co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74440

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032928: regulation of superoxide anion generation	0.00E+00
2	GO:0009236: cobalamin biosynthetic process	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0007530: sex determination	0.00E+00
5	GO:0046294: formaldehyde catabolic process	0.00E+00
6	GO:0015746: citrate transport	0.00E+00
7	GO:0019354: siroheme biosynthetic process	9.69E-05
8	GO:0009853: photorespiration	1.50E-04
9	GO:0006432: phenylalanyl-tRNA aminoacylation	2.28E-04
10	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	2.28E-04
11	GO:0008154: actin polymerization or depolymerization	2.28E-04
12	GO:0016122: xanthophyll metabolic process	2.28E-04
13	GO:0015940: pantothenate biosynthetic process	3.80E-04
14	GO:0071492: cellular response to UV-A	3.80E-04
15	GO:0045793: positive regulation of cell size	3.80E-04
16	GO:2000082: regulation of L-ascorbic acid biosynthetic process	3.80E-04
17	GO:0032786: positive regulation of DNA-templated transcription, elongation	3.80E-04
18	GO:0008333: endosome to lysosome transport	3.80E-04
19	GO:0032877: positive regulation of DNA endoreduplication	5.46E-04
20	GO:0006107: oxaloacetate metabolic process	5.46E-04
21	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.46E-04
22	GO:0042989: sequestering of actin monomers	5.46E-04
23	GO:0044205: 'de novo' UMP biosynthetic process	7.26E-04
24	GO:0051781: positive regulation of cell division	7.26E-04
25	GO:0071486: cellular response to high light intensity	7.26E-04
26	GO:0009765: photosynthesis, light harvesting	7.26E-04
27	GO:0006221: pyrimidine nucleotide biosynthetic process	7.26E-04
28	GO:0010117: photoprotection	9.17E-04
29	GO:0006796: phosphate-containing compound metabolic process	1.12E-03
30	GO:0006888: ER to Golgi vesicle-mediated transport	1.24E-03
31	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.34E-03
32	GO:0010044: response to aluminum ion	1.57E-03
33	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.57E-03
34	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.57E-03
35	GO:0034599: cellular response to oxidative stress	1.80E-03
36	GO:0006099: tricarboxylic acid cycle	1.80E-03
37	GO:0000028: ribosomal small subunit assembly	1.81E-03
38	GO:0048589: developmental growth	2.33E-03
39	GO:0046685: response to arsenic-containing substance	2.33E-03
40	GO:0009245: lipid A biosynthetic process	2.33E-03
41	GO:1900865: chloroplast RNA modification	2.61E-03
42	GO:0009688: abscisic acid biosynthetic process	2.90E-03
43	GO:0043069: negative regulation of programmed cell death	2.90E-03
44	GO:0006325: chromatin organization	2.90E-03
45	GO:0016925: protein sumoylation	3.50E-03
46	GO:0010628: positive regulation of gene expression	3.82E-03
47	GO:0006108: malate metabolic process	3.82E-03
48	GO:0010229: inflorescence development	3.82E-03
49	GO:0006094: gluconeogenesis	3.82E-03
50	GO:0006807: nitrogen compound metabolic process	3.82E-03
51	GO:0016569: covalent chromatin modification	3.96E-03
52	GO:0006979: response to oxidative stress	4.43E-03
53	GO:0010039: response to iron ion	4.49E-03
54	GO:0006071: glycerol metabolic process	4.83E-03
55	GO:0006487: protein N-linked glycosylation	5.19E-03
56	GO:0007010: cytoskeleton organization	5.19E-03
57	GO:0015992: proton transport	5.93E-03
58	GO:0010431: seed maturation	5.93E-03
59	GO:0019915: lipid storage	5.93E-03
60	GO:0042147: retrograde transport, endosome to Golgi	7.51E-03
61	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-03
62	GO:0015991: ATP hydrolysis coupled proton transport	7.93E-03
63	GO:0042631: cellular response to water deprivation	7.93E-03
64	GO:0006662: glycerol ether metabolic process	8.35E-03
65	GO:0015986: ATP synthesis coupled proton transport	8.79E-03
66	GO:0010183: pollen tube guidance	9.23E-03
67	GO:0010090: trichome morphogenesis	1.06E-02
68	GO:0009826: unidimensional cell growth	1.08E-02
69	GO:0042254: ribosome biogenesis	1.14E-02
70	GO:0010286: heat acclimation	1.16E-02
71	GO:0000910: cytokinesis	1.20E-02
72	GO:0055114: oxidation-reduction process	1.40E-02
73	GO:0045454: cell redox homeostasis	1.67E-02
74	GO:0048527: lateral root development	1.68E-02
75	GO:0006886: intracellular protein transport	1.72E-02
76	GO:0006281: DNA repair	2.06E-02
77	GO:0042542: response to hydrogen peroxide	2.08E-02
78	GO:0009926: auxin polar transport	2.14E-02
79	GO:0009965: leaf morphogenesis	2.33E-02
80	GO:0006855: drug transmembrane transport	2.39E-02
81	GO:0010224: response to UV-B	2.72E-02
82	GO:0006096: glycolytic process	2.99E-02
83	GO:0046686: response to cadmium ion	3.24E-02
84	GO:0000398: mRNA splicing, via spliceosome	3.77E-02
85	GO:0006633: fatty acid biosynthetic process	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
2	GO:0050152: omega-amidase activity	0.00E+00
3	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
4	GO:0004151: dihydroorotase activity	0.00E+00
5	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
6	GO:0030611: arsenate reductase activity	9.69E-05
7	GO:0015137: citrate transmembrane transporter activity	9.69E-05
8	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	9.69E-05
9	GO:0008794: arsenate reductase (glutaredoxin) activity	1.44E-04
10	GO:0004826: phenylalanine-tRNA ligase activity	2.28E-04
11	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.80E-04
12	GO:0005047: signal recognition particle binding	3.80E-04
13	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	5.46E-04
14	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	6.09E-04
15	GO:0004576: oligosaccharyl transferase activity	7.26E-04
16	GO:0010011: auxin binding	7.26E-04
17	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	7.26E-04
18	GO:0000993: RNA polymerase II core binding	7.26E-04
19	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	7.26E-04
20	GO:0031386: protein tag	9.17E-04
21	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	9.17E-04
22	GO:0003785: actin monomer binding	9.17E-04
23	GO:0031177: phosphopantetheine binding	1.12E-03
24	GO:0000035: acyl binding	1.34E-03
25	GO:0004602: glutathione peroxidase activity	1.34E-03
26	GO:0042162: telomeric DNA binding	1.57E-03
27	GO:0004427: inorganic diphosphatase activity	1.57E-03
28	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.57E-03
29	GO:0050897: cobalt ion binding	1.57E-03
30	GO:0035064: methylated histone binding	1.81E-03
31	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.81E-03
32	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.33E-03
33	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.33E-03
34	GO:0001055: RNA polymerase II activity	2.61E-03
35	GO:0000049: tRNA binding	3.50E-03
36	GO:0004089: carbonate dehydratase activity	3.82E-03
37	GO:0015035: protein disulfide oxidoreductase activity	4.33E-03
38	GO:0004725: protein tyrosine phosphatase activity	4.83E-03
39	GO:0051536: iron-sulfur cluster binding	5.19E-03
40	GO:0003727: single-stranded RNA binding	7.10E-03
41	GO:0047134: protein-disulfide reductase activity	7.51E-03
42	GO:0004791: thioredoxin-disulfide reductase activity	8.79E-03
43	GO:0004872: receptor activity	9.23E-03
44	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.06E-02
45	GO:0003735: structural constituent of ribosome	1.24E-02
46	GO:0016168: chlorophyll binding	1.30E-02
47	GO:0015238: drug transmembrane transporter activity	1.57E-02
48	GO:0003697: single-stranded DNA binding	1.79E-02
49	GO:0003746: translation elongation factor activity	1.79E-02
50	GO:0050661: NADP binding	1.96E-02
51	GO:0051539: 4 iron, 4 sulfur cluster binding	1.96E-02
52	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.39E-02
53	GO:0051287: NAD binding	2.46E-02
54	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.65E-02
55	GO:0003779: actin binding	3.33E-02
56	GO:0004386: helicase activity	3.62E-02
57	GO:0019843: rRNA binding	4.00E-02
58	GO:0008565: protein transporter activity	4.54E-02
59	GO:0015297: antiporter activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005747: mitochondrial respiratory chain complex I	1.28E-06
3	GO:0005750: mitochondrial respiratory chain complex III	5.01E-06
4	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.15E-06
5	GO:0045271: respiratory chain complex I	1.06E-05
6	GO:0045273: respiratory chain complex II	5.40E-05
7	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	5.40E-05
8	GO:0032044: DSIF complex	9.69E-05
9	GO:0005739: mitochondrion	1.48E-04
10	GO:0035145: exon-exon junction complex	2.28E-04
11	GO:0005697: telomerase holoenzyme complex	2.28E-04
12	GO:0031966: mitochondrial membrane	2.91E-04
13	GO:0016471: vacuolar proton-transporting V-type ATPase complex	7.26E-04
14	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	7.26E-04
15	GO:0009517: PSII associated light-harvesting complex II	7.26E-04
16	GO:0008250: oligosaccharyltransferase complex	9.17E-04
17	GO:0016591: DNA-directed RNA polymerase II, holoenzyme	9.17E-04
18	GO:0005771: multivesicular body	1.12E-03
19	GO:0032588: trans-Golgi network membrane	1.12E-03
20	GO:0030904: retromer complex	1.12E-03
21	GO:0005763: mitochondrial small ribosomal subunit	2.33E-03
22	GO:0005730: nucleolus	2.48E-03
23	GO:0000418: DNA-directed RNA polymerase IV complex	2.90E-03
24	GO:0005665: DNA-directed RNA polymerase II, core complex	3.50E-03
25	GO:0009508: plastid chromosome	3.82E-03
26	GO:0005938: cell cortex	3.82E-03
27	GO:0005840: ribosome	4.70E-03
28	GO:0000419: DNA-directed RNA polymerase V complex	4.83E-03
29	GO:0070469: respiratory chain	5.55E-03
30	GO:0005759: mitochondrial matrix	6.59E-03
31	GO:0015629: actin cytoskeleton	6.70E-03
32	GO:0009507: chloroplast	7.10E-03
33	GO:0005774: vacuolar membrane	8.65E-03
34	GO:0009523: photosystem II	9.23E-03
35	GO:0005794: Golgi apparatus	9.63E-03
36	GO:0005783: endoplasmic reticulum	9.92E-03
37	GO:0009295: nucleoid	1.16E-02
38	GO:0005788: endoplasmic reticulum lumen	1.30E-02
39	GO:0005829: cytosol	1.52E-02
40	GO:0000325: plant-type vacuole	1.68E-02
41	GO:0005773: vacuole	1.81E-02
42	GO:0031902: late endosome membrane	2.02E-02
43	GO:0009536: plastid	2.41E-02
44	GO:0016607: nuclear speck	3.05E-02
45	GO:0005732: small nucleolar ribonucleoprotein complex	3.62E-02
46	GO:0005654: nucleoplasm	3.92E-02
47	GO:0005777: peroxisome	4.19E-02
48	GO:0005737: cytoplasm	4.97E-02