co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:1905177: tracheary element differentiation	0.00E+00
3	GO:0010412: mannan metabolic process	0.00E+00
4	GO:0051569: regulation of histone H3-K4 methylation	0.00E+00
5	GO:0031338: regulation of vesicle fusion	7.75E-05
6	GO:0097298: regulation of nucleus size	7.75E-05
7	GO:0044210: 'de novo' CTP biosynthetic process	3.11E-04
8	GO:0010623: programmed cell death involved in cell development	3.11E-04
9	GO:0090630: activation of GTPase activity	3.11E-04
10	GO:0010321: regulation of vegetative phase change	4.49E-04
11	GO:1901000: regulation of response to salt stress	4.49E-04
12	GO:0043481: anthocyanin accumulation in tissues in response to UV light	4.49E-04
13	GO:0030100: regulation of endocytosis	4.49E-04
14	GO:0009058: biosynthetic process	4.91E-04
15	GO:0046345: abscisic acid catabolic process	5.98E-04
16	GO:0015689: molybdate ion transport	5.98E-04
17	GO:0046355: mannan catabolic process	5.98E-04
18	GO:0022622: root system development	5.98E-04
19	GO:0010508: positive regulation of autophagy	5.98E-04
20	GO:0006461: protein complex assembly	7.57E-04
21	GO:0009823: cytokinin catabolic process	7.57E-04
22	GO:0006656: phosphatidylcholine biosynthetic process	7.57E-04
23	GO:0009913: epidermal cell differentiation	9.24E-04
24	GO:0047484: regulation of response to osmotic stress	9.24E-04
25	GO:0071470: cellular response to osmotic stress	1.10E-03
26	GO:0009631: cold acclimation	1.18E-03
27	GO:0016051: carbohydrate biosynthetic process	1.29E-03
28	GO:0010103: stomatal complex morphogenesis	1.29E-03
29	GO:0032880: regulation of protein localization	1.29E-03
30	GO:0009690: cytokinin metabolic process	1.48E-03
31	GO:0009704: de-etiolation	1.48E-03
32	GO:0035265: organ growth	1.48E-03
33	GO:0006997: nucleus organization	1.69E-03
34	GO:0009827: plant-type cell wall modification	1.69E-03
35	GO:0042761: very long-chain fatty acid biosynthetic process	2.14E-03
36	GO:0016571: histone methylation	2.14E-03
37	GO:0006949: syncytium formation	2.37E-03
38	GO:0043086: negative regulation of catalytic activity	2.60E-03
39	GO:0048765: root hair cell differentiation	2.61E-03
40	GO:0006979: response to oxidative stress	2.80E-03
41	GO:2000012: regulation of auxin polar transport	3.12E-03
42	GO:0010102: lateral root morphogenesis	3.12E-03
43	GO:0010025: wax biosynthetic process	3.94E-03
44	GO:0006289: nucleotide-excision repair	4.23E-03
45	GO:0007017: microtubule-based process	4.52E-03
46	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.45E-03
47	GO:0010089: xylem development	5.77E-03
48	GO:0006284: base-excision repair	5.77E-03
49	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	6.00E-03
50	GO:0070417: cellular response to cold	6.10E-03
51	GO:0008284: positive regulation of cell proliferation	6.10E-03
52	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.10E-03
53	GO:0042335: cuticle development	6.44E-03
54	GO:0009958: positive gravitropism	6.78E-03
55	GO:0010268: brassinosteroid homeostasis	6.78E-03
56	GO:0048825: cotyledon development	7.49E-03
57	GO:0016132: brassinosteroid biosynthetic process	7.85E-03
58	GO:0010583: response to cyclopentenone	8.22E-03
59	GO:0009639: response to red or far red light	8.97E-03
60	GO:0009828: plant-type cell wall loosening	8.97E-03
61	GO:0006310: DNA recombination	8.97E-03
62	GO:0016125: sterol metabolic process	8.97E-03
63	GO:0080167: response to karrikin	1.03E-02
64	GO:0048527: lateral root development	1.36E-02
65	GO:0007568: aging	1.36E-02
66	GO:0009910: negative regulation of flower development	1.36E-02
67	GO:0030154: cell differentiation	1.42E-02
68	GO:0006281: DNA repair	1.52E-02
69	GO:0006897: endocytosis	1.64E-02
70	GO:0006631: fatty acid metabolic process	1.64E-02
71	GO:0015031: protein transport	1.72E-02
72	GO:0010114: response to red light	1.73E-02
73	GO:0009640: photomorphogenesis	1.73E-02
74	GO:0009409: response to cold	1.87E-02
75	GO:0009664: plant-type cell wall organization	2.04E-02
76	GO:0009585: red, far-red light phototransduction	2.14E-02
77	GO:0009908: flower development	2.45E-02
78	GO:0009416: response to light stimulus	2.71E-02
79	GO:0006351: transcription, DNA-templated	2.84E-02
80	GO:0009742: brassinosteroid mediated signaling pathway	2.87E-02
81	GO:0045893: positive regulation of transcription, DNA-templated	3.11E-02
82	GO:0009845: seed germination	3.42E-02
83	GO:0016310: phosphorylation	3.92E-02
84	GO:0007623: circadian rhythm	4.06E-02
85	GO:0045490: pectin catabolic process	4.06E-02
86	GO:0009739: response to gibberellin	4.40E-02
87	GO:0007166: cell surface receptor signaling pathway	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	3.03E-06
2	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	7.75E-05
3	GO:0004105: choline-phosphate cytidylyltransferase activity	7.75E-05
4	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.85E-04
5	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	3.11E-04
6	GO:0017108: 5'-flap endonuclease activity	3.11E-04
7	GO:0016985: mannan endo-1,4-beta-mannosidase activity	5.98E-04
8	GO:0019104: DNA N-glycosylase activity	5.98E-04
9	GO:0015098: molybdate ion transmembrane transporter activity	5.98E-04
10	GO:0000993: RNA polymerase II core binding	5.98E-04
11	GO:0019139: cytokinin dehydrogenase activity	7.57E-04
12	GO:0017137: Rab GTPase binding	7.57E-04
13	GO:0016209: antioxidant activity	1.48E-03
14	GO:0015020: glucuronosyltransferase activity	2.37E-03
15	GO:0003924: GTPase activity	2.51E-03
16	GO:0005543: phospholipid binding	2.61E-03
17	GO:0004022: alcohol dehydrogenase (NAD) activity	3.12E-03
18	GO:0008083: growth factor activity	3.38E-03
19	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.38E-03
20	GO:0046910: pectinesterase inhibitor activity	5.01E-03
21	GO:0030570: pectate lyase activity	5.45E-03
22	GO:0001085: RNA polymerase II transcription factor binding	6.78E-03
23	GO:0004518: nuclease activity	8.22E-03
24	GO:0003684: damaged DNA binding	8.97E-03
25	GO:0005200: structural constituent of cytoskeleton	9.36E-03
26	GO:0005525: GTP binding	9.77E-03
27	GO:0008270: zinc ion binding	1.04E-02
28	GO:0061630: ubiquitin protein ligase activity	1.08E-02
29	GO:0008375: acetylglucosaminyltransferase activity	1.10E-02
30	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.19E-02
31	GO:0005096: GTPase activator activity	1.27E-02
32	GO:0004222: metalloendopeptidase activity	1.31E-02
33	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.36E-02
34	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.36E-02
35	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.45E-02
36	GO:0003993: acid phosphatase activity	1.49E-02
37	GO:0016757: transferase activity, transferring glycosyl groups	1.76E-02
38	GO:0008289: lipid binding	2.12E-02
39	GO:0003690: double-stranded DNA binding	2.19E-02
40	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.47E-02
41	GO:0016874: ligase activity	2.64E-02
42	GO:0016758: transferase activity, transferring hexosyl groups	3.17E-02
43	GO:0043565: sequence-specific DNA binding	3.22E-02
44	GO:0016829: lyase activity	3.42E-02
45	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.54E-02
46	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.57E-02
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0031357: integral component of chloroplast inner membrane	1.85E-04
3	GO:0005652: nuclear lamina	3.11E-04
4	GO:0016593: Cdc73/Paf1 complex	5.98E-04
5	GO:0005798: Golgi-associated vesicle	9.24E-04
6	GO:0034399: nuclear periphery	1.48E-03
7	GO:0045298: tubulin complex	1.91E-03
8	GO:0031012: extracellular matrix	3.12E-03
9	GO:0005769: early endosome	3.94E-03
10	GO:0005905: clathrin-coated pit	4.82E-03
11	GO:0005615: extracellular space	6.00E-03
12	GO:0030136: clathrin-coated vesicle	6.10E-03
13	GO:0031965: nuclear membrane	7.49E-03
14	GO:0005622: intracellular	1.08E-02
15	GO:0005667: transcription factor complex	1.10E-02
16	GO:0016607: nuclear speck	2.47E-02
17	GO:0012505: endomembrane system	2.69E-02
18	GO:0005654: nucleoplasm	3.17E-02
19	GO:0005794: Golgi apparatus	3.31E-02
20	GO:0031225: anchored component of membrane	4.21E-02
21	GO:0005802: trans-Golgi network	4.33E-02
22	GO:0005768: endosome	4.91E-02
23	GO:0046658: anchored component of plasma membrane	4.95E-02