co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:0016117: carotenoid biosynthetic process	8.83E-08
4	GO:0043609: regulation of carbon utilization	8.12E-06
5	GO:0034337: RNA folding	8.12E-06
6	GO:0019285: glycine betaine biosynthetic process from choline	8.12E-06
7	GO:0090342: regulation of cell aging	2.19E-05
8	GO:0016560: protein import into peroxisome matrix, docking	2.19E-05
9	GO:0006000: fructose metabolic process	3.99E-05
10	GO:0006515: misfolded or incompletely synthesized protein catabolic process	6.14E-05
11	GO:0010021: amylopectin biosynthetic process	8.58E-05
12	GO:0010109: regulation of photosynthesis	8.58E-05
13	GO:0051205: protein insertion into membrane	8.58E-05
14	GO:0045038: protein import into chloroplast thylakoid membrane	1.12E-04
15	GO:0016123: xanthophyll biosynthetic process	1.12E-04
16	GO:0016120: carotene biosynthetic process	1.12E-04
17	GO:1901259: chloroplast rRNA processing	1.71E-04
18	GO:0010196: nonphotochemical quenching	2.04E-04
19	GO:0006605: protein targeting	2.37E-04
20	GO:0005978: glycogen biosynthetic process	2.37E-04
21	GO:0006002: fructose 6-phosphate metabolic process	2.71E-04
22	GO:0005982: starch metabolic process	3.43E-04
23	GO:0048829: root cap development	3.81E-04
24	GO:0016485: protein processing	4.19E-04
25	GO:0010628: positive regulation of gene expression	4.98E-04
26	GO:0040007: growth	8.44E-04
27	GO:0009646: response to absence of light	1.08E-03
28	GO:0019252: starch biosynthetic process	1.13E-03
29	GO:0010090: trichome morphogenesis	1.29E-03
30	GO:0055114: oxidation-reduction process	1.32E-03
31	GO:0010027: thylakoid membrane organization	1.50E-03
32	GO:0009834: plant-type secondary cell wall biogenesis	1.91E-03
33	GO:0006499: N-terminal protein myristoylation	1.91E-03
34	GO:0048527: lateral root development	1.97E-03
35	GO:0006096: glycolytic process	3.40E-03
36	GO:0009658: chloroplast organization	7.59E-03
37	GO:0045454: cell redox homeostasis	1.00E-02
38	GO:0006886: intracellular protein transport	1.02E-02
39	GO:0008152: metabolic process	1.24E-02
40	GO:0045893: positive regulation of transcription, DNA-templated	1.92E-02
41	GO:0055085: transmembrane transport	2.06E-02
42	GO:0009414: response to water deprivation	2.83E-02
43	GO:0007275: multicellular organism development	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0016166: phytoene dehydrogenase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.54E-06
5	GO:0008802: betaine-aldehyde dehydrogenase activity	8.12E-06
6	GO:0010291: carotene beta-ring hydroxylase activity	2.19E-05
7	GO:0003844: 1,4-alpha-glucan branching enzyme activity	2.19E-05
8	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.99E-05
9	GO:0043169: cation binding	3.99E-05
10	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	6.14E-05
11	GO:2001070: starch binding	1.41E-04
12	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.43E-04
13	GO:0004190: aspartic-type endopeptidase activity	5.80E-04
14	GO:0004176: ATP-dependent peptidase activity	7.53E-04
15	GO:0008236: serine-type peptidase activity	1.73E-03
16	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.79E-03
17	GO:0003746: translation elongation factor activity	2.10E-03
18	GO:0019825: oxygen binding	2.29E-03
19	GO:0005506: iron ion binding	3.18E-03
20	GO:0016491: oxidoreductase activity	4.25E-03
21	GO:0019843: rRNA binding	4.50E-03
22	GO:0004252: serine-type endopeptidase activity	4.83E-03
23	GO:0020037: heme binding	5.08E-03
24	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.62E-03
25	GO:0008233: peptidase activity	8.71E-03
26	GO:0004497: monooxygenase activity	8.82E-03
27	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.12E-02
28	GO:0005525: GTP binding	2.48E-02
29	GO:0005524: ATP binding	2.75E-02
30	GO:0005215: transporter activity	3.10E-02
31	GO:0003729: mRNA binding	3.83E-02
32	GO:0016787: hydrolase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0009516: leucoplast	0.00E+00
2	GO:0043233: organelle lumen	0.00E+00
3	GO:0009507: chloroplast	8.21E-07
4	GO:0009941: chloroplast envelope	1.96E-06
5	GO:0009570: chloroplast stroma	5.19E-06
6	GO:0005782: peroxisomal matrix	3.99E-05
7	GO:0009509: chromoplast	3.99E-05
8	GO:0030660: Golgi-associated vesicle membrane	8.58E-05
9	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	8.58E-05
10	GO:0009534: chloroplast thylakoid	1.73E-04
11	GO:0009501: amyloplast	2.37E-04
12	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.37E-04
13	GO:0005765: lysosomal membrane	4.19E-04
14	GO:0032040: small-subunit processome	4.58E-04
15	GO:0031969: chloroplast membrane	6.48E-04
16	GO:0042651: thylakoid membrane	7.09E-04
17	GO:0010008: endosome membrane	3.48E-03
18	GO:0005886: plasma membrane	7.03E-03
19	GO:0009535: chloroplast thylakoid membrane	7.20E-03
20	GO:0022626: cytosolic ribosome	1.69E-02
21	GO:0005777: peroxisome	1.92E-02
22	GO:0005768: endosome	2.67E-02
23	GO:0005840: ribosome	2.98E-02
24	GO:0005730: nucleolus	4.19E-02