GO Enrichment Analysis of Co-expressed Genes with
AT1G75680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0000023: maltose metabolic process | 0.00E+00 |
| 3 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 4 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 5 | GO:0009735: response to cytokinin | 2.91E-10 |
| 6 | GO:0010025: wax biosynthetic process | 7.99E-08 |
| 7 | GO:0009409: response to cold | 7.27E-07 |
| 8 | GO:0005983: starch catabolic process | 2.91E-06 |
| 9 | GO:0015979: photosynthesis | 3.12E-06 |
| 10 | GO:0042335: cuticle development | 2.34E-05 |
| 11 | GO:0019252: starch biosynthetic process | 3.34E-05 |
| 12 | GO:0005978: glycogen biosynthetic process | 5.09E-05 |
| 13 | GO:0032544: plastid translation | 6.46E-05 |
| 14 | GO:0010206: photosystem II repair | 8.01E-05 |
| 15 | GO:0005980: glycogen catabolic process | 9.33E-05 |
| 16 | GO:0043489: RNA stabilization | 9.33E-05 |
| 17 | GO:0044262: cellular carbohydrate metabolic process | 9.33E-05 |
| 18 | GO:0000025: maltose catabolic process | 9.33E-05 |
| 19 | GO:0042761: very long-chain fatty acid biosynthetic process | 9.72E-05 |
| 20 | GO:0000038: very long-chain fatty acid metabolic process | 1.37E-04 |
| 21 | GO:0043255: regulation of carbohydrate biosynthetic process | 2.20E-04 |
| 22 | GO:0009629: response to gravity | 2.20E-04 |
| 23 | GO:0005976: polysaccharide metabolic process | 2.20E-04 |
| 24 | GO:0007154: cell communication | 2.20E-04 |
| 25 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.20E-04 |
| 26 | GO:0006000: fructose metabolic process | 3.67E-04 |
| 27 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.28E-04 |
| 28 | GO:0010731: protein glutathionylation | 5.28E-04 |
| 29 | GO:0006424: glutamyl-tRNA aminoacylation | 5.28E-04 |
| 30 | GO:1902358: sulfate transmembrane transport | 5.28E-04 |
| 31 | GO:2000122: negative regulation of stomatal complex development | 7.02E-04 |
| 32 | GO:0010021: amylopectin biosynthetic process | 7.02E-04 |
| 33 | GO:0010037: response to carbon dioxide | 7.02E-04 |
| 34 | GO:0015976: carbon utilization | 7.02E-04 |
| 35 | GO:0051322: anaphase | 7.02E-04 |
| 36 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.02E-04 |
| 37 | GO:0009765: photosynthesis, light harvesting | 7.02E-04 |
| 38 | GO:0045727: positive regulation of translation | 7.02E-04 |
| 39 | GO:0010600: regulation of auxin biosynthetic process | 7.02E-04 |
| 40 | GO:0006544: glycine metabolic process | 8.88E-04 |
| 41 | GO:0032543: mitochondrial translation | 8.88E-04 |
| 42 | GO:0006461: protein complex assembly | 8.88E-04 |
| 43 | GO:0009435: NAD biosynthetic process | 8.88E-04 |
| 44 | GO:0009913: epidermal cell differentiation | 1.08E-03 |
| 45 | GO:0010337: regulation of salicylic acid metabolic process | 1.08E-03 |
| 46 | GO:0006563: L-serine metabolic process | 1.08E-03 |
| 47 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.08E-03 |
| 48 | GO:0000470: maturation of LSU-rRNA | 1.08E-03 |
| 49 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.29E-03 |
| 50 | GO:1901259: chloroplast rRNA processing | 1.29E-03 |
| 51 | GO:0009955: adaxial/abaxial pattern specification | 1.29E-03 |
| 52 | GO:0030244: cellulose biosynthetic process | 1.30E-03 |
| 53 | GO:0009817: defense response to fungus, incompatible interaction | 1.30E-03 |
| 54 | GO:0009416: response to light stimulus | 1.39E-03 |
| 55 | GO:0009631: cold acclimation | 1.50E-03 |
| 56 | GO:0008272: sulfate transport | 1.51E-03 |
| 57 | GO:0050829: defense response to Gram-negative bacterium | 1.51E-03 |
| 58 | GO:0009645: response to low light intensity stimulus | 1.51E-03 |
| 59 | GO:0010161: red light signaling pathway | 1.51E-03 |
| 60 | GO:0006412: translation | 1.53E-03 |
| 61 | GO:0042254: ribosome biogenesis | 1.64E-03 |
| 62 | GO:0042255: ribosome assembly | 1.75E-03 |
| 63 | GO:0006353: DNA-templated transcription, termination | 1.75E-03 |
| 64 | GO:0009704: de-etiolation | 1.75E-03 |
| 65 | GO:0048564: photosystem I assembly | 1.75E-03 |
| 66 | GO:0010928: regulation of auxin mediated signaling pathway | 1.75E-03 |
| 67 | GO:0008610: lipid biosynthetic process | 1.75E-03 |
| 68 | GO:0046686: response to cadmium ion | 1.95E-03 |
| 69 | GO:0009657: plastid organization | 2.00E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 2.00E-03 |
| 71 | GO:0010114: response to red light | 2.10E-03 |
| 72 | GO:0010205: photoinhibition | 2.52E-03 |
| 73 | GO:0035999: tetrahydrofolate interconversion | 2.52E-03 |
| 74 | GO:0006032: chitin catabolic process | 2.80E-03 |
| 75 | GO:0006949: syncytium formation | 2.80E-03 |
| 76 | GO:0072593: reactive oxygen species metabolic process | 3.09E-03 |
| 77 | GO:0009750: response to fructose | 3.09E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.09E-03 |
| 79 | GO:0009773: photosynthetic electron transport in photosystem I | 3.09E-03 |
| 80 | GO:0010102: lateral root morphogenesis | 3.69E-03 |
| 81 | GO:0006807: nitrogen compound metabolic process | 3.69E-03 |
| 82 | GO:0006094: gluconeogenesis | 3.69E-03 |
| 83 | GO:0005986: sucrose biosynthetic process | 3.69E-03 |
| 84 | GO:0009624: response to nematode | 3.99E-03 |
| 85 | GO:0019253: reductive pentose-phosphate cycle | 4.01E-03 |
| 86 | GO:0010167: response to nitrate | 4.33E-03 |
| 87 | GO:0010053: root epidermal cell differentiation | 4.33E-03 |
| 88 | GO:0009825: multidimensional cell growth | 4.33E-03 |
| 89 | GO:0009833: plant-type primary cell wall biogenesis | 4.67E-03 |
| 90 | GO:0000027: ribosomal large subunit assembly | 5.01E-03 |
| 91 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.36E-03 |
| 92 | GO:0016998: cell wall macromolecule catabolic process | 5.72E-03 |
| 93 | GO:0035428: hexose transmembrane transport | 6.09E-03 |
| 94 | GO:0010017: red or far-red light signaling pathway | 6.09E-03 |
| 95 | GO:0006633: fatty acid biosynthetic process | 6.26E-03 |
| 96 | GO:0006508: proteolysis | 6.41E-03 |
| 97 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.47E-03 |
| 98 | GO:0007623: circadian rhythm | 6.88E-03 |
| 99 | GO:0042631: cellular response to water deprivation | 7.65E-03 |
| 100 | GO:0046323: glucose import | 8.06E-03 |
| 101 | GO:0015986: ATP synthesis coupled proton transport | 8.47E-03 |
| 102 | GO:0071554: cell wall organization or biogenesis | 9.33E-03 |
| 103 | GO:0000302: response to reactive oxygen species | 9.33E-03 |
| 104 | GO:0032502: developmental process | 9.78E-03 |
| 105 | GO:0030163: protein catabolic process | 1.02E-02 |
| 106 | GO:0009826: unidimensional cell growth | 1.03E-02 |
| 107 | GO:0009828: plant-type cell wall loosening | 1.07E-02 |
| 108 | GO:0000910: cytokinesis | 1.16E-02 |
| 109 | GO:0010027: thylakoid membrane organization | 1.21E-02 |
| 110 | GO:0009737: response to abscisic acid | 1.27E-02 |
| 111 | GO:0048573: photoperiodism, flowering | 1.36E-02 |
| 112 | GO:0016311: dephosphorylation | 1.41E-02 |
| 113 | GO:0018298: protein-chromophore linkage | 1.46E-02 |
| 114 | GO:0009832: plant-type cell wall biogenesis | 1.51E-02 |
| 115 | GO:0010218: response to far red light | 1.56E-02 |
| 116 | GO:0010119: regulation of stomatal movement | 1.62E-02 |
| 117 | GO:0045087: innate immune response | 1.73E-02 |
| 118 | GO:0009637: response to blue light | 1.73E-02 |
| 119 | GO:0009853: photorespiration | 1.73E-02 |
| 120 | GO:0042742: defense response to bacterium | 1.75E-02 |
| 121 | GO:0071555: cell wall organization | 1.75E-02 |
| 122 | GO:0034599: cellular response to oxidative stress | 1.78E-02 |
| 123 | GO:0009640: photomorphogenesis | 2.07E-02 |
| 124 | GO:0009644: response to high light intensity | 2.18E-02 |
| 125 | GO:0006855: drug transmembrane transport | 2.31E-02 |
| 126 | GO:0009664: plant-type cell wall organization | 2.43E-02 |
| 127 | GO:0009809: lignin biosynthetic process | 2.55E-02 |
| 128 | GO:0006364: rRNA processing | 2.55E-02 |
| 129 | GO:0009585: red, far-red light phototransduction | 2.55E-02 |
| 130 | GO:0006096: glycolytic process | 2.88E-02 |
| 131 | GO:0005975: carbohydrate metabolic process | 2.95E-02 |
| 132 | GO:0009626: plant-type hypersensitive response | 3.01E-02 |
| 133 | GO:0042545: cell wall modification | 3.21E-02 |
| 134 | GO:0006396: RNA processing | 3.35E-02 |
| 135 | GO:0042744: hydrogen peroxide catabolic process | 4.22E-02 |
| 136 | GO:0045490: pectin catabolic process | 4.84E-02 |
| 137 | GO:0009451: RNA modification | 4.92E-02 |
| 138 | GO:0009793: embryo development ending in seed dormancy | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 6.67E-11 |
| 3 | GO:0008266: poly(U) RNA binding | 4.63E-08 |
| 4 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 7.97E-06 |
| 5 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 9.33E-05 |
| 6 | GO:0004134: 4-alpha-glucanotransferase activity | 9.33E-05 |
| 7 | GO:0004645: phosphorylase activity | 9.33E-05 |
| 8 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 9.33E-05 |
| 9 | GO:0008184: glycogen phosphorylase activity | 9.33E-05 |
| 10 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 9.33E-05 |
| 11 | GO:0003735: structural constituent of ribosome | 1.71E-04 |
| 12 | GO:0008967: phosphoglycolate phosphatase activity | 2.20E-04 |
| 13 | GO:0004618: phosphoglycerate kinase activity | 2.20E-04 |
| 14 | GO:0010297: heteropolysaccharide binding | 2.20E-04 |
| 15 | GO:0033201: alpha-1,4-glucan synthase activity | 2.20E-04 |
| 16 | GO:0004750: ribulose-phosphate 3-epimerase activity | 2.20E-04 |
| 17 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.20E-04 |
| 18 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 2.63E-04 |
| 19 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 2.63E-04 |
| 20 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 2.63E-04 |
| 21 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 3.67E-04 |
| 22 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.67E-04 |
| 23 | GO:0004373: glycogen (starch) synthase activity | 3.67E-04 |
| 24 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 7.02E-04 |
| 25 | GO:0009011: starch synthase activity | 7.02E-04 |
| 26 | GO:0004372: glycine hydroxymethyltransferase activity | 8.88E-04 |
| 27 | GO:0003959: NADPH dehydrogenase activity | 8.88E-04 |
| 28 | GO:0008237: metallopeptidase activity | 9.05E-04 |
| 29 | GO:0004130: cytochrome-c peroxidase activity | 1.08E-03 |
| 30 | GO:2001070: starch binding | 1.08E-03 |
| 31 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.25E-03 |
| 32 | GO:0004602: glutathione peroxidase activity | 1.29E-03 |
| 33 | GO:0004222: metalloendopeptidase activity | 1.43E-03 |
| 34 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.00E-03 |
| 35 | GO:0008271: secondary active sulfate transmembrane transporter activity | 2.00E-03 |
| 36 | GO:0004568: chitinase activity | 2.80E-03 |
| 37 | GO:0015116: sulfate transmembrane transporter activity | 3.38E-03 |
| 38 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.43E-03 |
| 39 | GO:0004089: carbonate dehydratase activity | 3.69E-03 |
| 40 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.01E-03 |
| 41 | GO:0031409: pigment binding | 4.67E-03 |
| 42 | GO:0005528: FK506 binding | 5.01E-03 |
| 43 | GO:0030170: pyridoxal phosphate binding | 5.53E-03 |
| 44 | GO:0004252: serine-type endopeptidase activity | 5.53E-03 |
| 45 | GO:0004176: ATP-dependent peptidase activity | 5.72E-03 |
| 46 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.47E-03 |
| 47 | GO:0003727: single-stranded RNA binding | 6.85E-03 |
| 48 | GO:0001085: RNA polymerase II transcription factor binding | 8.06E-03 |
| 49 | GO:0005355: glucose transmembrane transporter activity | 8.47E-03 |
| 50 | GO:0050662: coenzyme binding | 8.47E-03 |
| 51 | GO:0016740: transferase activity | 9.18E-03 |
| 52 | GO:0048038: quinone binding | 9.33E-03 |
| 53 | GO:0016759: cellulose synthase activity | 1.07E-02 |
| 54 | GO:0016413: O-acetyltransferase activity | 1.16E-02 |
| 55 | GO:0016168: chlorophyll binding | 1.26E-02 |
| 56 | GO:0030247: polysaccharide binding | 1.36E-02 |
| 57 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.41E-02 |
| 58 | GO:0008236: serine-type peptidase activity | 1.41E-02 |
| 59 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.62E-02 |
| 60 | GO:0003993: acid phosphatase activity | 1.78E-02 |
| 61 | GO:0004364: glutathione transferase activity | 2.01E-02 |
| 62 | GO:0015293: symporter activity | 2.24E-02 |
| 63 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.31E-02 |
| 64 | GO:0016757: transferase activity, transferring glycosyl groups | 2.55E-02 |
| 65 | GO:0003690: double-stranded DNA binding | 2.62E-02 |
| 66 | GO:0045330: aspartyl esterase activity | 2.75E-02 |
| 67 | GO:0003729: mRNA binding | 2.87E-02 |
| 68 | GO:0030599: pectinesterase activity | 3.15E-02 |
| 69 | GO:0016746: transferase activity, transferring acyl groups | 3.35E-02 |
| 70 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.22E-02 |
| 71 | GO:0015144: carbohydrate transmembrane transporter activity | 4.38E-02 |
| 72 | GO:0046910: pectinesterase inhibitor activity | 4.61E-02 |
| 73 | GO:0005351: sugar:proton symporter activity | 4.76E-02 |
| 74 | GO:0008017: microtubule binding | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030931: heterotetrameric ADPG pyrophosphorylase complex | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009941: chloroplast envelope | 2.06E-25 |
| 4 | GO:0009579: thylakoid | 1.79E-21 |
| 5 | GO:0009534: chloroplast thylakoid | 1.95E-21 |
| 6 | GO:0009570: chloroplast stroma | 5.71E-21 |
| 7 | GO:0009507: chloroplast | 8.90E-21 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 3.62E-19 |
| 9 | GO:0010319: stromule | 1.52E-06 |
| 10 | GO:0010287: plastoglobule | 2.63E-06 |
| 11 | GO:0009508: plastid chromosome | 3.68E-06 |
| 12 | GO:0031977: thylakoid lumen | 8.63E-06 |
| 13 | GO:0005840: ribosome | 2.94E-05 |
| 14 | GO:0048046: apoplast | 3.37E-05 |
| 15 | GO:0009295: nucleoid | 5.54E-05 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 5.88E-05 |
| 17 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 9.33E-05 |
| 18 | GO:0016020: membrane | 1.07E-04 |
| 19 | GO:0030093: chloroplast photosystem I | 2.20E-04 |
| 20 | GO:0009523: photosystem II | 6.66E-04 |
| 21 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.08E-03 |
| 22 | GO:0009505: plant-type cell wall | 1.33E-03 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 1.51E-03 |
| 24 | GO:0009501: amyloplast | 1.75E-03 |
| 25 | GO:0009538: photosystem I reaction center | 1.75E-03 |
| 26 | GO:0042644: chloroplast nucleoid | 2.25E-03 |
| 27 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 2.25E-03 |
| 29 | GO:0009574: preprophase band | 3.69E-03 |
| 30 | GO:0009706: chloroplast inner membrane | 3.99E-03 |
| 31 | GO:0030095: chloroplast photosystem II | 4.01E-03 |
| 32 | GO:0030076: light-harvesting complex | 4.33E-03 |
| 33 | GO:0015935: small ribosomal subunit | 5.72E-03 |
| 34 | GO:0009522: photosystem I | 8.47E-03 |
| 35 | GO:0005618: cell wall | 9.99E-03 |
| 36 | GO:0071944: cell periphery | 1.02E-02 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 1.21E-02 |
| 38 | GO:0005667: transcription factor complex | 1.31E-02 |
| 39 | GO:0031969: chloroplast membrane | 1.32E-02 |
| 40 | GO:0022625: cytosolic large ribosomal subunit | 1.39E-02 |
| 41 | GO:0015934: large ribosomal subunit | 1.62E-02 |
| 42 | GO:0016021: integral component of membrane | 2.41E-02 |
| 43 | GO:0005789: endoplasmic reticulum membrane | 2.97E-02 |
| 44 | GO:0022626: cytosolic ribosome | 3.32E-02 |
| 45 | GO:0009524: phragmoplast | 4.00E-02 |
| 46 | GO:0005759: mitochondrial matrix | 4.53E-02 |