co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0006811: ion transport	5.41E-05
4	GO:0035435: phosphate ion transmembrane transport	8.60E-05
5	GO:0030974: thiamine pyrophosphate transport	2.27E-04
6	GO:0009865: pollen tube adhesion	2.27E-04
7	GO:0006680: glucosylceramide catabolic process	2.27E-04
8	GO:0009609: response to symbiotic bacterium	2.27E-04
9	GO:0046938: phytochelatin biosynthetic process	2.27E-04
10	GO:0051180: vitamin transport	2.27E-04
11	GO:0009873: ethylene-activated signaling pathway	2.97E-04
12	GO:0010200: response to chitin	4.55E-04
13	GO:0052544: defense response by callose deposition in cell wall	4.83E-04
14	GO:1901679: nucleotide transmembrane transport	5.05E-04
15	GO:0010507: negative regulation of autophagy	5.05E-04
16	GO:0015709: thiosulfate transport	5.05E-04
17	GO:0071422: succinate transmembrane transport	5.05E-04
18	GO:0031407: oxylipin metabolic process	5.05E-04
19	GO:0010289: homogalacturonan biosynthetic process	5.05E-04
20	GO:0006898: receptor-mediated endocytosis	5.05E-04
21	GO:0015893: drug transport	5.05E-04
22	GO:0009611: response to wounding	6.01E-04
23	GO:0018107: peptidyl-threonine phosphorylation	6.27E-04
24	GO:0070588: calcium ion transmembrane transport	7.89E-04
25	GO:0016045: detection of bacterium	8.21E-04
26	GO:0010359: regulation of anion channel activity	8.21E-04
27	GO:0090630: activation of GTPase activity	8.21E-04
28	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	8.21E-04
29	GO:0080121: AMP transport	8.21E-04
30	GO:0046786: viral replication complex formation and maintenance	8.21E-04
31	GO:0042344: indole glucosinolate catabolic process	8.21E-04
32	GO:0044210: 'de novo' CTP biosynthetic process	8.21E-04
33	GO:0006839: mitochondrial transport	8.38E-04
34	GO:0009695: jasmonic acid biosynthetic process	1.06E-03
35	GO:0010371: regulation of gibberellin biosynthetic process	1.17E-03
36	GO:0015729: oxaloacetate transport	1.17E-03
37	GO:0009269: response to desiccation	1.17E-03
38	GO:0015700: arsenite transport	1.17E-03
39	GO:0031408: oxylipin biosynthetic process	1.17E-03
40	GO:0042538: hyperosmotic salinity response	1.29E-03
41	GO:0001944: vasculature development	1.38E-03
42	GO:0046345: abscisic acid catabolic process	1.56E-03
43	GO:0015689: molybdate ion transport	1.56E-03
44	GO:0022622: root system development	1.56E-03
45	GO:0015867: ATP transport	1.56E-03
46	GO:0071585: detoxification of cadmium ion	1.56E-03
47	GO:0006873: cellular ion homeostasis	1.99E-03
48	GO:0048497: maintenance of floral organ identity	1.99E-03
49	GO:0006665: sphingolipid metabolic process	1.99E-03
50	GO:0032957: inositol trisphosphate metabolic process	1.99E-03
51	GO:0009247: glycolipid biosynthetic process	1.99E-03
52	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.99E-03
53	GO:0048359: mucilage metabolic process involved in seed coat development	1.99E-03
54	GO:0071423: malate transmembrane transport	1.99E-03
55	GO:0006656: phosphatidylcholine biosynthetic process	1.99E-03
56	GO:0009414: response to water deprivation	2.21E-03
57	GO:0000302: response to reactive oxygen species	2.33E-03
58	GO:1900425: negative regulation of defense response to bacterium	2.45E-03
59	GO:0015866: ADP transport	2.45E-03
60	GO:0019760: glucosinolate metabolic process	2.82E-03
61	GO:0098655: cation transmembrane transport	2.94E-03
62	GO:0010555: response to mannitol	2.94E-03
63	GO:0009737: response to abscisic acid	3.41E-03
64	GO:1902074: response to salt	3.47E-03
65	GO:0032880: regulation of protein localization	3.47E-03
66	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.47E-03
67	GO:0009610: response to symbiotic fungus	3.47E-03
68	GO:0008272: sulfate transport	3.47E-03
69	GO:0019375: galactolipid biosynthetic process	4.02E-03
70	GO:0007155: cell adhesion	4.02E-03
71	GO:0035265: organ growth	4.02E-03
72	GO:0009409: response to cold	4.22E-03
73	GO:0015780: nucleotide-sugar transport	5.22E-03
74	GO:0098656: anion transmembrane transport	5.22E-03
75	GO:0046685: response to arsenic-containing substance	5.22E-03
76	GO:0010468: regulation of gene expression	5.54E-03
77	GO:0007346: regulation of mitotic cell cycle	5.85E-03
78	GO:0048268: clathrin coat assembly	5.85E-03
79	GO:0042761: very long-chain fatty acid biosynthetic process	5.85E-03
80	GO:2000280: regulation of root development	5.85E-03
81	GO:0009641: shade avoidance	6.51E-03
82	GO:0006631: fatty acid metabolic process	6.58E-03
83	GO:0051707: response to other organism	7.14E-03
84	GO:0018119: peptidyl-cysteine S-nitrosylation	7.20E-03
85	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.92E-03
86	GO:0045037: protein import into chloroplast stroma	7.92E-03
87	GO:0006970: response to osmotic stress	8.47E-03
88	GO:0050826: response to freezing	8.66E-03
89	GO:2000012: regulation of auxin polar transport	8.66E-03
90	GO:0009969: xyloglucan biosynthetic process	1.02E-02
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.06E-02
92	GO:0006636: unsaturated fatty acid biosynthetic process	1.10E-02
93	GO:0010025: wax biosynthetic process	1.10E-02
94	GO:0048367: shoot system development	1.18E-02
95	GO:0030150: protein import into mitochondrial matrix	1.19E-02
96	GO:0007017: microtubule-based process	1.27E-02
97	GO:0051321: meiotic cell cycle	1.36E-02
98	GO:0009624: response to nematode	1.38E-02
99	GO:0006355: regulation of transcription, DNA-templated	1.41E-02
100	GO:0018105: peptidyl-serine phosphorylation	1.42E-02
101	GO:0080092: regulation of pollen tube growth	1.45E-02
102	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.54E-02
103	GO:0000398: mRNA splicing, via spliceosome	1.59E-02
104	GO:0009751: response to salicylic acid	1.63E-02
105	GO:0010584: pollen exine formation	1.64E-02
106	GO:0048443: stamen development	1.64E-02
107	GO:0070417: cellular response to cold	1.73E-02
108	GO:0008284: positive regulation of cell proliferation	1.73E-02
109	GO:0042631: cellular response to water deprivation	1.83E-02
110	GO:0048868: pollen tube development	1.93E-02
111	GO:0010268: brassinosteroid homeostasis	1.93E-02
112	GO:0009960: endosperm development	1.93E-02
113	GO:0009958: positive gravitropism	1.93E-02
114	GO:0009790: embryo development	2.02E-02
115	GO:0009749: response to glucose	2.14E-02
116	GO:0010183: pollen tube guidance	2.14E-02
117	GO:0016132: brassinosteroid biosynthetic process	2.24E-02
118	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.24E-02
119	GO:0010193: response to ozone	2.24E-02
120	GO:0010583: response to cyclopentenone	2.35E-02
121	GO:0010150: leaf senescence	2.38E-02
122	GO:0045490: pectin catabolic process	2.38E-02
123	GO:0007623: circadian rhythm	2.38E-02
124	GO:1901657: glycosyl compound metabolic process	2.46E-02
125	GO:0009828: plant-type cell wall loosening	2.57E-02
126	GO:0016125: sterol metabolic process	2.57E-02
127	GO:0009639: response to red or far red light	2.57E-02
128	GO:0071555: cell wall organization	2.64E-02
129	GO:0007166: cell surface receptor signaling pathway	2.73E-02
130	GO:0010027: thylakoid membrane organization	2.91E-02
131	GO:0030154: cell differentiation	2.99E-02
132	GO:0010029: regulation of seed germination	3.03E-02
133	GO:0010411: xyloglucan metabolic process	3.27E-02
134	GO:0016049: cell growth	3.40E-02
135	GO:0035556: intracellular signal transduction	3.65E-02
136	GO:0048767: root hair elongation	3.65E-02
137	GO:0007568: aging	3.90E-02
138	GO:0009631: cold acclimation	3.90E-02
139	GO:0048527: lateral root development	3.90E-02
140	GO:0016051: carbohydrate biosynthetic process	4.17E-02
141	GO:0006897: endocytosis	4.71E-02
142	GO:0005975: carbohydrate metabolic process	4.82E-02
143	GO:0009744: response to sucrose	4.98E-02
144	GO:0008283: cell proliferation	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0016629: 12-oxophytodienoate reductase activity	2.41E-06
4	GO:0003883: CTP synthase activity	2.00E-05
5	GO:0004348: glucosylceramidase activity	2.27E-04
6	GO:0071992: phytochelatin transmembrane transporter activity	2.27E-04
7	GO:0090422: thiamine pyrophosphate transporter activity	2.27E-04
8	GO:0004105: choline-phosphate cytidylyltransferase activity	2.27E-04
9	GO:0046870: cadmium ion binding	2.27E-04
10	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.27E-04
11	GO:0043565: sequence-specific DNA binding	4.49E-04
12	GO:1901677: phosphate transmembrane transporter activity	5.05E-04
13	GO:0017022: myosin binding	5.05E-04
14	GO:0042389: omega-3 fatty acid desaturase activity	5.05E-04
15	GO:0017040: ceramidase activity	5.05E-04
16	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.05E-04
17	GO:0015117: thiosulfate transmembrane transporter activity	5.05E-04
18	GO:0005096: GTPase activator activity	5.62E-04
19	GO:0044212: transcription regulatory region DNA binding	6.54E-04
20	GO:0008083: growth factor activity	7.06E-04
21	GO:0046423: allene-oxide cyclase activity	8.21E-04
22	GO:0047325: inositol tetrakisphosphate 1-kinase activity	8.21E-04
23	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.21E-04
24	GO:0015141: succinate transmembrane transporter activity	8.21E-04
25	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	8.21E-04
26	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.21E-04
27	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.17E-03
28	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.17E-03
29	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.17E-03
30	GO:0015131: oxaloacetate transmembrane transporter activity	1.17E-03
31	GO:0035250: UDP-galactosyltransferase activity	1.17E-03
32	GO:0015098: molybdate ion transmembrane transporter activity	1.56E-03
33	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.99E-03
34	GO:0080122: AMP transmembrane transporter activity	1.99E-03
35	GO:0010181: FMN binding	2.03E-03
36	GO:0005347: ATP transmembrane transporter activity	2.94E-03
37	GO:0015217: ADP transmembrane transporter activity	2.94E-03
38	GO:0016621: cinnamoyl-CoA reductase activity	3.47E-03
39	GO:0015140: malate transmembrane transporter activity	3.47E-03
40	GO:0015288: porin activity	4.02E-03
41	GO:0016209: antioxidant activity	4.02E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.05E-03
43	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.16E-03
44	GO:0008308: voltage-gated anion channel activity	4.60E-03
45	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.60E-03
46	GO:0005545: 1-phosphatidylinositol binding	6.51E-03
47	GO:0015020: glucuronosyltransferase activity	6.51E-03
48	GO:0015116: sulfate transmembrane transporter activity	7.92E-03
49	GO:0005262: calcium channel activity	8.66E-03
50	GO:0015114: phosphate ion transmembrane transporter activity	8.66E-03
51	GO:0005388: calcium-transporting ATPase activity	8.66E-03
52	GO:0015266: protein channel activity	8.66E-03
53	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.42E-03
54	GO:0008146: sulfotransferase activity	1.02E-02
55	GO:0017025: TBP-class protein binding	1.02E-02
56	GO:0004707: MAP kinase activity	1.36E-02
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.39E-02
58	GO:0016301: kinase activity	1.41E-02
59	GO:0030570: pectate lyase activity	1.54E-02
60	GO:0008514: organic anion transmembrane transporter activity	1.64E-02
61	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.76E-02
62	GO:0030276: clathrin binding	1.93E-02
63	GO:0004674: protein serine/threonine kinase activity	2.04E-02
64	GO:0046910: pectinesterase inhibitor activity	2.22E-02
65	GO:0005200: structural constituent of cytoskeleton	2.68E-02
66	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.68E-02
67	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.68E-02
68	GO:0008375: acetylglucosaminyltransferase activity	3.15E-02
69	GO:0102483: scopolin beta-glucosidase activity	3.27E-02
70	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.52E-02
71	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.77E-02
72	GO:0008422: beta-glucosidase activity	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0070382: exocytic vesicle	2.27E-04
3	GO:0031357: integral component of chloroplast inner membrane	5.05E-04
4	GO:0042170: plastid membrane	5.05E-04
5	GO:0030133: transport vesicle	5.05E-04
6	GO:0045177: apical part of cell	1.17E-03
7	GO:0046658: anchored component of plasma membrane	1.20E-03
8	GO:0009527: plastid outer membrane	1.56E-03
9	GO:0005768: endosome	1.88E-03
10	GO:0005743: mitochondrial inner membrane	3.43E-03
11	GO:0031305: integral component of mitochondrial inner membrane	4.02E-03
12	GO:0046930: pore complex	4.60E-03
13	GO:0005618: cell wall	4.83E-03
14	GO:0031225: anchored component of membrane	5.08E-03
15	GO:0045298: tubulin complex	5.22E-03
16	GO:0005802: trans-Golgi network	5.32E-03
17	GO:0016604: nuclear body	5.85E-03
18	GO:0005622: intracellular	6.38E-03
19	GO:0005794: Golgi apparatus	7.91E-03
20	GO:0005938: cell cortex	8.66E-03
21	GO:0005905: clathrin-coated pit	1.36E-02
22	GO:0009706: chloroplast inner membrane	1.38E-02
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.64E-02
24	GO:0030136: clathrin-coated vesicle	1.73E-02
25	GO:0009941: chloroplast envelope	1.85E-02
26	GO:0005886: plasma membrane	3.39E-02
27	GO:0009707: chloroplast outer membrane	3.52E-02
28	GO:0009505: plant-type cell wall	3.67E-02
29	GO:0005576: extracellular region	4.06E-02
30	GO:0005874: microtubule	4.40E-02
31	GO:0090406: pollen tube	4.98E-02