co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G79470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010636: positive regulation of mitochondrial fusion	0.00E+00
2	GO:0048312: intracellular distribution of mitochondria	0.00E+00
3	GO:0009157: deoxyribonucleoside monophosphate biosynthetic process	0.00E+00
4	GO:0000494: box C/D snoRNA 3'-end processing	4.04E-05
5	GO:1990258: histone glutamine methylation	4.04E-05
6	GO:0006364: rRNA processing	6.29E-05
7	GO:0045041: protein import into mitochondrial intermembrane space	1.00E-04
8	GO:0006412: translation	1.09E-04
9	GO:0007005: mitochondrion organization	1.25E-04
10	GO:0009451: RNA modification	2.37E-04
11	GO:0080156: mitochondrial mRNA modification	2.42E-04
12	GO:0006515: misfolded or incompletely synthesized protein catabolic process	2.55E-04
13	GO:0051131: chaperone-mediated protein complex assembly	2.55E-04
14	GO:0009165: nucleotide biosynthetic process	3.43E-04
15	GO:1900864: mitochondrial RNA modification	3.43E-04
16	GO:0031167: rRNA methylation	4.37E-04
17	GO:0006139: nucleobase-containing compound metabolic process	5.37E-04
18	GO:0016554: cytidine to uridine editing	5.37E-04
19	GO:0000741: karyogamy	5.37E-04
20	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.40E-04
21	GO:0006458: 'de novo' protein folding	6.40E-04
22	GO:0016444: somatic cell DNA recombination	6.40E-04
23	GO:0042026: protein refolding	6.40E-04
24	GO:0009396: folic acid-containing compound biosynthetic process	7.49E-04
25	GO:0001510: RNA methylation	9.77E-04
26	GO:0007338: single fertilization	1.10E-03
27	GO:0035999: tetrahydrofolate interconversion	1.22E-03
28	GO:1900865: chloroplast RNA modification	1.22E-03
29	GO:0006396: RNA processing	1.40E-03
30	GO:0006541: glutamine metabolic process	1.92E-03
31	GO:0000027: ribosomal large subunit assembly	2.39E-03
32	GO:0006334: nucleosome assembly	2.72E-03
33	GO:0061077: chaperone-mediated protein folding	2.72E-03
34	GO:0006730: one-carbon metabolic process	2.89E-03
35	GO:0008033: tRNA processing	3.61E-03
36	GO:0010501: RNA secondary structure unwinding	3.61E-03
37	GO:0000413: protein peptidyl-prolyl isomerization	3.61E-03
38	GO:0042254: ribosome biogenesis	3.64E-03
39	GO:0010197: polar nucleus fusion	3.80E-03
40	GO:0006635: fatty acid beta-oxidation	4.38E-03
41	GO:0009567: double fertilization forming a zygote and endosperm	5.00E-03
42	GO:0009409: response to cold	6.32E-03
43	GO:0010311: lateral root formation	7.01E-03
44	GO:0000724: double-strand break repair via homologous recombination	7.74E-03
45	GO:0009853: photorespiration	7.99E-03
46	GO:0008283: cell proliferation	9.53E-03
47	GO:0000154: rRNA modification	1.03E-02
48	GO:0009553: embryo sac development	1.48E-02
49	GO:0006457: protein folding	1.50E-02
50	GO:0000398: mRNA splicing, via spliceosome	1.67E-02
51	GO:0009790: embryo development	1.97E-02
52	GO:0008380: RNA splicing	2.52E-02
53	GO:0046686: response to cadmium ion	3.65E-02
54	GO:0009408: response to heat	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0003922: GMP synthase (glutamine-hydrolyzing) activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0019136: deoxynucleoside kinase activity	0.00E+00
4	GO:0003723: RNA binding	6.21E-09
5	GO:0003735: structural constituent of ribosome	6.39E-06
6	GO:0030515: snoRNA binding	1.02E-05
7	GO:1990259: histone-glutamine methyltransferase activity	4.04E-05
8	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.00E-04
9	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.00E-04
10	GO:0070361: mitochondrial light strand promoter anti-sense binding	1.00E-04
11	GO:0019843: rRNA binding	1.47E-04
12	GO:0008649: rRNA methyltransferase activity	1.73E-04
13	GO:0016773: phosphotransferase activity, alcohol group as acceptor	4.37E-04
14	GO:0050897: cobalt ion binding	5.28E-04
15	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	5.37E-04
16	GO:0016462: pyrophosphatase activity	5.37E-04
17	GO:0008173: RNA methyltransferase activity	9.77E-04
18	GO:0044183: protein binding involved in protein folding	1.49E-03
19	GO:0000175: 3'-5'-exoribonuclease activity	1.77E-03
20	GO:0004176: ATP-dependent peptidase activity	2.72E-03
21	GO:0004004: ATP-dependent RNA helicase activity	6.31E-03
22	GO:0008236: serine-type peptidase activity	6.54E-03
23	GO:0004519: endonuclease activity	7.07E-03
24	GO:0003729: mRNA binding	7.12E-03
25	GO:0003746: translation elongation factor activity	7.99E-03
26	GO:0003697: single-stranded DNA binding	7.99E-03
27	GO:0042393: histone binding	8.75E-03
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.06E-02
29	GO:0000166: nucleotide binding	1.16E-02
30	GO:0051082: unfolded protein binding	1.51E-02
31	GO:0008026: ATP-dependent helicase activity	1.57E-02
32	GO:0005507: copper ion binding	1.65E-02
33	GO:0004252: serine-type endopeptidase activity	1.91E-02
34	GO:0003682: chromatin binding	3.16E-02
35	GO:0005524: ATP binding	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0005739: mitochondrion	4.17E-08
2	GO:0032040: small-subunit processome	4.12E-07
3	GO:0005840: ribosome	7.57E-07
4	GO:0031428: box C/D snoRNP complex	5.05E-06
5	GO:0005730: nucleolus	3.13E-04
6	GO:0000178: exosome (RNase complex)	4.37E-04
7	GO:0005747: mitochondrial respiratory chain complex I	1.18E-03
8	GO:0015030: Cajal body	1.22E-03
9	GO:0005759: mitochondrial matrix	2.12E-03
10	GO:0009507: chloroplast	3.34E-03
11	GO:0005829: cytosol	3.51E-03
12	GO:0022625: cytosolic large ribosomal subunit	4.64E-03
13	GO:0009536: plastid	5.57E-03
14	GO:0005618: cell wall	6.05E-03
15	GO:0015934: large ribosomal subunit	7.49E-03
16	GO:0005635: nuclear envelope	1.23E-02
17	GO:0005681: spliceosomal complex	1.32E-02
18	GO:0009543: chloroplast thylakoid lumen	1.77E-02
19	GO:0005774: vacuolar membrane	2.08E-02
20	GO:0046658: anchored component of plasma membrane	2.72E-02
21	GO:0009941: chloroplast envelope	3.05E-02
22	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.24E-02