co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
2	GO:0015882: L-ascorbic acid transport	0.00E+00
3	GO:0010206: photosystem II repair	2.01E-06
4	GO:0051775: response to redox state	8.86E-06
5	GO:0010028: xanthophyll cycle	8.86E-06
6	GO:0006729: tetrahydrobiopterin biosynthetic process	2.38E-05
7	GO:0019252: starch biosynthetic process	2.75E-05
8	GO:0005977: glycogen metabolic process	4.33E-05
9	GO:0018298: protein-chromophore linkage	6.31E-05
10	GO:0071484: cellular response to light intensity	6.64E-05
11	GO:0006107: oxaloacetate metabolic process	6.64E-05
12	GO:0006734: NADH metabolic process	9.27E-05
13	GO:0010021: amylopectin biosynthetic process	9.27E-05
14	GO:0050665: hydrogen peroxide biosynthetic process	1.52E-04
15	GO:0006096: glycolytic process	1.81E-04
16	GO:0009854: oxidative photosynthetic carbon pathway	1.85E-04
17	GO:0009769: photosynthesis, light harvesting in photosystem II	2.19E-04
18	GO:0009645: response to low light intensity stimulus	2.19E-04
19	GO:0016559: peroxisome fission	2.54E-04
20	GO:0098656: anion transmembrane transport	3.29E-04
21	GO:0006098: pentose-phosphate shunt	3.29E-04
22	GO:0009821: alkaloid biosynthetic process	3.29E-04
23	GO:0005983: starch catabolic process	4.90E-04
24	GO:0006094: gluconeogenesis	5.33E-04
25	GO:0006108: malate metabolic process	5.33E-04
26	GO:0006006: glucose metabolic process	5.33E-04
27	GO:0010020: chloroplast fission	5.76E-04
28	GO:0019253: reductive pentose-phosphate cycle	5.76E-04
29	GO:0010207: photosystem II assembly	5.76E-04
30	GO:0005975: carbohydrate metabolic process	6.71E-04
31	GO:0009768: photosynthesis, light harvesting in photosystem I	7.58E-04
32	GO:0009269: response to desiccation	8.05E-04
33	GO:0016311: dephosphorylation	1.86E-03
34	GO:0010218: response to far red light	2.05E-03
35	GO:0009637: response to blue light	2.25E-03
36	GO:0006099: tricarboxylic acid cycle	2.32E-03
37	GO:0010114: response to red light	2.67E-03
38	GO:0009644: response to high light intensity	2.81E-03
39	GO:0009058: biosynthetic process	5.01E-03
40	GO:0007623: circadian rhythm	6.03E-03
41	GO:0006470: protein dephosphorylation	6.61E-03
42	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.71E-03
43	GO:0015979: photosynthesis	1.04E-02
44	GO:0006281: DNA repair	1.25E-02
45	GO:0009735: response to cytokinin	1.76E-02
46	GO:0009416: response to light stimulus	1.88E-02
47	GO:0055114: oxidation-reduction process	2.94E-02
48	GO:0042742: defense response to bacterium	3.10E-02
49	GO:0009409: response to cold	3.85E-02
50	GO:0046686: response to cadmium ion	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
2	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
3	GO:0050308: sugar-phosphatase activity	8.86E-06
4	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	8.86E-06
5	GO:0019203: carbohydrate phosphatase activity	8.86E-06
6	GO:0008746: NAD(P)+ transhydrogenase activity	8.86E-06
7	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.38E-05
8	GO:0019156: isoamylase activity	2.38E-05
9	GO:0003913: DNA photolyase activity	4.33E-05
10	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.33E-05
11	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	6.64E-05
12	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	6.64E-05
13	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	6.64E-05
14	GO:0009011: starch synthase activity	9.27E-05
15	GO:0008891: glycolate oxidase activity	9.27E-05
16	GO:2001070: starch binding	1.52E-04
17	GO:0004332: fructose-bisphosphate aldolase activity	1.52E-04
18	GO:0004556: alpha-amylase activity	1.52E-04
19	GO:0016615: malate dehydrogenase activity	1.52E-04
20	GO:0030060: L-malate dehydrogenase activity	1.85E-04
21	GO:0009881: photoreceptor activity	2.19E-04
22	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.29E-04
23	GO:0016844: strictosidine synthase activity	3.67E-04
24	GO:0004565: beta-galactosidase activity	5.33E-04
25	GO:0005315: inorganic phosphate transmembrane transporter activity	5.33E-04
26	GO:0031409: pigment binding	6.66E-04
27	GO:0008514: organic anion transmembrane transporter activity	9.51E-04
28	GO:0010181: FMN binding	1.16E-03
29	GO:0016168: chlorophyll binding	1.67E-03
30	GO:0003993: acid phosphatase activity	2.32E-03
31	GO:0050661: NADP binding	2.46E-03
32	GO:0051287: NAD binding	3.03E-03
33	GO:0016491: oxidoreductase activity	4.71E-03
34	GO:0004252: serine-type endopeptidase activity	5.19E-03
35	GO:0008017: microtubule binding	6.22E-03
36	GO:0042802: identical protein binding	7.11E-03
37	GO:0003924: GTPase activity	1.25E-02
38	GO:0030246: carbohydrate binding	2.32E-02
39	GO:0005525: GTP binding	2.67E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.41E-11
2	GO:0009579: thylakoid	2.48E-07
3	GO:0009941: chloroplast envelope	2.77E-06
4	GO:0048046: apoplast	2.50E-05
5	GO:0009517: PSII associated light-harvesting complex II	9.27E-05
6	GO:0031977: thylakoid lumen	1.00E-04
7	GO:0009535: chloroplast thylakoid membrane	1.23E-04
8	GO:0009534: chloroplast thylakoid	2.01E-04
9	GO:0010287: plastoglobule	2.63E-04
10	GO:0009543: chloroplast thylakoid lumen	2.77E-04
11	GO:0030095: chloroplast photosystem II	5.76E-04
12	GO:0030076: light-harvesting complex	6.20E-04
13	GO:0009570: chloroplast stroma	6.98E-04
14	GO:0009522: photosystem I	1.16E-03
15	GO:0009523: photosystem II	1.21E-03
16	GO:0022626: cytosolic ribosome	1.72E-03
17	GO:0009707: chloroplast outer membrane	1.92E-03
18	GO:0005777: peroxisome	2.06E-03
19	GO:0009706: chloroplast inner membrane	4.15E-03
20	GO:0005618: cell wall	1.42E-02
21	GO:0005773: vacuole	1.91E-02
22	GO:0009536: plastid	3.59E-02
23	GO:0009505: plant-type cell wall	3.64E-02
24	GO:0009506: plasmodesma	4.74E-02