GO Enrichment Analysis of Co-expressed Genes with
AT1G74370
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0000025: maltose catabolic process | 0.00E+00 |
| 4 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 5 | GO:0005983: starch catabolic process | 2.30E-06 |
| 6 | GO:0000023: maltose metabolic process | 8.43E-05 |
| 7 | GO:0005980: glycogen catabolic process | 8.43E-05 |
| 8 | GO:0009735: response to cytokinin | 1.62E-04 |
| 9 | GO:0005976: polysaccharide metabolic process | 2.00E-04 |
| 10 | GO:1901959: positive regulation of cutin biosynthetic process | 2.00E-04 |
| 11 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.00E-04 |
| 12 | GO:0071712: ER-associated misfolded protein catabolic process | 2.00E-04 |
| 13 | GO:0032527: protein exit from endoplasmic reticulum | 2.00E-04 |
| 14 | GO:0010623: programmed cell death involved in cell development | 3.35E-04 |
| 15 | GO:0032940: secretion by cell | 3.35E-04 |
| 16 | GO:1904278: positive regulation of wax biosynthetic process | 3.35E-04 |
| 17 | GO:0010731: protein glutathionylation | 4.84E-04 |
| 18 | GO:0006424: glutamyl-tRNA aminoacylation | 4.84E-04 |
| 19 | GO:0010037: response to carbon dioxide | 6.44E-04 |
| 20 | GO:0006808: regulation of nitrogen utilization | 6.44E-04 |
| 21 | GO:0015976: carbon utilization | 6.44E-04 |
| 22 | GO:0010600: regulation of auxin biosynthetic process | 6.44E-04 |
| 23 | GO:0045723: positive regulation of fatty acid biosynthetic process | 6.44E-04 |
| 24 | GO:0010508: positive regulation of autophagy | 6.44E-04 |
| 25 | GO:2000122: negative regulation of stomatal complex development | 6.44E-04 |
| 26 | GO:0030163: protein catabolic process | 7.08E-04 |
| 27 | GO:0032543: mitochondrial translation | 8.14E-04 |
| 28 | GO:0006461: protein complex assembly | 8.14E-04 |
| 29 | GO:0000470: maturation of LSU-rRNA | 9.94E-04 |
| 30 | GO:0006828: manganese ion transport | 9.94E-04 |
| 31 | GO:0009913: epidermal cell differentiation | 9.94E-04 |
| 32 | GO:0009817: defense response to fungus, incompatible interaction | 1.15E-03 |
| 33 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.18E-03 |
| 34 | GO:0009631: cold acclimation | 1.32E-03 |
| 35 | GO:0010161: red light signaling pathway | 1.39E-03 |
| 36 | GO:0009704: de-etiolation | 1.60E-03 |
| 37 | GO:0010928: regulation of auxin mediated signaling pathway | 1.60E-03 |
| 38 | GO:0008610: lipid biosynthetic process | 1.60E-03 |
| 39 | GO:0030091: protein repair | 1.60E-03 |
| 40 | GO:0009657: plastid organization | 1.83E-03 |
| 41 | GO:0006783: heme biosynthetic process | 2.06E-03 |
| 42 | GO:0010206: photosystem II repair | 2.06E-03 |
| 43 | GO:0015979: photosynthesis | 2.10E-03 |
| 44 | GO:0005982: starch metabolic process | 2.30E-03 |
| 45 | GO:0009638: phototropism | 2.30E-03 |
| 46 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.30E-03 |
| 47 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.56E-03 |
| 48 | GO:0006816: calcium ion transport | 2.82E-03 |
| 49 | GO:0009773: photosynthetic electron transport in photosystem I | 2.82E-03 |
| 50 | GO:0006629: lipid metabolic process | 2.90E-03 |
| 51 | GO:0006979: response to oxidative stress | 3.33E-03 |
| 52 | GO:0006006: glucose metabolic process | 3.37E-03 |
| 53 | GO:0010102: lateral root morphogenesis | 3.37E-03 |
| 54 | GO:0009785: blue light signaling pathway | 3.37E-03 |
| 55 | GO:0009887: animal organ morphogenesis | 3.66E-03 |
| 56 | GO:0009266: response to temperature stimulus | 3.66E-03 |
| 57 | GO:0010025: wax biosynthetic process | 4.26E-03 |
| 58 | GO:0051017: actin filament bundle assembly | 4.57E-03 |
| 59 | GO:0006289: nucleotide-excision repair | 4.57E-03 |
| 60 | GO:0007017: microtubule-based process | 4.89E-03 |
| 61 | GO:0009409: response to cold | 5.21E-03 |
| 62 | GO:0061077: chaperone-mediated protein folding | 5.22E-03 |
| 63 | GO:0010017: red or far-red light signaling pathway | 5.55E-03 |
| 64 | GO:0009686: gibberellin biosynthetic process | 5.89E-03 |
| 65 | GO:0010089: xylem development | 6.24E-03 |
| 66 | GO:0006284: base-excision repair | 6.24E-03 |
| 67 | GO:0042631: cellular response to water deprivation | 6.97E-03 |
| 68 | GO:0048825: cotyledon development | 8.10E-03 |
| 69 | GO:0000302: response to reactive oxygen species | 8.50E-03 |
| 70 | GO:0006310: DNA recombination | 9.72E-03 |
| 71 | GO:0006974: cellular response to DNA damage stimulus | 1.19E-02 |
| 72 | GO:0015995: chlorophyll biosynthetic process | 1.23E-02 |
| 73 | GO:0010119: regulation of stomatal movement | 1.47E-02 |
| 74 | GO:0034599: cellular response to oxidative stress | 1.62E-02 |
| 75 | GO:0006281: DNA repair | 1.71E-02 |
| 76 | GO:0006508: proteolysis | 1.80E-02 |
| 77 | GO:0051707: response to other organism | 1.88E-02 |
| 78 | GO:0008152: metabolic process | 1.89E-02 |
| 79 | GO:0000209: protein polyubiquitination | 1.93E-02 |
| 80 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.15E-02 |
| 81 | GO:0009585: red, far-red light phototransduction | 2.32E-02 |
| 82 | GO:0009740: gibberellic acid mediated signaling pathway | 2.86E-02 |
| 83 | GO:0009416: response to light stimulus | 3.04E-02 |
| 84 | GO:0009845: seed germination | 3.70E-02 |
| 85 | GO:0009737: response to abscisic acid | 3.79E-02 |
| 86 | GO:0042744: hydrogen peroxide catabolic process | 3.84E-02 |
| 87 | GO:0006412: translation | 3.90E-02 |
| 88 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.11E-02 |
| 89 | GO:0010150: leaf senescence | 4.40E-02 |
| 90 | GO:0045490: pectin catabolic process | 4.40E-02 |
| 91 | GO:0007623: circadian rhythm | 4.40E-02 |
| 92 | GO:0055114: oxidation-reduction process | 4.83E-02 |
| 93 | GO:0006470: protein dephosphorylation | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0004134: 4-alpha-glucanotransferase activity | 0.00E+00 |
| 5 | GO:0019203: carbohydrate phosphatase activity | 8.43E-05 |
| 6 | GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity | 8.43E-05 |
| 7 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 8.43E-05 |
| 8 | GO:0008184: glycogen phosphorylase activity | 8.43E-05 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 8.43E-05 |
| 10 | GO:0005534: galactose binding | 8.43E-05 |
| 11 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 8.43E-05 |
| 12 | GO:0004853: uroporphyrinogen decarboxylase activity | 8.43E-05 |
| 13 | GO:0004645: phosphorylase activity | 8.43E-05 |
| 14 | GO:0047372: acylglycerol lipase activity | 1.18E-04 |
| 15 | GO:0044390: ubiquitin-like protein conjugating enzyme binding | 2.00E-04 |
| 16 | GO:0010297: heteropolysaccharide binding | 2.00E-04 |
| 17 | GO:0018708: thiol S-methyltransferase activity | 2.00E-04 |
| 18 | GO:0017108: 5'-flap endonuclease activity | 3.35E-04 |
| 19 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 3.35E-04 |
| 20 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.35E-04 |
| 21 | GO:0017150: tRNA dihydrouridine synthase activity | 3.35E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.35E-04 |
| 23 | GO:0019843: rRNA binding | 5.30E-04 |
| 24 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 6.44E-04 |
| 25 | GO:0019104: DNA N-glycosylase activity | 6.44E-04 |
| 26 | GO:0003959: NADPH dehydrogenase activity | 8.14E-04 |
| 27 | GO:2001070: starch binding | 9.94E-04 |
| 28 | GO:0004130: cytochrome-c peroxidase activity | 9.94E-04 |
| 29 | GO:0004602: glutathione peroxidase activity | 1.18E-03 |
| 30 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.18E-03 |
| 31 | GO:0004620: phospholipase activity | 1.39E-03 |
| 32 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.06E-03 |
| 33 | GO:0005384: manganese ion transmembrane transporter activity | 2.30E-03 |
| 34 | GO:0044183: protein binding involved in protein folding | 2.82E-03 |
| 35 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 3.09E-03 |
| 36 | GO:0004089: carbonate dehydratase activity | 3.37E-03 |
| 37 | GO:0015095: magnesium ion transmembrane transporter activity | 3.37E-03 |
| 38 | GO:0004565: beta-galactosidase activity | 3.37E-03 |
| 39 | GO:0008266: poly(U) RNA binding | 3.66E-03 |
| 40 | GO:0004190: aspartic-type endopeptidase activity | 3.95E-03 |
| 41 | GO:0008289: lipid binding | 4.41E-03 |
| 42 | GO:0005528: FK506 binding | 4.57E-03 |
| 43 | GO:0004252: serine-type endopeptidase activity | 4.84E-03 |
| 44 | GO:0030570: pectate lyase activity | 5.89E-03 |
| 45 | GO:0001085: RNA polymerase II transcription factor binding | 7.34E-03 |
| 46 | GO:0048038: quinone binding | 8.50E-03 |
| 47 | GO:0004518: nuclease activity | 8.90E-03 |
| 48 | GO:0051015: actin filament binding | 9.30E-03 |
| 49 | GO:0003735: structural constituent of ribosome | 9.34E-03 |
| 50 | GO:0003684: damaged DNA binding | 9.72E-03 |
| 51 | GO:0005200: structural constituent of cytoskeleton | 1.01E-02 |
| 52 | GO:0008237: metallopeptidase activity | 1.01E-02 |
| 53 | GO:0030247: polysaccharide binding | 1.23E-02 |
| 54 | GO:0008236: serine-type peptidase activity | 1.28E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 1.42E-02 |
| 56 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.47E-02 |
| 57 | GO:0003924: GTPase activity | 1.71E-02 |
| 58 | GO:0004364: glutathione transferase activity | 1.83E-02 |
| 59 | GO:0016491: oxidoreductase activity | 2.08E-02 |
| 60 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.10E-02 |
| 61 | GO:0004842: ubiquitin-protein transferase activity | 2.21E-02 |
| 62 | GO:0031625: ubiquitin protein ligase binding | 2.50E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.68E-02 |
| 64 | GO:0016829: lyase activity | 3.70E-02 |
| 65 | GO:0016740: transferase activity | 3.70E-02 |
| 66 | GO:0030170: pyridoxal phosphate binding | 3.77E-02 |
| 67 | GO:0016787: hydrolase activity | 3.82E-02 |
| 68 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.84E-02 |
| 69 | GO:0005525: GTP binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033557: Slx1-Slx4 complex | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.21E-16 |
| 3 | GO:0009507: chloroplast | 2.30E-13 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 8.24E-12 |
| 5 | GO:0009941: chloroplast envelope | 9.86E-10 |
| 6 | GO:0009579: thylakoid | 3.13E-06 |
| 7 | GO:0009534: chloroplast thylakoid | 3.23E-06 |
| 8 | GO:0009533: chloroplast stromal thylakoid | 3.32E-05 |
| 9 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 8.43E-05 |
| 10 | GO:0030093: chloroplast photosystem I | 2.00E-04 |
| 11 | GO:0036513: Derlin-1 retrotranslocation complex | 4.84E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 5.30E-04 |
| 13 | GO:0009501: amyloplast | 1.60E-03 |
| 14 | GO:0031977: thylakoid lumen | 1.70E-03 |
| 15 | GO:0045298: tubulin complex | 2.06E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.06E-03 |
| 17 | GO:0000311: plastid large ribosomal subunit | 3.09E-03 |
| 18 | GO:0009508: plastid chromosome | 3.37E-03 |
| 19 | GO:0005840: ribosome | 3.54E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 3.66E-03 |
| 21 | GO:0015629: actin cytoskeleton | 5.89E-03 |
| 22 | GO:0009523: photosystem II | 8.10E-03 |
| 23 | GO:0010319: stromule | 1.01E-02 |
| 24 | GO:0009295: nucleoid | 1.01E-02 |
| 25 | GO:0031969: chloroplast membrane | 1.16E-02 |
| 26 | GO:0005667: transcription factor complex | 1.19E-02 |
| 27 | GO:0015934: large ribosomal subunit | 1.47E-02 |
| 28 | GO:0005856: cytoskeleton | 2.04E-02 |
| 29 | GO:0048046: apoplast | 2.31E-02 |
| 30 | GO:0010287: plastoglobule | 3.37E-02 |
| 31 | GO:0005773: vacuole | 4.01E-02 |
| 32 | GO:0031225: anchored component of membrane | 4.71E-02 |