Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G74410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009236: cobalamin biosynthetic process0.00E+00
2GO:0018293: protein-FAD linkage0.00E+00
3GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
4GO:0006120: mitochondrial electron transport, NADH to ubiquinone3.40E-08
5GO:0009853: photorespiration3.67E-05
6GO:0019354: siroheme biosynthetic process4.74E-05
7GO:0009240: isopentenyl diphosphate biosynthetic process4.74E-05
8GO:0031468: nuclear envelope reassembly4.74E-05
9GO:0050992: dimethylallyl diphosphate biosynthetic process1.17E-04
10GO:0015940: pantothenate biosynthetic process2.00E-04
11GO:0006760: folic acid-containing compound metabolic process2.00E-04
12GO:0015991: ATP hydrolysis coupled proton transport2.22E-04
13GO:1901332: negative regulation of lateral root development2.94E-04
14GO:0006970: response to osmotic stress5.82E-04
15GO:0006121: mitochondrial electron transport, succinate to ubiquinone6.13E-04
16GO:0006555: methionine metabolic process6.13E-04
17GO:0019509: L-methionine salvage from methylthioadenosine7.31E-04
18GO:1901001: negative regulation of response to salt stress7.31E-04
19GO:0006099: tricarboxylic acid cycle7.32E-04
20GO:0000028: ribosomal small subunit assembly9.81E-04
21GO:0006506: GPI anchor biosynthetic process9.81E-04
22GO:0015996: chlorophyll catabolic process1.11E-03
23GO:0006754: ATP biosynthetic process1.25E-03
24GO:0000103: sulfate assimilation1.55E-03
25GO:0052544: defense response by callose deposition in cell wall1.70E-03
26GO:0006006: glucose metabolic process2.03E-03
27GO:0006829: zinc II ion transport2.03E-03
28GO:0009691: cytokinin biosynthetic process2.03E-03
29GO:0019853: L-ascorbic acid biosynthetic process2.38E-03
30GO:0007030: Golgi organization2.38E-03
31GO:0035556: intracellular signal transduction2.46E-03
32GO:2000377: regulation of reactive oxygen species metabolic process2.74E-03
33GO:0008299: isoprenoid biosynthetic process2.93E-03
34GO:0015992: proton transport3.12E-03
35GO:0010431: seed maturation3.12E-03
36GO:0016226: iron-sulfur cluster assembly3.32E-03
37GO:0055114: oxidation-reduction process3.40E-03
38GO:0080022: primary root development4.15E-03
39GO:0006520: cellular amino acid metabolic process4.37E-03
40GO:0006662: glycerol ether metabolic process4.37E-03
41GO:0015986: ATP synthesis coupled proton transport4.59E-03
42GO:0061025: membrane fusion4.59E-03
43GO:0010090: trichome morphogenesis5.52E-03
44GO:0016192: vesicle-mediated transport5.70E-03
45GO:0009651: response to salt stress6.46E-03
46GO:0006886: intracellular protein transport6.69E-03
47GO:0015995: chlorophyll biosynthetic process7.28E-03
48GO:0010311: lateral root formation8.09E-03
49GO:0006499: N-terminal protein myristoylation8.37E-03
50GO:0048527: lateral root development8.65E-03
51GO:0034599: cellular response to oxidative stress9.51E-03
52GO:0030001: metal ion transport1.01E-02
53GO:0009965: leaf morphogenesis1.20E-02
54GO:0009908: flower development1.28E-02
55GO:0042538: hyperosmotic salinity response1.29E-02
56GO:0010224: response to UV-B1.39E-02
57GO:0016569: covalent chromatin modification1.67E-02
58GO:0018105: peptidyl-serine phosphorylation1.78E-02
59GO:0009058: biosynthetic process2.13E-02
60GO:0010150: leaf senescence2.57E-02
61GO:0010228: vegetative to reproductive phase transition of meristem2.66E-02
62GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.79E-02
63GO:0006979: response to oxidative stress2.91E-02
64GO:0009826: unidimensional cell growth3.42E-02
65GO:0080167: response to karrikin4.09E-02
66GO:0046777: protein autophosphorylation4.30E-02
67GO:0015979: photosynthesis4.50E-02
68GO:0045454: cell redox homeostasis4.65E-02
69GO:0045892: negative regulation of transcription, DNA-templated4.71E-02
70GO:0006869: lipid transport4.97E-02
RankGO TermAdjusted P value
1GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
2GO:0016852: sirohydrochlorin cobaltochelatase activity0.00E+00
3GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
4GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
5GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
6GO:0051266: sirohydrochlorin ferrochelatase activity0.00E+00
7GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
8GO:0008137: NADH dehydrogenase (ubiquinone) activity1.14E-07
9GO:0004452: isopentenyl-diphosphate delta-isomerase activity4.74E-05
10GO:0019707: protein-cysteine S-acyltransferase activity4.74E-05
11GO:0080048: GDP-D-glucose phosphorylase activity4.74E-05
12GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity4.74E-05
13GO:0102293: pheophytinase b activity4.74E-05
14GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity4.74E-05
15GO:0080047: GDP-L-galactose phosphorylase activity4.74E-05
16GO:0051536: iron-sulfur cluster binding1.14E-04
17GO:0047746: chlorophyllase activity1.17E-04
18GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity2.00E-04
19GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.40E-04
20GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor3.94E-04
21GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances3.94E-04
22GO:0008177: succinate dehydrogenase (ubiquinone) activity5.00E-04
23GO:0005496: steroid binding5.00E-04
24GO:0051117: ATPase binding6.13E-04
25GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity6.13E-04
26GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity6.13E-04
27GO:0080046: quercetin 4'-O-glucosyltransferase activity6.13E-04
28GO:0070300: phosphatidic acid binding7.31E-04
29GO:0051539: 4 iron, 4 sulfur cluster binding7.95E-04
30GO:0008320: protein transmembrane transporter activity8.54E-04
31GO:0005085: guanyl-nucleotide exchange factor activity8.54E-04
32GO:0015078: hydrogen ion transmembrane transporter activity1.11E-03
33GO:0004129: cytochrome-c oxidase activity1.70E-03
34GO:0004089: carbonate dehydratase activity2.03E-03
35GO:0043130: ubiquitin binding2.74E-03
36GO:0016787: hydrolase activity3.27E-03
37GO:0047134: protein-disulfide reductase activity3.93E-03
38GO:0046873: metal ion transmembrane transporter activity4.37E-03
39GO:0004791: thioredoxin-disulfide reductase activity4.59E-03
40GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.52E-03
41GO:0016597: amino acid binding6.25E-03
42GO:0042803: protein homodimerization activity6.79E-03
43GO:0009931: calcium-dependent protein serine/threonine kinase activity7.01E-03
44GO:0004683: calmodulin-dependent protein kinase activity7.28E-03
45GO:0050897: cobalt ion binding8.65E-03
46GO:0051537: 2 iron, 2 sulfur cluster binding1.16E-02
47GO:0005198: structural molecule activity1.20E-02
48GO:0016887: ATPase activity1.24E-02
49GO:0015035: protein disulfide oxidoreductase activity1.78E-02
50GO:0005507: copper ion binding2.03E-02
51GO:0030170: pyridoxal phosphate binding2.20E-02
52GO:0005506: iron ion binding2.84E-02
53GO:0042802: identical protein binding3.05E-02
54GO:0008168: methyltransferase activity3.42E-02
55GO:0046872: metal ion binding3.65E-02
RankGO TermAdjusted P value
1GO:0016469: proton-transporting two-sector ATPase complex0.00E+00
2GO:0005747: mitochondrial respiratory chain complex I2.98E-13
3GO:0045271: respiratory chain complex I2.10E-06
4GO:0031966: mitochondrial membrane7.72E-05
5GO:0005758: mitochondrial intermembrane space1.14E-04
6GO:0016471: vacuolar proton-transporting V-type ATPase complex3.94E-04
7GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)3.94E-04
8GO:0033179: proton-transporting V-type ATPase, V0 domain3.94E-04
9GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane8.54E-04
10GO:0009501: amyloplast9.81E-04
11GO:0045273: respiratory chain complex II9.81E-04
12GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)9.81E-04
13GO:0005763: mitochondrial small ribosomal subunit1.25E-03
14GO:0005739: mitochondrion1.60E-03
15GO:0005789: endoplasmic reticulum membrane1.96E-03
16GO:0005829: cytosol2.31E-03
17GO:0005753: mitochondrial proton-transporting ATP synthase complex2.38E-03
18GO:0032580: Golgi cisterna membrane5.75E-03
19GO:0010319: stromule6.00E-03
20GO:0009536: plastid7.25E-03
21GO:0000325: plant-type vacuole8.65E-03
22GO:0005730: nucleolus1.09E-02
23GO:0005773: vacuole1.29E-02
24GO:0012505: endomembrane system1.71E-02
25GO:0009507: chloroplast3.14E-02
26GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.75E-02
27GO:0031969: chloroplast membrane4.09E-02
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Gene type



Gene DE type