co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G75820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
2	GO:0030155: regulation of cell adhesion	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0071474: cellular hyperosmotic response	0.00E+00
6	GO:0009773: photosynthetic electron transport in photosystem I	6.50E-06
7	GO:0010027: thylakoid membrane organization	7.34E-06
8	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.15E-06
9	GO:0043007: maintenance of rDNA	1.46E-04
10	GO:0090548: response to nitrate starvation	1.46E-04
11	GO:0031998: regulation of fatty acid beta-oxidation	1.46E-04
12	GO:0043953: protein transport by the Tat complex	1.46E-04
13	GO:1902025: nitrate import	1.46E-04
14	GO:0010480: microsporocyte differentiation	1.46E-04
15	GO:0065002: intracellular protein transmembrane transport	1.46E-04
16	GO:0043686: co-translational protein modification	1.46E-04
17	GO:0080093: regulation of photorespiration	1.46E-04
18	GO:0015979: photosynthesis	1.65E-04
19	GO:0051262: protein tetramerization	3.33E-04
20	GO:0018026: peptidyl-lysine monomethylation	3.33E-04
21	GO:0048281: inflorescence morphogenesis	5.47E-04
22	GO:0080055: low-affinity nitrate transport	5.47E-04
23	GO:0016050: vesicle organization	5.47E-04
24	GO:0061077: chaperone-mediated protein folding	6.43E-04
25	GO:0010239: chloroplast mRNA processing	7.83E-04
26	GO:0010148: transpiration	7.83E-04
27	GO:1901332: negative regulation of lateral root development	7.83E-04
28	GO:0015976: carbon utilization	1.04E-03
29	GO:0051322: anaphase	1.04E-03
30	GO:0006109: regulation of carbohydrate metabolic process	1.04E-03
31	GO:0015994: chlorophyll metabolic process	1.04E-03
32	GO:0022622: root system development	1.04E-03
33	GO:0006552: leucine catabolic process	1.04E-03
34	GO:0010021: amylopectin biosynthetic process	1.04E-03
35	GO:0006808: regulation of nitrogen utilization	1.04E-03
36	GO:0045454: cell redox homeostasis	1.08E-03
37	GO:0006097: glyoxylate cycle	1.31E-03
38	GO:0035434: copper ion transmembrane transport	1.31E-03
39	GO:0016120: carotene biosynthetic process	1.31E-03
40	GO:0031365: N-terminal protein amino acid modification	1.31E-03
41	GO:0006810: transport	1.41E-03
42	GO:0042549: photosystem II stabilization	1.61E-03
43	GO:0042793: transcription from plastid promoter	1.61E-03
44	GO:0042026: protein refolding	1.93E-03
45	GO:1901259: chloroplast rRNA processing	1.93E-03
46	GO:0006458: 'de novo' protein folding	1.93E-03
47	GO:0030488: tRNA methylation	1.93E-03
48	GO:0015995: chlorophyll biosynthetic process	2.13E-03
49	GO:0032880: regulation of protein localization	2.27E-03
50	GO:0048437: floral organ development	2.27E-03
51	GO:0070370: cellular heat acclimation	2.27E-03
52	GO:0022904: respiratory electron transport chain	2.27E-03
53	GO:0010103: stomatal complex morphogenesis	2.27E-03
54	GO:0005978: glycogen biosynthetic process	2.63E-03
55	GO:0009642: response to light intensity	2.63E-03
56	GO:0006353: DNA-templated transcription, termination	2.63E-03
57	GO:0009631: cold acclimation	2.72E-03
58	GO:0001558: regulation of cell growth	3.00E-03
59	GO:0009658: chloroplast organization	3.47E-03
60	GO:0005982: starch metabolic process	3.81E-03
61	GO:0010205: photoinhibition	3.81E-03
62	GO:0006779: porphyrin-containing compound biosynthetic process	3.81E-03
63	GO:0006782: protoporphyrinogen IX biosynthetic process	4.23E-03
64	GO:0048829: root cap development	4.23E-03
65	GO:0010015: root morphogenesis	4.67E-03
66	GO:0019684: photosynthesis, light reaction	4.67E-03
67	GO:0009089: lysine biosynthetic process via diaminopimelate	4.67E-03
68	GO:0009073: aromatic amino acid family biosynthetic process	4.67E-03
69	GO:0043085: positive regulation of catalytic activity	4.67E-03
70	GO:0048229: gametophyte development	4.67E-03
71	GO:0071365: cellular response to auxin stimulus	5.13E-03
72	GO:0010075: regulation of meristem growth	5.60E-03
73	GO:0006094: gluconeogenesis	5.60E-03
74	GO:2000012: regulation of auxin polar transport	5.60E-03
75	GO:0010628: positive regulation of gene expression	5.60E-03
76	GO:0006108: malate metabolic process	5.60E-03
77	GO:0006096: glycolytic process	6.08E-03
78	GO:0009934: regulation of meristem structural organization	6.09E-03
79	GO:0006302: double-strand break repair	6.09E-03
80	GO:0010030: positive regulation of seed germination	6.59E-03
81	GO:0009944: polarity specification of adaxial/abaxial axis	7.63E-03
82	GO:0006825: copper ion transport	8.18E-03
83	GO:0051302: regulation of cell division	8.18E-03
84	GO:0007017: microtubule-based process	8.18E-03
85	GO:0019915: lipid storage	8.73E-03
86	GO:0051321: meiotic cell cycle	8.73E-03
87	GO:0030245: cellulose catabolic process	9.30E-03
88	GO:0009686: gibberellin biosynthetic process	9.89E-03
89	GO:0071369: cellular response to ethylene stimulus	9.89E-03
90	GO:0001944: vasculature development	9.89E-03
91	GO:0016117: carotenoid biosynthetic process	1.11E-02
92	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.11E-02
93	GO:0008284: positive regulation of cell proliferation	1.11E-02
94	GO:0048653: anther development	1.17E-02
95	GO:0042631: cellular response to water deprivation	1.17E-02
96	GO:0010051: xylem and phloem pattern formation	1.17E-02
97	GO:0009958: positive gravitropism	1.24E-02
98	GO:0006662: glycerol ether metabolic process	1.24E-02
99	GO:0009646: response to absence of light	1.30E-02
100	GO:0019252: starch biosynthetic process	1.37E-02
101	GO:0009735: response to cytokinin	1.38E-02
102	GO:0071554: cell wall organization or biogenesis	1.43E-02
103	GO:0048235: pollen sperm cell differentiation	1.50E-02
104	GO:1901657: glycosyl compound metabolic process	1.57E-02
105	GO:0009409: response to cold	1.62E-02
106	GO:0009567: double fertilization forming a zygote and endosperm	1.64E-02
107	GO:0000910: cytokinesis	1.79E-02
108	GO:0009607: response to biotic stimulus	1.94E-02
109	GO:0009627: systemic acquired resistance	2.01E-02
110	GO:0009834: plant-type secondary cell wall biogenesis	2.41E-02
111	GO:0048527: lateral root development	2.49E-02
112	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.53E-02
113	GO:0006099: tricarboxylic acid cycle	2.75E-02
114	GO:0034599: cellular response to oxidative stress	2.75E-02
115	GO:0006869: lipid transport	3.20E-02
116	GO:0009965: leaf morphogenesis	3.47E-02
117	GO:0042742: defense response to bacterium	3.75E-02
118	GO:0009664: plant-type cell wall organization	3.75E-02
119	GO:0006364: rRNA processing	3.94E-02
120	GO:0006857: oligopeptide transport	4.14E-02
121	GO:0030154: cell differentiation	4.16E-02
122	GO:0043086: negative regulation of catalytic activity	4.44E-02
123	GO:0009740: gibberellic acid mediated signaling pathway	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0016166: phytoene dehydrogenase activity	0.00E+00
3	GO:0017046: peptide hormone binding	0.00E+00
4	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
5	GO:0048039: ubiquinone binding	0.00E+00
6	GO:0009899: ent-kaurene synthase activity	0.00E+00
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.71E-05
8	GO:0042277: peptide binding	1.71E-05
9	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.46E-04
10	GO:0005227: calcium activated cation channel activity	1.46E-04
11	GO:0042586: peptide deformylase activity	1.46E-04
12	GO:0016868: intramolecular transferase activity, phosphotransferases	3.33E-04
13	GO:0009977: proton motive force dependent protein transmembrane transporter activity	3.33E-04
14	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.33E-04
15	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	3.33E-04
16	GO:0047746: chlorophyllase activity	3.33E-04
17	GO:0005528: FK506 binding	5.33E-04
18	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.47E-04
19	GO:0043169: cation binding	5.47E-04
20	GO:0017150: tRNA dihydrouridine synthase activity	5.47E-04
21	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	7.83E-04
22	GO:0016851: magnesium chelatase activity	7.83E-04
23	GO:0080032: methyl jasmonate esterase activity	1.04E-03
24	GO:0019199: transmembrane receptor protein kinase activity	1.04E-03
25	GO:0016279: protein-lysine N-methyltransferase activity	1.04E-03
26	GO:0048038: quinone binding	1.27E-03
27	GO:0080030: methyl indole-3-acetate esterase activity	1.61E-03
28	GO:0004332: fructose-bisphosphate aldolase activity	1.61E-03
29	GO:0016615: malate dehydrogenase activity	1.61E-03
30	GO:0051920: peroxiredoxin activity	1.93E-03
31	GO:0030060: L-malate dehydrogenase activity	1.93E-03
32	GO:0005261: cation channel activity	1.93E-03
33	GO:0016209: antioxidant activity	2.63E-03
34	GO:0004033: aldo-keto reductase (NADP) activity	2.63E-03
35	GO:0030145: manganese ion binding	2.72E-03
36	GO:0005375: copper ion transmembrane transporter activity	3.00E-03
37	GO:0008173: RNA methyltransferase activity	3.00E-03
38	GO:0000287: magnesium ion binding	3.39E-03
39	GO:0008047: enzyme activator activity	4.23E-03
40	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.46E-03
41	GO:0044183: protein binding involved in protein folding	4.67E-03
42	GO:0004521: endoribonuclease activity	5.13E-03
43	GO:0004089: carbonate dehydratase activity	5.60E-03
44	GO:0008083: growth factor activity	6.09E-03
45	GO:0015035: protein disulfide oxidoreductase activity	7.54E-03
46	GO:0004857: enzyme inhibitor activity	7.63E-03
47	GO:0009055: electron carrier activity	8.18E-03
48	GO:0008408: 3'-5' exonuclease activity	8.73E-03
49	GO:0033612: receptor serine/threonine kinase binding	8.73E-03
50	GO:0008810: cellulase activity	9.89E-03
51	GO:0047134: protein-disulfide reductase activity	1.11E-02
52	GO:0004791: thioredoxin-disulfide reductase activity	1.30E-02
53	GO:0008017: microtubule binding	1.33E-02
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.57E-02
55	GO:0008483: transaminase activity	1.72E-02
56	GO:0005200: structural constituent of cytoskeleton	1.72E-02
57	GO:0016413: O-acetyltransferase activity	1.79E-02
58	GO:0102483: scopolin beta-glucosidase activity	2.09E-02
59	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.20E-02
60	GO:0008422: beta-glucosidase activity	2.83E-02
61	GO:0051539: 4 iron, 4 sulfur cluster binding	2.92E-02
62	GO:0051537: 2 iron, 2 sulfur cluster binding	3.37E-02
63	GO:0003924: GTPase activity	3.60E-02
64	GO:0008289: lipid binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
3	GO:0043235: receptor complex	0.00E+00
4	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
5	GO:0009507: chloroplast	9.54E-18
6	GO:0009535: chloroplast thylakoid membrane	8.98E-12
7	GO:0009570: chloroplast stroma	2.88E-11
8	GO:0009534: chloroplast thylakoid	8.74E-11
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.17E-08
10	GO:0009941: chloroplast envelope	1.29E-07
11	GO:0030095: chloroplast photosystem II	1.29E-05
12	GO:0031361: integral component of thylakoid membrane	1.46E-04
13	GO:0000791: euchromatin	1.46E-04
14	GO:0009543: chloroplast thylakoid lumen	1.76E-04
15	GO:0000427: plastid-encoded plastid RNA polymerase complex	3.33E-04
16	GO:0030870: Mre11 complex	3.33E-04
17	GO:0009508: plastid chromosome	3.41E-04
18	GO:0010007: magnesium chelatase complex	5.47E-04
19	GO:0009509: chromoplast	5.47E-04
20	GO:0033281: TAT protein transport complex	5.47E-04
21	GO:0009654: photosystem II oxygen evolving complex	5.87E-04
22	GO:0005874: microtubule	7.82E-04
23	GO:0009579: thylakoid	1.05E-03
24	GO:0019898: extrinsic component of membrane	1.19E-03
25	GO:0000795: synaptonemal complex	1.31E-03
26	GO:0009295: nucleoid	1.62E-03
27	GO:0009533: chloroplast stromal thylakoid	2.27E-03
28	GO:0009501: amyloplast	2.63E-03
29	GO:0009538: photosystem I reaction center	2.63E-03
30	GO:0031305: integral component of mitochondrial inner membrane	2.63E-03
31	GO:0045298: tubulin complex	3.40E-03
32	GO:0055028: cortical microtubule	4.23E-03
33	GO:0005740: mitochondrial envelope	4.23E-03
34	GO:0009574: preprophase band	5.60E-03
35	GO:0009706: chloroplast inner membrane	7.32E-03
36	GO:0042651: thylakoid membrane	8.18E-03
37	GO:0010287: plastoglobule	8.69E-03
38	GO:0015935: small ribosomal subunit	8.73E-03
39	GO:0009523: photosystem II	1.37E-02
40	GO:0000785: chromatin	1.50E-02
41	GO:0010319: stromule	1.72E-02
42	GO:0048046: apoplast	2.48E-02
43	GO:0031977: thylakoid lumen	3.01E-02
44	GO:0005834: heterotrimeric G-protein complex	4.65E-02
45	GO:0009536: plastid	4.81E-02