GO Enrichment Analysis of Co-expressed Genes with
AT1G75200
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0071731: response to nitric oxide | 0.00E+00 |
2 | GO:1990258: histone glutamine methylation | 0.00E+00 |
3 | GO:0051050: positive regulation of transport | 0.00E+00 |
4 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
5 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
6 | GO:0006412: translation | 1.33E-19 |
7 | GO:0006413: translational initiation | 6.30E-08 |
8 | GO:0046686: response to cadmium ion | 2.14E-07 |
9 | GO:0006626: protein targeting to mitochondrion | 8.51E-07 |
10 | GO:0006457: protein folding | 1.46E-06 |
11 | GO:0034976: response to endoplasmic reticulum stress | 1.92E-06 |
12 | GO:0009735: response to cytokinin | 3.05E-06 |
13 | GO:0048569: post-embryonic animal organ development | 3.07E-06 |
14 | GO:0042254: ribosome biogenesis | 6.64E-06 |
15 | GO:0006364: rRNA processing | 2.41E-05 |
16 | GO:0031167: rRNA methylation | 7.21E-05 |
17 | GO:0030150: protein import into mitochondrial matrix | 7.91E-05 |
18 | GO:0001731: formation of translation preinitiation complex | 1.05E-04 |
19 | GO:0007005: mitochondrion organization | 1.22E-04 |
20 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.57E-04 |
21 | GO:0019877: diaminopimelate biosynthetic process | 2.57E-04 |
22 | GO:0006407: rRNA export from nucleus | 2.57E-04 |
23 | GO:0002143: tRNA wobble position uridine thiolation | 2.57E-04 |
24 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 2.57E-04 |
25 | GO:0048453: sepal formation | 2.57E-04 |
26 | GO:0035266: meristem growth | 2.57E-04 |
27 | GO:0031060: regulation of histone methylation | 2.57E-04 |
28 | GO:0006434: seryl-tRNA aminoacylation | 2.57E-04 |
29 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.57E-04 |
30 | GO:0001510: RNA methylation | 2.98E-04 |
31 | GO:0006189: 'de novo' IMP biosynthetic process | 3.60E-04 |
32 | GO:0009553: embryo sac development | 4.33E-04 |
33 | GO:0006414: translational elongation | 4.99E-04 |
34 | GO:0009967: positive regulation of signal transduction | 5.68E-04 |
35 | GO:0006435: threonyl-tRNA aminoacylation | 5.68E-04 |
36 | GO:0015786: UDP-glucose transport | 5.68E-04 |
37 | GO:0045859: regulation of protein kinase activity | 5.68E-04 |
38 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 5.68E-04 |
39 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 5.68E-04 |
40 | GO:0010043: response to zinc ion | 7.97E-04 |
41 | GO:0006446: regulation of translational initiation | 8.40E-04 |
42 | GO:0070475: rRNA base methylation | 9.22E-04 |
43 | GO:0055074: calcium ion homeostasis | 9.22E-04 |
44 | GO:0015783: GDP-fucose transport | 9.22E-04 |
45 | GO:0010476: gibberellin mediated signaling pathway | 9.22E-04 |
46 | GO:0042256: mature ribosome assembly | 9.22E-04 |
47 | GO:0010338: leaf formation | 9.22E-04 |
48 | GO:0045039: protein import into mitochondrial inner membrane | 9.22E-04 |
49 | GO:0000027: ribosomal large subunit assembly | 1.15E-03 |
50 | GO:0072334: UDP-galactose transmembrane transport | 1.32E-03 |
51 | GO:0006164: purine nucleotide biosynthetic process | 1.32E-03 |
52 | GO:0009855: determination of bilateral symmetry | 1.32E-03 |
53 | GO:0032981: mitochondrial respiratory chain complex I assembly | 1.32E-03 |
54 | GO:0046513: ceramide biosynthetic process | 1.32E-03 |
55 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.32E-03 |
56 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 1.32E-03 |
57 | GO:0042273: ribosomal large subunit biogenesis | 1.76E-03 |
58 | GO:0051205: protein insertion into membrane | 1.76E-03 |
59 | GO:0010483: pollen tube reception | 1.76E-03 |
60 | GO:0008033: tRNA processing | 2.10E-03 |
61 | GO:0018279: protein N-linked glycosylation via asparagine | 2.25E-03 |
62 | GO:0031365: N-terminal protein amino acid modification | 2.25E-03 |
63 | GO:0006461: protein complex assembly | 2.25E-03 |
64 | GO:0010305: leaf vascular tissue pattern formation | 2.26E-03 |
65 | GO:0010358: leaf shaping | 2.77E-03 |
66 | GO:0016554: cytidine to uridine editing | 2.77E-03 |
67 | GO:0042176: regulation of protein catabolic process | 2.77E-03 |
68 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 2.77E-03 |
69 | GO:0000470: maturation of LSU-rRNA | 2.77E-03 |
70 | GO:0030163: protein catabolic process | 3.18E-03 |
71 | GO:0006458: 'de novo' protein folding | 3.33E-03 |
72 | GO:0000245: spliceosomal complex assembly | 3.33E-03 |
73 | GO:0016444: somatic cell DNA recombination | 3.33E-03 |
74 | GO:0009955: adaxial/abaxial pattern specification | 3.33E-03 |
75 | GO:0000398: mRNA splicing, via spliceosome | 3.34E-03 |
76 | GO:0045454: cell redox homeostasis | 3.69E-03 |
77 | GO:0080186: developmental vegetative growth | 3.93E-03 |
78 | GO:0000338: protein deneddylation | 3.93E-03 |
79 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.93E-03 |
80 | GO:0006605: protein targeting | 4.56E-03 |
81 | GO:0000028: ribosomal small subunit assembly | 4.56E-03 |
82 | GO:0009651: response to salt stress | 5.05E-03 |
83 | GO:0001558: regulation of cell growth | 5.22E-03 |
84 | GO:0006367: transcription initiation from RNA polymerase II promoter | 5.22E-03 |
85 | GO:0043562: cellular response to nitrogen levels | 5.22E-03 |
86 | GO:0010208: pollen wall assembly | 5.22E-03 |
87 | GO:0006002: fructose 6-phosphate metabolic process | 5.22E-03 |
88 | GO:0010311: lateral root formation | 5.52E-03 |
89 | GO:0048507: meristem development | 5.92E-03 |
90 | GO:0009793: embryo development ending in seed dormancy | 6.09E-03 |
91 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.64E-03 |
92 | GO:0010449: root meristem growth | 6.64E-03 |
93 | GO:0010205: photoinhibition | 6.64E-03 |
94 | GO:0043067: regulation of programmed cell death | 6.64E-03 |
95 | GO:0010162: seed dormancy process | 7.40E-03 |
96 | GO:0006298: mismatch repair | 7.40E-03 |
97 | GO:0006259: DNA metabolic process | 7.40E-03 |
98 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.19E-03 |
99 | GO:0016485: protein processing | 8.19E-03 |
100 | GO:0008283: cell proliferation | 8.59E-03 |
101 | GO:0006820: anion transport | 9.00E-03 |
102 | GO:0006312: mitotic recombination | 9.00E-03 |
103 | GO:2000012: regulation of auxin polar transport | 9.85E-03 |
104 | GO:0010102: lateral root morphogenesis | 9.85E-03 |
105 | GO:0048440: carpel development | 1.07E-02 |
106 | GO:0009933: meristem structural organization | 1.07E-02 |
107 | GO:0090351: seedling development | 1.16E-02 |
108 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.35E-02 |
109 | GO:0006487: protein N-linked glycosylation | 1.35E-02 |
110 | GO:0048316: seed development | 1.42E-02 |
111 | GO:0010073: meristem maintenance | 1.45E-02 |
112 | GO:0051302: regulation of cell division | 1.45E-02 |
113 | GO:0006334: nucleosome assembly | 1.55E-02 |
114 | GO:0061077: chaperone-mediated protein folding | 1.55E-02 |
115 | GO:0071215: cellular response to abscisic acid stimulus | 1.76E-02 |
116 | GO:0010082: regulation of root meristem growth | 1.76E-02 |
117 | GO:0009294: DNA mediated transformation | 1.76E-02 |
118 | GO:0048443: stamen development | 1.86E-02 |
119 | GO:0000413: protein peptidyl-prolyl isomerization | 2.09E-02 |
120 | GO:0009960: endosperm development | 2.20E-02 |
121 | GO:0010154: fruit development | 2.20E-02 |
122 | GO:0010197: polar nucleus fusion | 2.20E-02 |
123 | GO:0048868: pollen tube development | 2.20E-02 |
124 | GO:0009845: seed germination | 2.25E-02 |
125 | GO:0009790: embryo development | 2.42E-02 |
126 | GO:0010183: pollen tube guidance | 2.43E-02 |
127 | GO:0009749: response to glucose | 2.43E-02 |
128 | GO:0080156: mitochondrial mRNA modification | 2.56E-02 |
129 | GO:0006635: fatty acid beta-oxidation | 2.56E-02 |
130 | GO:0009567: double fertilization forming a zygote and endosperm | 2.93E-02 |
131 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.00E-02 |
132 | GO:0016579: protein deubiquitination | 3.19E-02 |
133 | GO:0042128: nitrate assimilation | 3.59E-02 |
134 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.73E-02 |
135 | GO:0016049: cell growth | 3.87E-02 |
136 | GO:0009555: pollen development | 4.28E-02 |
137 | GO:0006811: ion transport | 4.30E-02 |
138 | GO:0048527: lateral root development | 4.45E-02 |
139 | GO:0009631: cold acclimation | 4.45E-02 |
140 | GO:0000724: double-strand break repair via homologous recombination | 4.60E-02 |
141 | GO:0015031: protein transport | 4.87E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
2 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
3 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
4 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
5 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
6 | GO:0003735: structural constituent of ribosome | 2.58E-25 |
7 | GO:0003746: translation elongation factor activity | 4.46E-12 |
8 | GO:0003729: mRNA binding | 2.08E-09 |
9 | GO:0003743: translation initiation factor activity | 8.35E-09 |
10 | GO:0000166: nucleotide binding | 4.52E-07 |
11 | GO:0030515: snoRNA binding | 3.56E-06 |
12 | GO:0003756: protein disulfide isomerase activity | 6.86E-06 |
13 | GO:0008649: rRNA methyltransferase activity | 1.11E-05 |
14 | GO:0003723: RNA binding | 1.21E-05 |
15 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.33E-05 |
16 | GO:0031369: translation initiation factor binding | 1.05E-04 |
17 | GO:0008235: metalloexopeptidase activity | 1.90E-04 |
18 | GO:0004828: serine-tRNA ligase activity | 2.57E-04 |
19 | GO:0004679: AMP-activated protein kinase activity | 2.57E-04 |
20 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 2.57E-04 |
21 | GO:0015157: oligosaccharide transmembrane transporter activity | 2.57E-04 |
22 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 2.57E-04 |
23 | GO:0030942: endoplasmic reticulum signal peptide binding | 2.57E-04 |
24 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 2.57E-04 |
25 | GO:0035614: snRNA stem-loop binding | 2.57E-04 |
26 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 2.57E-04 |
27 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 2.57E-04 |
28 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 2.57E-04 |
29 | GO:0008135: translation factor activity, RNA binding | 2.98E-04 |
30 | GO:0051082: unfolded protein binding | 4.54E-04 |
31 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 5.68E-04 |
32 | GO:0005078: MAP-kinase scaffold activity | 5.68E-04 |
33 | GO:0004829: threonine-tRNA ligase activity | 5.68E-04 |
34 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 5.68E-04 |
35 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 5.68E-04 |
36 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 5.68E-04 |
37 | GO:0030619: U1 snRNA binding | 5.68E-04 |
38 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 5.68E-04 |
39 | GO:0050291: sphingosine N-acyltransferase activity | 5.68E-04 |
40 | GO:0044183: protein binding involved in protein folding | 5.76E-04 |
41 | GO:0019843: rRNA binding | 6.42E-04 |
42 | GO:0032947: protein complex scaffold | 9.22E-04 |
43 | GO:0019003: GDP binding | 9.22E-04 |
44 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 9.22E-04 |
45 | GO:0005457: GDP-fucose transmembrane transporter activity | 9.22E-04 |
46 | GO:0008469: histone-arginine N-methyltransferase activity | 9.22E-04 |
47 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 9.22E-04 |
48 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 9.22E-04 |
49 | GO:0004792: thiosulfate sulfurtransferase activity | 1.32E-03 |
50 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.32E-03 |
51 | GO:0008097: 5S rRNA binding | 1.32E-03 |
52 | GO:0005525: GTP binding | 2.21E-03 |
53 | GO:0008641: small protein activating enzyme activity | 2.25E-03 |
54 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.25E-03 |
55 | GO:0004040: amidase activity | 2.25E-03 |
56 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.25E-03 |
57 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.77E-03 |
58 | GO:0030983: mismatched DNA binding | 2.77E-03 |
59 | GO:0019887: protein kinase regulator activity | 3.33E-03 |
60 | GO:0003872: 6-phosphofructokinase activity | 3.93E-03 |
61 | GO:0030674: protein binding, bridging | 4.56E-03 |
62 | GO:0015288: porin activity | 4.56E-03 |
63 | GO:0008312: 7S RNA binding | 4.56E-03 |
64 | GO:0003924: GTPase activity | 5.07E-03 |
65 | GO:0008308: voltage-gated anion channel activity | 5.22E-03 |
66 | GO:0008173: RNA methyltransferase activity | 5.22E-03 |
67 | GO:0003678: DNA helicase activity | 5.92E-03 |
68 | GO:0050897: cobalt ion binding | 6.07E-03 |
69 | GO:0001055: RNA polymerase II activity | 6.64E-03 |
70 | GO:0030234: enzyme regulator activity | 7.40E-03 |
71 | GO:0042393: histone binding | 7.59E-03 |
72 | GO:0001054: RNA polymerase I activity | 8.19E-03 |
73 | GO:0004177: aminopeptidase activity | 8.19E-03 |
74 | GO:0001056: RNA polymerase III activity | 9.00E-03 |
75 | GO:0005524: ATP binding | 9.11E-03 |
76 | GO:0015266: protein channel activity | 9.85E-03 |
77 | GO:0009982: pseudouridine synthase activity | 9.85E-03 |
78 | GO:0005515: protein binding | 1.01E-02 |
79 | GO:0003714: transcription corepressor activity | 1.35E-02 |
80 | GO:0004407: histone deacetylase activity | 1.35E-02 |
81 | GO:0051087: chaperone binding | 1.45E-02 |
82 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.55E-02 |
83 | GO:0004298: threonine-type endopeptidase activity | 1.55E-02 |
84 | GO:0004176: ATP-dependent peptidase activity | 1.55E-02 |
85 | GO:0008514: organic anion transmembrane transporter activity | 1.86E-02 |
86 | GO:0016853: isomerase activity | 2.32E-02 |
87 | GO:0005509: calcium ion binding | 3.07E-02 |
88 | GO:0004004: ATP-dependent RNA helicase activity | 3.73E-02 |
89 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.87E-02 |
90 | GO:0008236: serine-type peptidase activity | 3.87E-02 |
91 | GO:0008168: methyltransferase activity | 4.26E-02 |
92 | GO:0003682: chromatin binding | 4.67E-02 |
93 | GO:0003697: single-stranded DNA binding | 4.75E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
2 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
3 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
4 | GO:0005829: cytosol | 1.86E-26 |
5 | GO:0022626: cytosolic ribosome | 3.26E-22 |
6 | GO:0005730: nucleolus | 8.84E-19 |
7 | GO:0005840: ribosome | 2.52E-17 |
8 | GO:0022625: cytosolic large ribosomal subunit | 4.61E-17 |
9 | GO:0022627: cytosolic small ribosomal subunit | 7.39E-10 |
10 | GO:0005737: cytoplasm | 1.33E-09 |
11 | GO:0005774: vacuolar membrane | 1.38E-09 |
12 | GO:0015934: large ribosomal subunit | 5.31E-09 |
13 | GO:0009506: plasmodesma | 9.04E-09 |
14 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.47E-07 |
15 | GO:0032040: small-subunit processome | 6.24E-07 |
16 | GO:0031428: box C/D snoRNP complex | 1.26E-06 |
17 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.42E-06 |
18 | GO:0005618: cell wall | 2.82E-05 |
19 | GO:0005788: endoplasmic reticulum lumen | 4.22E-05 |
20 | GO:0005773: vacuole | 1.01E-04 |
21 | GO:0016282: eukaryotic 43S preinitiation complex | 1.05E-04 |
22 | GO:0016020: membrane | 1.44E-04 |
23 | GO:0033290: eukaryotic 48S preinitiation complex | 1.45E-04 |
24 | GO:0032389: MutLalpha complex | 2.57E-04 |
25 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 2.57E-04 |
26 | GO:0005712: chiasma | 2.57E-04 |
27 | GO:0030686: 90S preribosome | 2.57E-04 |
28 | GO:0005783: endoplasmic reticulum | 2.94E-04 |
29 | GO:0005681: spliceosomal complex | 3.38E-04 |
30 | GO:0005834: heterotrimeric G-protein complex | 3.74E-04 |
31 | GO:0015030: Cajal body | 4.27E-04 |
32 | GO:0008541: proteasome regulatory particle, lid subcomplex | 5.76E-04 |
33 | GO:0005853: eukaryotic translation elongation factor 1 complex | 9.22E-04 |
34 | GO:0005743: mitochondrial inner membrane | 1.04E-03 |
35 | GO:0005758: mitochondrial intermembrane space | 1.15E-03 |
36 | GO:0015935: small ribosomal subunit | 1.39E-03 |
37 | GO:0000502: proteasome complex | 1.78E-03 |
38 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.80E-03 |
39 | GO:0000813: ESCRT I complex | 2.25E-03 |
40 | GO:0008250: oligosaccharyltransferase complex | 2.25E-03 |
41 | GO:0000795: synaptonemal complex | 2.25E-03 |
42 | GO:0005747: mitochondrial respiratory chain complex I | 2.29E-03 |
43 | GO:0005851: eukaryotic translation initiation factor 2B complex | 2.77E-03 |
44 | GO:0030127: COPII vesicle coat | 2.77E-03 |
45 | GO:0009507: chloroplast | 3.89E-03 |
46 | GO:0031359: integral component of chloroplast outer membrane | 3.93E-03 |
47 | GO:0005759: mitochondrial matrix | 4.95E-03 |
48 | GO:0005739: mitochondrion | 5.04E-03 |
49 | GO:0005742: mitochondrial outer membrane translocase complex | 5.22E-03 |
50 | GO:0000326: protein storage vacuole | 5.22E-03 |
51 | GO:0046930: pore complex | 5.22E-03 |
52 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.22E-03 |
53 | GO:0005886: plasma membrane | 5.35E-03 |
54 | GO:0005685: U1 snRNP | 5.92E-03 |
55 | GO:0008180: COP9 signalosome | 5.92E-03 |
56 | GO:0005736: DNA-directed RNA polymerase I complex | 5.92E-03 |
57 | GO:0005666: DNA-directed RNA polymerase III complex | 6.64E-03 |
58 | GO:0000418: DNA-directed RNA polymerase IV complex | 7.40E-03 |
59 | GO:0048471: perinuclear region of cytoplasm | 8.19E-03 |
60 | GO:0005665: DNA-directed RNA polymerase II, core complex | 9.00E-03 |
61 | GO:0019013: viral nucleocapsid | 9.85E-03 |
62 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.16E-02 |
63 | GO:0005741: mitochondrial outer membrane | 1.55E-02 |
64 | GO:0005839: proteasome core complex | 1.55E-02 |
65 | GO:0009505: plant-type cell wall | 1.63E-02 |
66 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.81E-02 |
67 | GO:0000790: nuclear chromatin | 1.97E-02 |
68 | GO:0016592: mediator complex | 2.68E-02 |
69 | GO:0005622: intracellular | 2.85E-02 |
70 | GO:0030529: intracellular ribonucleoprotein complex | 3.32E-02 |