co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007530: sex determination	0.00E+00
2	GO:0001881: receptor recycling	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0006412: translation	7.26E-32
5	GO:0042254: ribosome biogenesis	3.65E-17
6	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.49E-04
7	GO:0000028: ribosomal small subunit assembly	1.91E-04
8	GO:0001560: regulation of cell growth by extracellular stimulus	2.20E-04
9	GO:0045905: positive regulation of translational termination	4.90E-04
10	GO:0008154: actin polymerization or depolymerization	4.90E-04
11	GO:0045901: positive regulation of translational elongation	4.90E-04
12	GO:0006452: translational frameshifting	4.90E-04
13	GO:0008333: endosome to lysosome transport	7.98E-04
14	GO:0002181: cytoplasmic translation	7.98E-04
15	GO:0045793: positive regulation of cell size	7.98E-04
16	GO:0000027: ribosomal large subunit assembly	9.27E-04
17	GO:0006241: CTP biosynthetic process	1.14E-03
18	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.14E-03
19	GO:0006165: nucleoside diphosphate phosphorylation	1.14E-03
20	GO:0042989: sequestering of actin monomers	1.14E-03
21	GO:0006228: UTP biosynthetic process	1.14E-03
22	GO:0031936: negative regulation of chromatin silencing	1.14E-03
23	GO:0006168: adenine salvage	1.14E-03
24	GO:0032877: positive regulation of DNA endoreduplication	1.14E-03
25	GO:0006166: purine ribonucleoside salvage	1.14E-03
26	GO:0070301: cellular response to hydrogen peroxide	1.14E-03
27	GO:0009793: embryo development ending in seed dormancy	1.20E-03
28	GO:0032366: intracellular sterol transport	1.51E-03
29	GO:0051781: positive regulation of cell division	1.51E-03
30	GO:0042274: ribosomal small subunit biogenesis	1.51E-03
31	GO:0010387: COP9 signalosome assembly	1.51E-03
32	GO:0048830: adventitious root development	1.51E-03
33	GO:0006183: GTP biosynthetic process	1.51E-03
34	GO:0046686: response to cadmium ion	1.56E-03
35	GO:0044209: AMP salvage	1.93E-03
36	GO:0019761: glucosinolate biosynthetic process	2.38E-03
37	GO:0006574: valine catabolic process	2.38E-03
38	GO:0006464: cellular protein modification process	2.70E-03
39	GO:0009955: adaxial/abaxial pattern specification	2.86E-03
40	GO:1901001: negative regulation of response to salt stress	2.86E-03
41	GO:0000338: protein deneddylation	3.36E-03
42	GO:0006413: translational initiation	3.82E-03
43	GO:0009690: cytokinin metabolic process	3.90E-03
44	GO:0009245: lipid A biosynthetic process	5.06E-03
45	GO:0098656: anion transmembrane transport	5.06E-03
46	GO:0009853: photorespiration	5.30E-03
47	GO:0006099: tricarboxylic acid cycle	5.54E-03
48	GO:0030042: actin filament depolymerization	5.68E-03
49	GO:0000387: spliceosomal snRNP assembly	5.68E-03
50	GO:0043069: negative regulation of programmed cell death	6.32E-03
51	GO:0015770: sucrose transport	6.98E-03
52	GO:0009684: indoleacetic acid biosynthetic process	6.98E-03
53	GO:0009735: response to cytokinin	7.48E-03
54	GO:0006820: anion transport	7.68E-03
55	GO:0016925: protein sumoylation	7.68E-03
56	GO:0010102: lateral root morphogenesis	8.39E-03
57	GO:0010628: positive regulation of gene expression	8.39E-03
58	GO:0006626: protein targeting to mitochondrion	8.39E-03
59	GO:0010229: inflorescence development	8.39E-03
60	GO:0007034: vacuolar transport	9.13E-03
61	GO:0006446: regulation of translational initiation	9.13E-03
62	GO:0006071: glycerol metabolic process	1.07E-02
63	GO:0007010: cytoskeleton organization	1.15E-02
64	GO:0006289: nucleotide-excision repair	1.15E-02
65	GO:0006487: protein N-linked glycosylation	1.15E-02
66	GO:0009116: nucleoside metabolic process	1.15E-02
67	GO:0045454: cell redox homeostasis	1.21E-02
68	GO:0051260: protein homooligomerization	1.32E-02
69	GO:0010431: seed maturation	1.32E-02
70	GO:0007005: mitochondrion organization	1.40E-02
71	GO:0040007: growth	1.49E-02
72	GO:0010089: xylem development	1.58E-02
73	GO:0042147: retrograde transport, endosome to Golgi	1.68E-02
74	GO:0034220: ion transmembrane transport	1.77E-02
75	GO:0010118: stomatal movement	1.77E-02
76	GO:0006520: cellular amino acid metabolic process	1.87E-02
77	GO:0006623: protein targeting to vacuole	2.07E-02
78	GO:0010183: pollen tube guidance	2.07E-02
79	GO:0010193: response to ozone	2.17E-02
80	GO:0000302: response to reactive oxygen species	2.17E-02
81	GO:0006914: autophagy	2.49E-02
82	GO:0006979: response to oxidative stress	2.50E-02
83	GO:0010286: heat acclimation	2.60E-02
84	GO:0000910: cytokinesis	2.71E-02
85	GO:0008380: RNA splicing	2.72E-02
86	GO:0009617: response to bacterium	2.72E-02
87	GO:0048527: lateral root development	3.78E-02
88	GO:0080167: response to karrikin	4.36E-02
89	GO:0006511: ubiquitin-dependent protein catabolic process	4.70E-02
90	GO:0009640: photomorphogenesis	4.83E-02
91	GO:0008283: cell proliferation	4.83E-02
92	GO:0009926: auxin polar transport	4.83E-02
93	GO:0051707: response to other organism	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0080108: S-alkylthiohydroximate lyase activity	0.00E+00
2	GO:0005212: structural constituent of eye lens	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0003735: structural constituent of ribosome	1.60E-39
5	GO:0003729: mRNA binding	1.95E-05
6	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.49E-04
7	GO:0043022: ribosome binding	1.91E-04
8	GO:0019786: Atg8-specific protease activity	2.20E-04
9	GO:0019843: rRNA binding	4.53E-04
10	GO:0004129: cytochrome-c oxidase activity	4.63E-04
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.90E-04
12	GO:0019779: Atg8 activating enzyme activity	4.90E-04
13	GO:0008517: folic acid transporter activity	4.90E-04
14	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.90E-04
15	GO:0047364: desulfoglucosinolate sulfotransferase activity	4.90E-04
16	GO:0008430: selenium binding	7.98E-04
17	GO:0003999: adenine phosphoribosyltransferase activity	1.14E-03
18	GO:0004550: nucleoside diphosphate kinase activity	1.14E-03
19	GO:0008097: 5S rRNA binding	1.14E-03
20	GO:0070628: proteasome binding	1.51E-03
21	GO:0004576: oligosaccharyl transferase activity	1.51E-03
22	GO:0019776: Atg8 ligase activity	1.51E-03
23	GO:0010011: auxin binding	1.51E-03
24	GO:0016846: carbon-sulfur lyase activity	1.93E-03
25	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.93E-03
26	GO:0003785: actin monomer binding	1.93E-03
27	GO:0004040: amidase activity	1.93E-03
28	GO:0005496: steroid binding	1.93E-03
29	GO:0031386: protein tag	1.93E-03
30	GO:0031593: polyubiquitin binding	2.38E-03
31	GO:0031177: phosphopantetheine binding	2.38E-03
32	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	2.38E-03
33	GO:0000035: acyl binding	2.86E-03
34	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.86E-03
35	GO:0051920: peroxiredoxin activity	2.86E-03
36	GO:0042162: telomeric DNA binding	3.36E-03
37	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.90E-03
38	GO:0015288: porin activity	3.90E-03
39	GO:0016209: antioxidant activity	3.90E-03
40	GO:0008308: voltage-gated anion channel activity	4.47E-03
41	GO:0008889: glycerophosphodiester phosphodiesterase activity	5.06E-03
42	GO:0003743: translation initiation factor activity	5.09E-03
43	GO:0003746: translation elongation factor activity	5.30E-03
44	GO:0001055: RNA polymerase II activity	5.68E-03
45	GO:0008794: arsenate reductase (glutaredoxin) activity	6.98E-03
46	GO:0008515: sucrose transmembrane transporter activity	6.98E-03
47	GO:0001054: RNA polymerase I activity	6.98E-03
48	GO:0008559: xenobiotic-transporting ATPase activity	6.98E-03
49	GO:0001056: RNA polymerase III activity	7.68E-03
50	GO:0004089: carbonate dehydratase activity	8.39E-03
51	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.22E-03
52	GO:0008146: sulfotransferase activity	9.90E-03
53	GO:0051119: sugar transmembrane transporter activity	9.90E-03
54	GO:0003712: transcription cofactor activity	9.90E-03
55	GO:0051536: iron-sulfur cluster binding	1.15E-02
56	GO:0043130: ubiquitin binding	1.15E-02
57	GO:0043424: protein histidine kinase binding	1.23E-02
58	GO:0003779: actin binding	1.28E-02
59	GO:0004298: threonine-type endopeptidase activity	1.32E-02
60	GO:0004872: receptor activity	2.07E-02
61	GO:0004518: nuclease activity	2.28E-02
62	GO:0003684: damaged DNA binding	2.49E-02
63	GO:0008483: transaminase activity	2.60E-02
64	GO:0015250: water channel activity	2.82E-02
65	GO:0005515: protein binding	3.32E-02
66	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.41E-02
67	GO:0004222: metalloendopeptidase activity	3.66E-02
68	GO:0050897: cobalt ion binding	3.78E-02
69	GO:0003697: single-stranded DNA binding	4.03E-02

Rank	GO Term	Adjusted P value
1	GO:0035098: ESC/E(Z) complex	0.00E+00
2	GO:0005840: ribosome	2.72E-35
3	GO:0022625: cytosolic large ribosomal subunit	8.74E-26
4	GO:0022626: cytosolic ribosome	3.24E-16
5	GO:0022627: cytosolic small ribosomal subunit	3.47E-16
6	GO:0005737: cytoplasm	1.85E-08
7	GO:0015934: large ribosomal subunit	2.69E-06
8	GO:0005774: vacuolar membrane	4.60E-06
9	GO:0009506: plasmodesma	1.61E-05
10	GO:0005829: cytosol	2.10E-05
11	GO:0005750: mitochondrial respiratory chain complex III	3.31E-05
12	GO:0005773: vacuole	3.67E-05
13	GO:0005730: nucleolus	1.52E-04
14	GO:0005732: small nucleolar ribonucleoprotein complex	3.65E-04
15	GO:0005740: mitochondrial envelope	4.00E-04
16	GO:0035145: exon-exon junction complex	4.90E-04
17	GO:0005697: telomerase holoenzyme complex	4.90E-04
18	GO:0035102: PRC1 complex	4.90E-04
19	GO:0005665: DNA-directed RNA polymerase II, core complex	5.30E-04
20	GO:0005753: mitochondrial proton-transporting ATP synthase complex	7.56E-04
21	GO:0000419: DNA-directed RNA polymerase V complex	8.40E-04
22	GO:0045271: respiratory chain complex I	1.02E-03
23	GO:1990726: Lsm1-7-Pat1 complex	1.14E-03
24	GO:0005775: vacuolar lumen	1.14E-03
25	GO:0015629: actin cytoskeleton	1.33E-03
26	GO:0005776: autophagosome	1.51E-03
27	GO:0008250: oligosaccharyltransferase complex	1.93E-03
28	GO:0005746: mitochondrial respiratory chain	1.93E-03
29	GO:0005771: multivesicular body	2.38E-03
30	GO:0030904: retromer complex	2.38E-03
31	GO:0016020: membrane	3.71E-03
32	GO:0000421: autophagosome membrane	3.90E-03
33	GO:0045273: respiratory chain complex II	3.90E-03
34	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.90E-03
35	GO:0005688: U6 snRNP	3.90E-03
36	GO:0046540: U4/U6 x U5 tri-snRNP complex	4.47E-03
37	GO:0046930: pore complex	4.47E-03
38	GO:0008180: COP9 signalosome	5.06E-03
39	GO:0005736: DNA-directed RNA polymerase I complex	5.06E-03
40	GO:0005666: DNA-directed RNA polymerase III complex	5.68E-03
41	GO:0071011: precatalytic spliceosome	5.68E-03
42	GO:0000418: DNA-directed RNA polymerase IV complex	6.32E-03
43	GO:0005852: eukaryotic translation initiation factor 3 complex	6.98E-03
44	GO:0071013: catalytic step 2 spliceosome	6.98E-03
45	GO:0019013: viral nucleocapsid	8.39E-03
46	GO:0005938: cell cortex	8.39E-03
47	GO:0009508: plastid chromosome	8.39E-03
48	GO:0031966: mitochondrial membrane	8.58E-03
49	GO:0000502: proteasome complex	9.22E-03
50	GO:0005777: peroxisome	1.06E-02
51	GO:0005747: mitochondrial respiratory chain complex I	1.13E-02
52	GO:0005758: mitochondrial intermembrane space	1.15E-02
53	GO:0005618: cell wall	1.18E-02
54	GO:0070469: respiratory chain	1.23E-02
55	GO:0015935: small ribosomal subunit	1.32E-02
56	GO:0005741: mitochondrial outer membrane	1.32E-02
57	GO:0005839: proteasome core complex	1.32E-02
58	GO:0031410: cytoplasmic vesicle	1.40E-02
59	GO:0005886: plasma membrane	1.72E-02
60	GO:0009295: nucleoid	2.60E-02
61	GO:0009507: chloroplast	2.78E-02
62	GO:0000932: P-body	2.82E-02
63	GO:0005788: endoplasmic reticulum lumen	2.94E-02
64	GO:0009536: plastid	3.33E-02
65	GO:0000325: plant-type vacuole	3.78E-02
66	GO:0031902: late endosome membrane	4.56E-02