GO Enrichment Analysis of Co-expressed Genes with
AT1G77930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019439: aromatic compound catabolic process | 0.00E+00 |
| 2 | GO:0009661: chromoplast organization | 0.00E+00 |
| 3 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 4 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 5 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 6 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 7 | GO:0098586: cellular response to virus | 0.00E+00 |
| 8 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 9 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 10 | GO:0042853: L-alanine catabolic process | 4.01E-07 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 2.25E-06 |
| 12 | GO:0009853: photorespiration | 4.75E-06 |
| 13 | GO:0010190: cytochrome b6f complex assembly | 1.77E-05 |
| 14 | GO:0015979: photosynthesis | 3.50E-05 |
| 15 | GO:0055114: oxidation-reduction process | 5.45E-05 |
| 16 | GO:0018298: protein-chromophore linkage | 8.45E-05 |
| 17 | GO:0031426: polycistronic mRNA processing | 8.61E-05 |
| 18 | GO:0010362: negative regulation of anion channel activity by blue light | 8.61E-05 |
| 19 | GO:0019285: glycine betaine biosynthetic process from choline | 8.61E-05 |
| 20 | GO:0019646: aerobic electron transport chain | 8.61E-05 |
| 21 | GO:0010207: photosystem II assembly | 1.86E-04 |
| 22 | GO:0009644: response to high light intensity | 1.92E-04 |
| 23 | GO:0080005: photosystem stoichiometry adjustment | 2.04E-04 |
| 24 | GO:0048314: embryo sac morphogenesis | 2.04E-04 |
| 25 | GO:0030187: melatonin biosynthetic process | 2.04E-04 |
| 26 | GO:0000256: allantoin catabolic process | 2.04E-04 |
| 27 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.04E-04 |
| 28 | GO:0046741: transport of virus in host, tissue to tissue | 2.04E-04 |
| 29 | GO:0042548: regulation of photosynthesis, light reaction | 2.04E-04 |
| 30 | GO:0010136: ureide catabolic process | 3.42E-04 |
| 31 | GO:0009405: pathogenesis | 3.42E-04 |
| 32 | GO:0006013: mannose metabolic process | 3.42E-04 |
| 33 | GO:0002230: positive regulation of defense response to virus by host | 3.42E-04 |
| 34 | GO:1901672: positive regulation of systemic acquired resistance | 3.42E-04 |
| 35 | GO:0046739: transport of virus in multicellular host | 4.92E-04 |
| 36 | GO:0043572: plastid fission | 4.92E-04 |
| 37 | GO:0071484: cellular response to light intensity | 4.92E-04 |
| 38 | GO:0010239: chloroplast mRNA processing | 4.92E-04 |
| 39 | GO:0006145: purine nucleobase catabolic process | 4.92E-04 |
| 40 | GO:0009791: post-embryonic development | 6.01E-04 |
| 41 | GO:0009902: chloroplast relocation | 6.55E-04 |
| 42 | GO:0006545: glycine biosynthetic process | 6.55E-04 |
| 43 | GO:0031935: regulation of chromatin silencing | 6.55E-04 |
| 44 | GO:0007623: circadian rhythm | 8.20E-04 |
| 45 | GO:0010117: photoprotection | 8.29E-04 |
| 46 | GO:0031365: N-terminal protein amino acid modification | 8.29E-04 |
| 47 | GO:0006282: regulation of DNA repair | 8.29E-04 |
| 48 | GO:0034052: positive regulation of plant-type hypersensitive response | 8.29E-04 |
| 49 | GO:0016120: carotene biosynthetic process | 8.29E-04 |
| 50 | GO:0009816: defense response to bacterium, incompatible interaction | 9.62E-04 |
| 51 | GO:0009643: photosynthetic acclimation | 1.01E-03 |
| 52 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.01E-03 |
| 53 | GO:0042372: phylloquinone biosynthetic process | 1.20E-03 |
| 54 | GO:0071470: cellular response to osmotic stress | 1.20E-03 |
| 55 | GO:0009645: response to low light intensity stimulus | 1.41E-03 |
| 56 | GO:0048528: post-embryonic root development | 1.41E-03 |
| 57 | GO:0034599: cellular response to oxidative stress | 1.54E-03 |
| 58 | GO:0046686: response to cadmium ion | 1.61E-03 |
| 59 | GO:0050821: protein stabilization | 1.63E-03 |
| 60 | GO:0009642: response to light intensity | 1.63E-03 |
| 61 | GO:0071482: cellular response to light stimulus | 1.86E-03 |
| 62 | GO:0009657: plastid organization | 1.86E-03 |
| 63 | GO:0006783: heme biosynthetic process | 2.10E-03 |
| 64 | GO:0048507: meristem development | 2.10E-03 |
| 65 | GO:1900426: positive regulation of defense response to bacterium | 2.35E-03 |
| 66 | GO:0009638: phototropism | 2.35E-03 |
| 67 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.35E-03 |
| 68 | GO:0045036: protein targeting to chloroplast | 2.61E-03 |
| 69 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.61E-03 |
| 70 | GO:0009773: photosynthetic electron transport in photosystem I | 2.87E-03 |
| 71 | GO:0009767: photosynthetic electron transport chain | 3.43E-03 |
| 72 | GO:0005986: sucrose biosynthetic process | 3.43E-03 |
| 73 | GO:0010020: chloroplast fission | 3.73E-03 |
| 74 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.98E-03 |
| 75 | GO:0006825: copper ion transport | 4.98E-03 |
| 76 | GO:0051302: regulation of cell division | 4.98E-03 |
| 77 | GO:0008299: isoprenoid biosynthetic process | 4.98E-03 |
| 78 | GO:0051321: meiotic cell cycle | 5.32E-03 |
| 79 | GO:0006366: transcription from RNA polymerase II promoter | 5.32E-03 |
| 80 | GO:0006413: translational initiation | 5.76E-03 |
| 81 | GO:0035556: intracellular signal transduction | 6.66E-03 |
| 82 | GO:0010118: stomatal movement | 7.10E-03 |
| 83 | GO:0042335: cuticle development | 7.10E-03 |
| 84 | GO:0010468: regulation of gene expression | 7.37E-03 |
| 85 | GO:0006662: glycerol ether metabolic process | 7.48E-03 |
| 86 | GO:0000302: response to reactive oxygen species | 8.66E-03 |
| 87 | GO:0031047: gene silencing by RNA | 9.07E-03 |
| 88 | GO:0016032: viral process | 9.07E-03 |
| 89 | GO:0009658: chloroplast organization | 9.57E-03 |
| 90 | GO:0051607: defense response to virus | 1.08E-02 |
| 91 | GO:0001666: response to hypoxia | 1.12E-02 |
| 92 | GO:0046777: protein autophosphorylation | 1.27E-02 |
| 93 | GO:0000160: phosphorelay signal transduction system | 1.40E-02 |
| 94 | GO:0045454: cell redox homeostasis | 1.42E-02 |
| 95 | GO:0007568: aging | 1.50E-02 |
| 96 | GO:0000724: double-strand break repair via homologous recombination | 1.55E-02 |
| 97 | GO:0009637: response to blue light | 1.60E-02 |
| 98 | GO:0006281: DNA repair | 1.76E-02 |
| 99 | GO:0010114: response to red light | 1.92E-02 |
| 100 | GO:0009636: response to toxic substance | 2.08E-02 |
| 101 | GO:0031347: regulation of defense response | 2.19E-02 |
| 102 | GO:0006364: rRNA processing | 2.37E-02 |
| 103 | GO:0006417: regulation of translation | 2.55E-02 |
| 104 | GO:0009626: plant-type hypersensitive response | 2.79E-02 |
| 105 | GO:0009735: response to cytokinin | 2.85E-02 |
| 106 | GO:0016569: covalent chromatin modification | 2.92E-02 |
| 107 | GO:0009553: embryo sac development | 2.98E-02 |
| 108 | GO:0009624: response to nematode | 3.04E-02 |
| 109 | GO:0006396: RNA processing | 3.11E-02 |
| 110 | GO:0009416: response to light stimulus | 3.12E-02 |
| 111 | GO:0009058: biosynthetic process | 3.71E-02 |
| 112 | GO:0055085: transmembrane transport | 3.95E-02 |
| 113 | GO:0006457: protein folding | 4.03E-02 |
| 114 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019133: choline monooxygenase activity | 0.00E+00 |
| 2 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 7 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 0.00E+00 |
| 8 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 9 | GO:0016708: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor | 0.00E+00 |
| 10 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 11 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 12 | GO:0008453: alanine-glyoxylate transaminase activity | 1.77E-08 |
| 13 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.53E-06 |
| 14 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.65E-06 |
| 15 | GO:0004856: xylulokinase activity | 8.61E-05 |
| 16 | GO:0030941: chloroplast targeting sequence binding | 8.61E-05 |
| 17 | GO:0035671: enone reductase activity | 8.61E-05 |
| 18 | GO:0004008: copper-exporting ATPase activity | 8.61E-05 |
| 19 | GO:0008883: glutamyl-tRNA reductase activity | 2.04E-04 |
| 20 | GO:0050307: sucrose-phosphate phosphatase activity | 3.42E-04 |
| 21 | GO:0030267: glyoxylate reductase (NADP) activity | 3.42E-04 |
| 22 | GO:0070402: NADPH binding | 3.42E-04 |
| 23 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.42E-04 |
| 24 | GO:0003913: DNA photolyase activity | 3.42E-04 |
| 25 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.42E-04 |
| 26 | GO:0009882: blue light photoreceptor activity | 4.92E-04 |
| 27 | GO:0048027: mRNA 5'-UTR binding | 4.92E-04 |
| 28 | GO:0016851: magnesium chelatase activity | 4.92E-04 |
| 29 | GO:0008080: N-acetyltransferase activity | 5.23E-04 |
| 30 | GO:0016853: isomerase activity | 5.62E-04 |
| 31 | GO:0051861: glycolipid binding | 6.55E-04 |
| 32 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.29E-04 |
| 33 | GO:0016168: chlorophyll binding | 9.62E-04 |
| 34 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.20E-03 |
| 35 | GO:0004559: alpha-mannosidase activity | 1.20E-03 |
| 36 | GO:0008235: metalloexopeptidase activity | 1.41E-03 |
| 37 | GO:0005375: copper ion transmembrane transporter activity | 1.86E-03 |
| 38 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.04E-03 |
| 39 | GO:0045309: protein phosphorylated amino acid binding | 2.35E-03 |
| 40 | GO:0019904: protein domain specific binding | 2.87E-03 |
| 41 | GO:0004177: aminopeptidase activity | 2.87E-03 |
| 42 | GO:0009055: electron carrier activity | 3.29E-03 |
| 43 | GO:0005506: iron ion binding | 3.35E-03 |
| 44 | GO:0000155: phosphorelay sensor kinase activity | 3.43E-03 |
| 45 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.43E-03 |
| 46 | GO:0031409: pigment binding | 4.34E-03 |
| 47 | GO:0003954: NADH dehydrogenase activity | 4.65E-03 |
| 48 | GO:0001046: core promoter sequence-specific DNA binding | 4.65E-03 |
| 49 | GO:0030170: pyridoxal phosphate binding | 4.98E-03 |
| 50 | GO:0016887: ATPase activity | 5.24E-03 |
| 51 | GO:0004176: ATP-dependent peptidase activity | 5.32E-03 |
| 52 | GO:0022891: substrate-specific transmembrane transporter activity | 6.01E-03 |
| 53 | GO:0003727: single-stranded RNA binding | 6.36E-03 |
| 54 | GO:0047134: protein-disulfide reductase activity | 6.73E-03 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 7.87E-03 |
| 56 | GO:0010181: FMN binding | 7.87E-03 |
| 57 | GO:0048038: quinone binding | 8.66E-03 |
| 58 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.48E-03 |
| 59 | GO:0050897: cobalt ion binding | 1.50E-02 |
| 60 | GO:0030145: manganese ion binding | 1.50E-02 |
| 61 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.50E-02 |
| 62 | GO:0050661: NADP binding | 1.76E-02 |
| 63 | GO:0004364: glutathione transferase activity | 1.86E-02 |
| 64 | GO:0043621: protein self-association | 2.02E-02 |
| 65 | GO:0016491: oxidoreductase activity | 2.16E-02 |
| 66 | GO:0051287: NAD binding | 2.19E-02 |
| 67 | GO:0031625: ubiquitin protein ligase binding | 2.55E-02 |
| 68 | GO:0005515: protein binding | 2.75E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 3.11E-02 |
| 70 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.64E-02 |
| 71 | GO:0016829: lyase activity | 3.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.77E-25 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.08E-14 |
| 3 | GO:0009570: chloroplast stroma | 9.32E-10 |
| 4 | GO:0009534: chloroplast thylakoid | 1.34E-08 |
| 5 | GO:0009941: chloroplast envelope | 5.57E-05 |
| 6 | GO:0009782: photosystem I antenna complex | 8.61E-05 |
| 7 | GO:0031977: thylakoid lumen | 1.53E-04 |
| 8 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.04E-04 |
| 9 | GO:0031969: chloroplast membrane | 2.70E-04 |
| 10 | GO:0042651: thylakoid membrane | 2.91E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 3.42E-04 |
| 12 | GO:0010287: plastoglobule | 5.13E-04 |
| 13 | GO:0009707: chloroplast outer membrane | 1.18E-03 |
| 14 | GO:0031359: integral component of chloroplast outer membrane | 1.41E-03 |
| 15 | GO:0042644: chloroplast nucleoid | 2.10E-03 |
| 16 | GO:0005747: mitochondrial respiratory chain complex I | 3.09E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 3.59E-03 |
| 18 | GO:0030076: light-harvesting complex | 4.03E-03 |
| 19 | GO:0043234: protein complex | 4.34E-03 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 4.49E-03 |
| 21 | GO:0045271: respiratory chain complex I | 4.98E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 4.98E-03 |
| 23 | GO:0048046: apoplast | 7.12E-03 |
| 24 | GO:0005777: peroxisome | 7.41E-03 |
| 25 | GO:0009579: thylakoid | 7.80E-03 |
| 26 | GO:0009523: photosystem II | 8.26E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 8.26E-03 |
| 28 | GO:0010319: stromule | 1.03E-02 |
| 29 | GO:0031966: mitochondrial membrane | 2.25E-02 |
| 30 | GO:0005759: mitochondrial matrix | 4.20E-02 |