co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
2	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
3	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
4	GO:0070328: triglyceride homeostasis	0.00E+00
5	GO:0051562: negative regulation of mitochondrial calcium ion concentration	0.00E+00
6	GO:0055091: phospholipid homeostasis	0.00E+00
7	GO:0045595: regulation of cell differentiation	0.00E+00
8	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
9	GO:0006970: response to osmotic stress	2.86E-05
10	GO:0006811: ion transport	3.81E-05
11	GO:0009611: response to wounding	7.70E-05
12	GO:0009415: response to water	1.64E-04
13	GO:0009737: response to abscisic acid	1.99E-04
14	GO:0009609: response to symbiotic bacterium	2.00E-04
15	GO:1902265: abscisic acid homeostasis	2.00E-04
16	GO:0051180: vitamin transport	2.00E-04
17	GO:0030974: thiamine pyrophosphate transport	2.00E-04
18	GO:0000395: mRNA 5'-splice site recognition	2.00E-04
19	GO:0009865: pollen tube adhesion	2.00E-04
20	GO:0006680: glucosylceramide catabolic process	2.00E-04
21	GO:0052544: defense response by callose deposition in cell wall	4.04E-04
22	GO:0009414: response to water deprivation	4.06E-04
23	GO:0010507: negative regulation of autophagy	4.48E-04
24	GO:0031407: oxylipin metabolic process	4.48E-04
25	GO:0010289: homogalacturonan biosynthetic process	4.48E-04
26	GO:0055088: lipid homeostasis	4.48E-04
27	GO:0015908: fatty acid transport	4.48E-04
28	GO:0006898: receptor-mediated endocytosis	4.48E-04
29	GO:0015893: drug transport	4.48E-04
30	GO:0015786: UDP-glucose transport	4.48E-04
31	GO:0009631: cold acclimation	5.04E-04
32	GO:0070588: calcium ion transmembrane transport	6.61E-04
33	GO:0090630: activation of GTPase activity	7.29E-04
34	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	7.29E-04
35	GO:0015783: GDP-fucose transport	7.29E-04
36	GO:0006011: UDP-glucose metabolic process	7.29E-04
37	GO:0006473: protein acetylation	7.29E-04
38	GO:0006598: polyamine catabolic process	7.29E-04
39	GO:0042344: indole glucosinolate catabolic process	7.29E-04
40	GO:0044210: 'de novo' CTP biosynthetic process	7.29E-04
41	GO:0016045: detection of bacterium	7.29E-04
42	GO:0010359: regulation of anion channel activity	7.29E-04
43	GO:0009409: response to cold	8.45E-04
44	GO:0055089: fatty acid homeostasis	1.04E-03
45	GO:0010371: regulation of gibberellin biosynthetic process	1.04E-03
46	GO:0072334: UDP-galactose transmembrane transport	1.04E-03
47	GO:0009226: nucleotide-sugar biosynthetic process	1.04E-03
48	GO:0009687: abscisic acid metabolic process	1.38E-03
49	GO:0051365: cellular response to potassium ion starvation	1.38E-03
50	GO:0006221: pyrimidine nucleotide biosynthetic process	1.38E-03
51	GO:0033356: UDP-L-arabinose metabolic process	1.38E-03
52	GO:1902347: response to strigolactone	1.38E-03
53	GO:0048868: pollen tube development	1.58E-03
54	GO:0048497: maintenance of floral organ identity	1.76E-03
55	GO:0051225: spindle assembly	1.76E-03
56	GO:0009247: glycolipid biosynthetic process	1.76E-03
57	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.76E-03
58	GO:0045487: gibberellin catabolic process	1.76E-03
59	GO:0006873: cellular ion homeostasis	1.76E-03
60	GO:0009749: response to glucose	1.82E-03
61	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.95E-03
62	GO:0047484: regulation of response to osmotic stress	2.17E-03
63	GO:1900425: negative regulation of defense response to bacterium	2.17E-03
64	GO:0019760: glucosinolate metabolic process	2.35E-03
65	GO:0009639: response to red or far red light	2.35E-03
66	GO:0010555: response to mannitol	2.60E-03
67	GO:2000037: regulation of stomatal complex patterning	2.60E-03
68	GO:0010310: regulation of hydrogen peroxide metabolic process	2.60E-03
69	GO:1901001: negative regulation of response to salt stress	2.60E-03
70	GO:0009751: response to salicylic acid	2.83E-03
71	GO:0009790: embryo development	2.83E-03
72	GO:1902074: response to salt	3.06E-03
73	GO:0006955: immune response	3.06E-03
74	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.06E-03
75	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.06E-03
76	GO:0006355: regulation of transcription, DNA-templated	3.49E-03
77	GO:0007623: circadian rhythm	3.50E-03
78	GO:0007155: cell adhesion	3.55E-03
79	GO:0009819: drought recovery	3.55E-03
80	GO:0019375: galactolipid biosynthetic process	3.55E-03
81	GO:0009873: ethylene-activated signaling pathway	4.27E-03
82	GO:0010468: regulation of gene expression	4.38E-03
83	GO:0009617: response to bacterium	4.38E-03
84	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	4.60E-03
85	GO:0016573: histone acetylation	5.15E-03
86	GO:0010018: far-red light signaling pathway	5.15E-03
87	GO:2000280: regulation of root development	5.15E-03
88	GO:0007346: regulation of mitotic cell cycle	5.15E-03
89	GO:0019538: protein metabolic process	5.74E-03
90	GO:0051707: response to other organism	5.94E-03
91	GO:0009908: flower development	5.94E-03
92	GO:0009651: response to salt stress	6.09E-03
93	GO:0030148: sphingolipid biosynthetic process	6.34E-03
94	GO:0006816: calcium ion transport	6.34E-03
95	GO:0009682: induced systemic resistance	6.34E-03
96	GO:0045037: protein import into chloroplast stroma	6.96E-03
97	GO:0042538: hyperosmotic salinity response	7.46E-03
98	GO:0050826: response to freezing	7.61E-03
99	GO:0018107: peptidyl-threonine phosphorylation	7.61E-03
100	GO:0048467: gynoecium development	8.28E-03
101	GO:0045893: positive regulation of transcription, DNA-templated	8.54E-03
102	GO:0010030: positive regulation of seed germination	8.97E-03
103	GO:0009833: plant-type primary cell wall biogenesis	9.68E-03
104	GO:0042753: positive regulation of circadian rhythm	9.68E-03
105	GO:0030150: protein import into mitochondrial matrix	1.04E-02
106	GO:0042545: cell wall modification	1.11E-02
107	GO:0009624: response to nematode	1.14E-02
108	GO:0048511: rhythmic process	1.19E-02
109	GO:0009269: response to desiccation	1.19E-02
110	GO:0031408: oxylipin biosynthetic process	1.19E-02
111	GO:0051321: meiotic cell cycle	1.19E-02
112	GO:0006366: transcription from RNA polymerase II promoter	1.19E-02
113	GO:0080092: regulation of pollen tube growth	1.27E-02
114	GO:0010017: red or far-red light signaling pathway	1.27E-02
115	GO:0006629: lipid metabolic process	1.32E-02
116	GO:0000398: mRNA splicing, via spliceosome	1.32E-02
117	GO:0001944: vasculature development	1.35E-02
118	GO:0050832: defense response to fungus	1.35E-02
119	GO:0009686: gibberellin biosynthetic process	1.35E-02
120	GO:0010584: pollen exine formation	1.43E-02
121	GO:0009753: response to jasmonic acid	1.44E-02
122	GO:0070417: cellular response to cold	1.52E-02
123	GO:0042631: cellular response to water deprivation	1.60E-02
124	GO:0042335: cuticle development	1.60E-02
125	GO:0010501: RNA secondary structure unwinding	1.60E-02
126	GO:0009960: endosperm development	1.69E-02
127	GO:0071472: cellular response to salt stress	1.69E-02
128	GO:0006814: sodium ion transport	1.78E-02
129	GO:0009646: response to absence of light	1.78E-02
130	GO:0008654: phospholipid biosynthetic process	1.87E-02
131	GO:0010183: pollen tube guidance	1.87E-02
132	GO:0006351: transcription, DNA-templated	1.88E-02
133	GO:0000302: response to reactive oxygen species	1.97E-02
134	GO:0045490: pectin catabolic process	1.98E-02
135	GO:0010150: leaf senescence	1.98E-02
136	GO:0006470: protein dephosphorylation	2.27E-02
137	GO:0010286: heat acclimation	2.35E-02
138	GO:0009911: positive regulation of flower development	2.55E-02
139	GO:0001666: response to hypoxia	2.55E-02
140	GO:0010027: thylakoid membrane organization	2.55E-02
141	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.66E-02
142	GO:0010029: regulation of seed germination	2.66E-02
143	GO:0009816: defense response to bacterium, incompatible interaction	2.66E-02
144	GO:0035556: intracellular signal transduction	2.90E-02
145	GO:0016049: cell growth	2.98E-02
146	GO:0009817: defense response to fungus, incompatible interaction	3.09E-02
147	GO:0048481: plant ovule development	3.09E-02
148	GO:0006468: protein phosphorylation	3.49E-02
149	GO:0009637: response to blue light	3.65E-02
150	GO:0055085: transmembrane transport	3.65E-02
151	GO:0045087: innate immune response	3.65E-02
152	GO:0016567: protein ubiquitination	3.87E-02
153	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.93E-02
154	GO:0010200: response to chitin	3.93E-02
155	GO:0006839: mitochondrial transport	4.01E-02
156	GO:0006631: fatty acid metabolic process	4.13E-02
157	GO:0006952: defense response	4.34E-02
158	GO:0009744: response to sucrose	4.37E-02
159	GO:0009640: photomorphogenesis	4.37E-02
160	GO:0045892: negative regulation of transcription, DNA-templated	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
2	GO:0017048: Rho GTPase binding	0.00E+00
3	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
5	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
6	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
7	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
8	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
9	GO:0003883: CTP synthase activity	1.60E-05
10	GO:0052894: norspermine:oxygen oxidoreductase activity	2.00E-04
11	GO:0030627: pre-mRNA 5'-splice site binding	2.00E-04
12	GO:0090422: thiamine pyrophosphate transporter activity	2.00E-04
13	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	2.00E-04
14	GO:0004348: glucosylceramidase activity	2.00E-04
15	GO:0017022: myosin binding	4.48E-04
16	GO:0004103: choline kinase activity	4.48E-04
17	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.48E-04
18	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.48E-04
19	GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.48E-04
20	GO:0004127: cytidylate kinase activity	4.48E-04
21	GO:0045140: inositol phosphoceramide synthase activity	4.48E-04
22	GO:0016629: 12-oxophytodienoate reductase activity	4.48E-04
23	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	7.29E-04
24	GO:0005457: GDP-fucose transmembrane transporter activity	7.29E-04
25	GO:0046592: polyamine oxidase activity	7.29E-04
26	GO:0004383: guanylate cyclase activity	7.29E-04
27	GO:0019201: nucleotide kinase activity	1.04E-03
28	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.04E-03
29	GO:0001653: peptide receptor activity	1.04E-03
30	GO:0009041: uridylate kinase activity	1.04E-03
31	GO:0005432: calcium:sodium antiporter activity	1.04E-03
32	GO:0004715: non-membrane spanning protein tyrosine kinase activity	1.04E-03
33	GO:0035250: UDP-galactosyltransferase activity	1.04E-03
34	GO:0005460: UDP-glucose transmembrane transporter activity	1.04E-03
35	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.38E-03
36	GO:0004659: prenyltransferase activity	1.38E-03
37	GO:0000062: fatty-acyl-CoA binding	1.38E-03
38	GO:0016301: kinase activity	1.57E-03
39	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.76E-03
40	GO:0010294: abscisic acid glucosyltransferase activity	1.76E-03
41	GO:0051011: microtubule minus-end binding	1.76E-03
42	GO:0005459: UDP-galactose transmembrane transporter activity	1.76E-03
43	GO:0004623: phospholipase A2 activity	1.76E-03
44	GO:0019137: thioglucosidase activity	2.17E-03
45	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.50E-03
46	GO:0004143: diacylglycerol kinase activity	3.06E-03
47	GO:0016621: cinnamoyl-CoA reductase activity	3.06E-03
48	GO:0004806: triglyceride lipase activity	3.29E-03
49	GO:0015288: porin activity	3.55E-03
50	GO:0015491: cation:cation antiporter activity	3.55E-03
51	GO:0008308: voltage-gated anion channel activity	4.06E-03
52	GO:0003951: NAD+ kinase activity	4.06E-03
53	GO:0043565: sequence-specific DNA binding	5.66E-03
54	GO:0004713: protein tyrosine kinase activity	5.74E-03
55	GO:0005262: calcium channel activity	7.61E-03
56	GO:0005388: calcium-transporting ATPase activity	7.61E-03
57	GO:0015266: protein channel activity	7.61E-03
58	GO:0008131: primary amine oxidase activity	8.28E-03
59	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.28E-03
60	GO:0045330: aspartyl esterase activity	8.87E-03
61	GO:0017025: TBP-class protein binding	8.97E-03
62	GO:0003712: transcription cofactor activity	8.97E-03
63	GO:0004857: enzyme inhibitor activity	1.04E-02
64	GO:0043130: ubiquitin binding	1.04E-02
65	GO:0030599: pectinesterase activity	1.08E-02
66	GO:0005515: protein binding	1.09E-02
67	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
68	GO:0005524: ATP binding	1.18E-02
69	GO:0004707: MAP kinase activity	1.19E-02
70	GO:0018024: histone-lysine N-methyltransferase activity	1.52E-02
71	GO:0004402: histone acetyltransferase activity	1.60E-02
72	GO:0010181: FMN binding	1.78E-02
73	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.85E-02
74	GO:0019901: protein kinase binding	1.87E-02
75	GO:0015297: antiporter activity	1.89E-02
76	GO:0044212: transcription regulatory region DNA binding	2.01E-02
77	GO:0008194: UDP-glycosyltransferase activity	2.22E-02
78	GO:0102483: scopolin beta-glucosidase activity	2.87E-02
79	GO:0004721: phosphoprotein phosphatase activity	2.87E-02
80	GO:0004004: ATP-dependent RNA helicase activity	2.87E-02
81	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.98E-02
82	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.09E-02
83	GO:0005096: GTPase activator activity	3.20E-02
84	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.22E-02
85	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.31E-02
86	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.77E-02
87	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.83E-02
88	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.89E-02
89	GO:0008422: beta-glucosidase activity	3.89E-02
90	GO:0043621: protein self-association	4.62E-02
91	GO:0035091: phosphatidylinositol binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0070382: exocytic vesicle	2.00E-04
3	GO:0030133: transport vesicle	4.48E-04
4	GO:0031357: integral component of chloroplast inner membrane	4.48E-04
5	GO:0070652: HAUS complex	7.29E-04
6	GO:0045177: apical part of cell	1.04E-03
7	GO:0009527: plastid outer membrane	1.38E-03
8	GO:0000243: commitment complex	2.17E-03
9	GO:0031305: integral component of mitochondrial inner membrane	3.55E-03
10	GO:0071004: U2-type prespliceosome	3.55E-03
11	GO:0046930: pore complex	4.06E-03
12	GO:0005685: U1 snRNP	4.60E-03
13	GO:0005876: spindle microtubule	5.15E-03
14	GO:0090406: pollen tube	5.94E-03
15	GO:0005938: cell cortex	7.61E-03
16	GO:0005758: mitochondrial intermembrane space	1.04E-02
17	GO:0005743: mitochondrial inner membrane	1.20E-02
18	GO:0005634: nucleus	1.29E-02
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.43E-02
20	GO:0005694: chromosome	2.06E-02
21	GO:0046658: anchored component of plasma membrane	2.62E-02
22	GO:0005737: cytoplasm	2.84E-02
23	GO:0009707: chloroplast outer membrane	3.09E-02
24	GO:0009941: chloroplast envelope	3.22E-02
25	GO:0031225: anchored component of membrane	4.69E-02
26	GO:0005802: trans-Golgi network	4.85E-02