Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G78920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019307: mannose biosynthetic process0.00E+00
2GO:0006489: dolichyl diphosphate biosynthetic process0.00E+00
3GO:0045047: protein targeting to ER0.00E+00
4GO:0030970: retrograde protein transport, ER to cytosol0.00E+00
5GO:0006511: ubiquitin-dependent protein catabolic process1.90E-14
6GO:0034976: response to endoplasmic reticulum stress3.00E-14
7GO:0030163: protein catabolic process2.93E-10
8GO:0006457: protein folding1.07E-09
9GO:0006487: protein N-linked glycosylation3.43E-09
10GO:0030433: ubiquitin-dependent ERAD pathway6.84E-09
11GO:0045454: cell redox homeostasis3.48E-08
12GO:0051788: response to misfolded protein6.26E-08
13GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.09E-06
14GO:0043248: proteasome assembly3.09E-06
15GO:0042176: regulation of protein catabolic process3.09E-06
16GO:0035266: meristem growth3.00E-05
17GO:0007292: female gamete generation3.00E-05
18GO:0046686: response to cadmium ion1.24E-04
19GO:0060968: regulation of gene silencing1.32E-04
20GO:0006013: mannose metabolic process1.32E-04
21GO:0055074: calcium ion homeostasis1.32E-04
22GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.59E-04
23GO:0009647: skotomorphogenesis1.97E-04
24GO:0001676: long-chain fatty acid metabolic process1.97E-04
25GO:0009298: GDP-mannose biosynthetic process1.97E-04
26GO:0010483: pollen tube reception2.67E-04
27GO:0018279: protein N-linked glycosylation via asparagine3.42E-04
28GO:0036065: fucosylation3.42E-04
29GO:0045087: innate immune response4.00E-04
30GO:0048827: phyllome development4.20E-04
31GO:0048232: male gamete generation4.20E-04
32GO:0009651: response to salt stress5.37E-04
33GO:0015937: coenzyme A biosynthetic process5.88E-04
34GO:0048528: post-embryonic root development5.88E-04
35GO:0010078: maintenance of root meristem identity6.76E-04
36GO:0031540: regulation of anthocyanin biosynthetic process6.76E-04
37GO:0030968: endoplasmic reticulum unfolded protein response7.68E-04
38GO:0046685: response to arsenic-containing substance8.63E-04
39GO:0010205: photoinhibition9.61E-04
40GO:0043067: regulation of programmed cell death9.61E-04
41GO:0048829: root cap development1.06E-03
42GO:0010072: primary shoot apical meristem specification1.16E-03
43GO:0010015: root morphogenesis1.16E-03
44GO:0010102: lateral root morphogenesis1.38E-03
45GO:0009933: meristem structural organization1.50E-03
46GO:0019853: L-ascorbic acid biosynthetic process1.61E-03
47GO:0090351: seedling development1.61E-03
48GO:0009969: xyloglucan biosynthetic process1.61E-03
49GO:0042147: retrograde transport, endosome to Golgi2.66E-03
50GO:0006979: response to oxidative stress2.69E-03
51GO:0000413: protein peptidyl-prolyl isomerization2.80E-03
52GO:0048868: pollen tube development2.94E-03
53GO:0048825: cotyledon development3.24E-03
54GO:0010193: response to ozone3.40E-03
55GO:0006886: intracellular protein transport3.75E-03
56GO:0009567: double fertilization forming a zygote and endosperm3.87E-03
57GO:0009408: response to heat4.47E-03
58GO:0048364: root development4.66E-03
59GO:0006888: ER to Golgi vesicle-mediated transport4.88E-03
60GO:0009832: plant-type cell wall biogenesis5.41E-03
61GO:0010311: lateral root formation5.41E-03
62GO:0006499: N-terminal protein myristoylation5.60E-03
63GO:0010043: response to zinc ion5.78E-03
64GO:0007275: multicellular organism development6.25E-03
65GO:0006631: fatty acid metabolic process6.94E-03
66GO:0009735: response to cytokinin7.23E-03
67GO:0000209: protein polyubiquitination7.54E-03
68GO:0009644: response to high light intensity7.75E-03
69GO:0009965: leaf morphogenesis7.96E-03
70GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.38E-03
71GO:0009736: cytokinin-activated signaling pathway9.03E-03
72GO:0006486: protein glycosylation9.03E-03
73GO:0051603: proteolysis involved in cellular protein catabolic process9.25E-03
74GO:0048367: shoot system development1.04E-02
75GO:0048316: seed development1.04E-02
76GO:0009553: embryo sac development1.13E-02
77GO:0051726: regulation of cell cycle1.21E-02
78GO:0009790: embryo development1.51E-02
79GO:0048366: leaf development2.61E-02
80GO:0016192: vesicle-mediated transport2.81E-02
81GO:0009751: response to salicylic acid3.54E-02
82GO:0009793: embryo development ending in seed dormancy3.72E-02
RankGO TermAdjusted P value
1GO:0004615: phosphomannomutase activity0.00E+00
2GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
3GO:0003756: protein disulfide isomerase activity2.26E-13
4GO:0004298: threonine-type endopeptidase activity5.49E-09
5GO:0008233: peptidase activity7.45E-07
6GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.98E-06
7GO:0036402: proteasome-activating ATPase activity3.09E-06
8GO:0030234: enzyme regulator activity2.10E-05
9GO:0015157: oligosaccharide transmembrane transporter activity3.00E-05
10GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity3.00E-05
11GO:1990381: ubiquitin-specific protease binding3.00E-05
12GO:0017025: TBP-class protein binding4.64E-05
13GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity7.58E-05
14GO:0004594: pantothenate kinase activity7.58E-05
15GO:0016853: isomerase activity1.41E-04
16GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.67E-04
17GO:0102391: decanoate--CoA ligase activity5.02E-04
18GO:0004467: long-chain fatty acid-CoA ligase activity5.88E-04
19GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity5.88E-04
20GO:0005515: protein binding8.49E-04
21GO:0008417: fucosyltransferase activity8.63E-04
22GO:0016887: ATPase activity9.32E-04
23GO:0051082: unfolded protein binding9.54E-04
24GO:0043130: ubiquitin binding1.86E-03
25GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.17E-03
26GO:0030246: carbohydrate binding1.07E-02
27GO:0008565: protein transporter activity1.54E-02
28GO:0005215: transporter activity1.78E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0000502: proteasome complex8.54E-24
3GO:0005788: endoplasmic reticulum lumen2.54E-14
4GO:0005783: endoplasmic reticulum7.95E-13
5GO:0008541: proteasome regulatory particle, lid subcomplex5.83E-10
6GO:0005839: proteasome core complex5.49E-09
7GO:0031595: nuclear proteasome complex1.92E-08
8GO:0019773: proteasome core complex, alpha-subunit complex4.47E-08
9GO:0005774: vacuolar membrane5.24E-08
10GO:0008540: proteasome regulatory particle, base subcomplex8.90E-08
11GO:0008250: oligosaccharyltransferase complex1.98E-06
12GO:0005829: cytosol3.77E-06
13GO:0031597: cytosolic proteasome complex4.52E-06
14GO:0000836: Hrd1p ubiquitin ligase complex3.00E-05
15GO:0044322: endoplasmic reticulum quality control compartment3.00E-05
16GO:0009505: plant-type cell wall7.88E-05
17GO:0046861: glyoxysomal membrane1.32E-04
18GO:0036513: Derlin-1 retrotranslocation complex1.97E-04
19GO:0030127: COPII vesicle coat4.20E-04
20GO:0030904: retromer complex4.20E-04
21GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.88E-04
22GO:0000326: protein storage vacuole7.68E-04
23GO:0009514: glyoxysome7.68E-04
24GO:0005794: Golgi apparatus8.02E-04
25GO:0009506: plasmodesma1.58E-03
26GO:0032580: Golgi cisterna membrane3.87E-03
27GO:0005789: endoplasmic reticulum membrane4.54E-03
28GO:0005737: cytoplasm5.03E-03
29GO:0005773: vacuole5.26E-03
30GO:0005886: plasma membrane5.28E-03
31GO:0005819: spindle6.54E-03
32GO:0031902: late endosome membrane6.94E-03
33GO:0022626: cytosolic ribosome7.57E-03
34GO:0005623: cell1.38E-02
35GO:0009524: phragmoplast1.41E-02
36GO:0005618: cell wall1.52E-02
37GO:0009507: chloroplast2.17E-02
38GO:0016020: membrane2.39E-02
39GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.48E-02
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Gene type



Gene DE type