusion	2.01E-02
133	GO:0015986: ATP synthesis coupled proton transport	2.12E-02
134	GO:0006623: protein targeting to vacuole	2.23E-02
135	GO:0010183: pollen tube guidance	2.23E-02
136	GO:0048825: cotyledon development	2.23E-02
137	GO:0000302: response to reactive oxygen species	2.34E-02
138	GO:0010193: response to ozone	2.34E-02
139	GO:0030163: protein catabolic process	2.56E-02
140	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.83E-02
141	GO:0009627: systemic acquired resistance	3.29E-02
142	GO:0009817: defense response to fungus, incompatible interaction	3.67E-02
143	GO:0009832: plant-type cell wall biogenesis	3.80E-02
144	GO:0009834: plant-type secondary cell wall biogenesis	3.93E-02
145	GO:0010119: regulation of stomatal movement	4.07E-02
146	GO:0009631: cold acclimation	4.07E-02
147	GO:0009853: photorespiration	4.34E-02
148	GO:0048366: leaf development	4.58E-02
149	GO:0080167: response to karrikin	4.82E-02
150	GO:0006631: fatty acid metabolic process	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0016881: acid-amino acid ligase activity	0.00E+00
2	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
3	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
6	GO:0003735: structural constituent of ribosome	1.68E-31
7	GO:0003729: mRNA binding	8.79E-10
8	GO:0004617: phosphoglycerate dehydrogenase activity	2.61E-06
9	GO:0015288: porin activity	4.36E-06
10	GO:0003746: translation elongation factor activity	4.45E-06
11	GO:0008308: voltage-gated anion channel activity	6.34E-06
12	GO:0051287: NAD binding	1.38E-05
13	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.26E-05
14	GO:0019843: rRNA binding	6.80E-05
15	GO:0005507: copper ion binding	6.86E-05
16	GO:0004298: threonine-type endopeptidase activity	8.85E-05
17	GO:0004656: procollagen-proline 4-dioxygenase activity	1.27E-04
18	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.36E-04
19	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.36E-04
20	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.36E-04
21	GO:0004830: tryptophan-tRNA ligase activity	2.36E-04
22	GO:0090448: glucosinolate:proton symporter activity	2.36E-04
23	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.36E-04
24	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	2.36E-04
25	GO:0008135: translation factor activity, RNA binding	2.63E-04
26	GO:0008289: lipid binding	3.94E-04
27	GO:0003994: aconitate hydratase activity	5.24E-04
28	GO:0047517: 1,4-beta-D-xylan synthase activity	5.24E-04
29	GO:0005078: MAP-kinase scaffold activity	5.24E-04
30	GO:0019172: glyoxalase III activity	5.24E-04
31	GO:0008517: folic acid transporter activity	5.24E-04
32	GO:0004634: phosphopyruvate hydratase activity	5.24E-04
33	GO:0019781: NEDD8 activating enzyme activity	5.24E-04
34	GO:0015462: ATPase-coupled protein transmembrane transporter activity	8.52E-04
35	GO:0015018: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	8.52E-04
36	GO:0004148: dihydrolipoyl dehydrogenase activity	8.52E-04
37	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.52E-04
38	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	8.52E-04
39	GO:0005457: GDP-fucose transmembrane transporter activity	8.52E-04
40	GO:0031418: L-ascorbic acid binding	1.02E-03
41	GO:0003743: translation initiation factor activity	1.09E-03
42	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.21E-03
43	GO:0005460: UDP-glucose transmembrane transporter activity	1.21E-03
44	GO:0008097: 5S rRNA binding	1.21E-03
45	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.21E-03
46	GO:0017077: oxidative phosphorylation uncoupler activity	1.21E-03
47	GO:0070628: proteasome binding	1.62E-03
48	GO:0004576: oligosaccharyl transferase activity	1.62E-03
49	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.62E-03
50	GO:0004601: peroxidase activity	1.67E-03
51	GO:0005459: UDP-galactose transmembrane transporter activity	2.07E-03
52	GO:0008641: small protein activating enzyme activity	2.07E-03
53	GO:0042285: xylosyltransferase activity	2.07E-03
54	GO:0004040: amidase activity	2.07E-03
55	GO:0008233: peptidase activity	2.26E-03
56	GO:0004332: fructose-bisphosphate aldolase activity	2.55E-03
57	GO:0031593: polyubiquitin binding	2.55E-03
58	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.55E-03
59	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.55E-03
60	GO:0102391: decanoate--CoA ligase activity	3.06E-03
61	GO:0016597: amino acid binding	3.36E-03
62	GO:0016831: carboxy-lyase activity	3.61E-03
63	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.61E-03
64	GO:0004467: long-chain fatty acid-CoA ligase activity	3.61E-03
65	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.61E-03
66	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.64E-03
67	GO:0008417: fucosyltransferase activity	5.43E-03
68	GO:0000989: transcription factor activity, transcription factor binding	5.43E-03
69	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.43E-03
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.87E-03
71	GO:0003993: acid phosphatase activity	6.14E-03
72	GO:0050661: NADP binding	6.69E-03
73	GO:0008515: sucrose transmembrane transporter activity	7.50E-03
74	GO:0008559: xenobiotic-transporting ATPase activity	7.50E-03
75	GO:0044183: protein binding involved in protein folding	7.50E-03
76	GO:0000287: magnesium ion binding	8.11E-03
77	GO:0015266: protein channel activity	9.02E-03
78	GO:0008266: poly(U) RNA binding	9.82E-03
79	GO:0005515: protein binding	9.97E-03
80	GO:0051119: sugar transmembrane transporter activity	1.06E-02
81	GO:0043130: ubiquitin binding	1.24E-02
82	GO:0008324: cation transmembrane transporter activity	1.32E-02
83	GO:0051087: chaperone binding	1.32E-02
84	GO:0051082: unfolded protein binding	1.46E-02
85	GO:0008810: cellulase activity	1.61E-02
86	GO:0008514: organic anion transmembrane transporter activity	1.70E-02
87	GO:0003756: protein disulfide isomerase activity	1.70E-02
88	GO:0004812: aminoacyl-tRNA ligase activity	1.80E-02
89	GO:0020037: heme binding	1.94E-02
90	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.01E-02
91	GO:0005199: structural constituent of cell wall	2.01E-02
92	GO:0046873: metal ion transmembrane transporter activity	2.01E-02
93	GO:0030170: pyridoxal phosphate binding	2.03E-02
94	GO:0005525: GTP binding	2.11E-02
95	GO:0010181: FMN binding	2.12E-02
96	GO:0005509: calcium ion binding	2.55E-02
97	GO:0003684: damaged DNA binding	2.68E-02
98	GO:0008483: transaminase activity	2.80E-02
99	GO:0016887: ATPase activity	3.10E-02
100	GO:0000166: nucleotide binding	3.67E-02
101	GO:0046982: protein heterodimerization activity	3.83E-02
102	GO:0004222: metalloendopeptidase activity	3.93E-02
103	GO:0050897: cobalt ion binding	4.07E-02
104	GO:0051539: 4 iron, 4 sulfur cluster binding	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0008305: integrin complex	0.00E+00
2	GO:0005832: chaperonin-containing T-complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0022625: cytosolic large ribosomal subunit	1.09E-23
5	GO:0022626: cytosolic ribosome	8.27E-23
6	GO:0005774: vacuolar membrane	1.31E-21
7	GO:0005840: ribosome	3.79E-19
8	GO:0005829: cytosol	5.11E-19
9	GO:0009506: plasmodesma	6.54E-18
10	GO:0022627: cytosolic small ribosomal subunit	2.24E-14
11	GO:0016020: membrane	1.91E-13
12	GO:0005773: vacuole	3.22E-11
13	GO:0005730: nucleolus	2.07E-10
14	GO:0005783: endoplasmic reticulum	1.63E-08
15	GO:0005741: mitochondrial outer membrane	5.55E-08
16	GO:0005618: cell wall	7.67E-08
17	GO:0005737: cytoplasm	1.11E-07
18	GO:0015934: large ribosomal subunit	1.22E-07
19	GO:0005886: plasma membrane	6.47E-07
20	GO:0046930: pore complex	6.34E-06
21	GO:0000502: proteasome complex	1.79E-05
22	GO:0009507: chloroplast	4.08E-05
23	GO:0008250: oligosaccharyltransferase complex	6.26E-05
24	GO:0005839: proteasome core complex	8.85E-05
25	GO:0030686: 90S preribosome	2.36E-04
26	GO:0005740: mitochondrial envelope	4.42E-04
27	GO:0000015: phosphopyruvate hydratase complex	5.24E-04
28	GO:0005743: mitochondrial inner membrane	8.34E-04
29	GO:0046861: glyoxysomal membrane	8.52E-04
30	GO:0009530: primary cell wall	8.52E-04
31	GO:0005794: Golgi apparatus	8.67E-04
32	GO:0005758: mitochondrial intermembrane space	1.02E-03
33	GO:0009505: plant-type cell wall	1.21E-03
34	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.21E-03
35	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.59E-03
36	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.62E-03
37	GO:0005851: eukaryotic translation initiation factor 2B complex	2.55E-03
38	GO:0005788: endoplasmic reticulum lumen	3.76E-03
39	GO:0009707: chloroplast outer membrane	4.64E-03
40	GO:0009514: glyoxysome	4.79E-03
41	GO:0005742: mitochondrial outer membrane translocase complex	4.79E-03
42	GO:0000326: protein storage vacuole	4.79E-03
43	GO:0005789: endoplasmic reticulum membrane	5.99E-03
44	GO:0017119: Golgi transport complex	6.78E-03
45	GO:0008541: proteasome regulatory particle, lid subcomplex	7.50E-03
46	GO:0005750: mitochondrial respiratory chain complex III	9.82E-03
47	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.06E-02
48	GO:0005747: mitochondrial respiratory chain complex I	1.25E-02
49	GO:0005834: heterotrimeric G-protein complex	1.29E-02
50	GO:0015935: small ribosomal subunit	1.42E-02
51	GO:0005802: trans-Golgi network	2.03E-02
52	GO:0005759: mitochondrial matrix	2.30E-02
53	GO:0005768: endosome	2.46E-02
54	GO:0071944: cell periphery	2.56E-02
55	GO:0032580: Golgi cisterna membrane	2.68E-02
56	GO:0048046: apoplast	3.15E-02
57	GO:0009536: plastid	3.87E-02
58	GO:0000325: plant-type vacuole	4.07E-02