GO Enrichment Analysis of Co-expressed Genes with
AT1G73660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 2 | GO:0009661: chromoplast organization | 0.00E+00 |
| 3 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 4 | GO:0009902: chloroplast relocation | 9.84E-08 |
| 5 | GO:0071483: cellular response to blue light | 2.25E-05 |
| 6 | GO:0010236: plastoquinone biosynthetic process | 3.65E-05 |
| 7 | GO:0016120: carotene biosynthetic process | 3.65E-05 |
| 8 | GO:0009903: chloroplast avoidance movement | 7.58E-05 |
| 9 | GO:0010100: negative regulation of photomorphogenesis | 1.62E-04 |
| 10 | GO:0046467: membrane lipid biosynthetic process | 1.71E-04 |
| 11 | GO:0071461: cellular response to redox state | 1.71E-04 |
| 12 | GO:0006430: lysyl-tRNA aminoacylation | 1.71E-04 |
| 13 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 1.71E-04 |
| 14 | GO:0010362: negative regulation of anion channel activity by blue light | 1.71E-04 |
| 15 | GO:1902265: abscisic acid homeostasis | 1.71E-04 |
| 16 | GO:0080005: photosystem stoichiometry adjustment | 3.87E-04 |
| 17 | GO:0007154: cell communication | 3.87E-04 |
| 18 | GO:0000256: allantoin catabolic process | 3.87E-04 |
| 19 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.87E-04 |
| 20 | GO:0080183: response to photooxidative stress | 3.87E-04 |
| 21 | GO:0043100: pyrimidine nucleobase salvage | 3.87E-04 |
| 22 | GO:0042754: negative regulation of circadian rhythm | 3.87E-04 |
| 23 | GO:0006898: receptor-mediated endocytosis | 3.87E-04 |
| 24 | GO:0005986: sucrose biosynthetic process | 4.24E-04 |
| 25 | GO:0007623: circadian rhythm | 4.28E-04 |
| 26 | GO:0010136: ureide catabolic process | 6.32E-04 |
| 27 | GO:1901562: response to paraquat | 6.32E-04 |
| 28 | GO:0071836: nectar secretion | 6.32E-04 |
| 29 | GO:0044375: regulation of peroxisome size | 6.32E-04 |
| 30 | GO:0016570: histone modification | 6.32E-04 |
| 31 | GO:0031022: nuclear migration along microfilament | 6.32E-04 |
| 32 | GO:0019419: sulfate reduction | 6.32E-04 |
| 33 | GO:0008299: isoprenoid biosynthetic process | 7.27E-04 |
| 34 | GO:0009658: chloroplast organization | 8.35E-04 |
| 35 | GO:2001141: regulation of RNA biosynthetic process | 9.04E-04 |
| 36 | GO:0010371: regulation of gibberellin biosynthetic process | 9.04E-04 |
| 37 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.04E-04 |
| 38 | GO:0006145: purine nucleobase catabolic process | 9.04E-04 |
| 39 | GO:0010148: transpiration | 9.04E-04 |
| 40 | GO:0055114: oxidation-reduction process | 1.05E-03 |
| 41 | GO:0071585: detoxification of cadmium ion | 1.20E-03 |
| 42 | GO:0010021: amylopectin biosynthetic process | 1.20E-03 |
| 43 | GO:0045454: cell redox homeostasis | 1.51E-03 |
| 44 | GO:0009904: chloroplast accumulation movement | 1.52E-03 |
| 45 | GO:0010190: cytochrome b6f complex assembly | 1.87E-03 |
| 46 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.87E-03 |
| 47 | GO:0006555: methionine metabolic process | 1.87E-03 |
| 48 | GO:0071805: potassium ion transmembrane transport | 2.01E-03 |
| 49 | GO:0010189: vitamin E biosynthetic process | 2.24E-03 |
| 50 | GO:0009648: photoperiodism | 2.24E-03 |
| 51 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.24E-03 |
| 52 | GO:0070370: cellular heat acclimation | 2.64E-03 |
| 53 | GO:0006368: transcription elongation from RNA polymerase II promoter | 2.64E-03 |
| 54 | GO:0015995: chlorophyll biosynthetic process | 2.65E-03 |
| 55 | GO:0018298: protein-chromophore linkage | 2.94E-03 |
| 56 | GO:0030091: protein repair | 3.06E-03 |
| 57 | GO:0050821: protein stabilization | 3.06E-03 |
| 58 | GO:0009231: riboflavin biosynthetic process | 3.06E-03 |
| 59 | GO:0006102: isocitrate metabolic process | 3.06E-03 |
| 60 | GO:0016559: peroxisome fission | 3.06E-03 |
| 61 | GO:0048564: photosystem I assembly | 3.06E-03 |
| 62 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.06E-03 |
| 63 | GO:0071482: cellular response to light stimulus | 3.50E-03 |
| 64 | GO:0015996: chlorophyll catabolic process | 3.50E-03 |
| 65 | GO:0048574: long-day photoperiodism, flowering | 3.50E-03 |
| 66 | GO:0009637: response to blue light | 3.71E-03 |
| 67 | GO:0034599: cellular response to oxidative stress | 3.88E-03 |
| 68 | GO:0009821: alkaloid biosynthetic process | 3.95E-03 |
| 69 | GO:0034765: regulation of ion transmembrane transport | 3.95E-03 |
| 70 | GO:0009638: phototropism | 4.44E-03 |
| 71 | GO:0000103: sulfate assimilation | 4.93E-03 |
| 72 | GO:0051555: flavonol biosynthetic process | 4.93E-03 |
| 73 | GO:0009970: cellular response to sulfate starvation | 4.93E-03 |
| 74 | GO:0006995: cellular response to nitrogen starvation | 4.93E-03 |
| 75 | GO:0006352: DNA-templated transcription, initiation | 5.45E-03 |
| 76 | GO:0000272: polysaccharide catabolic process | 5.45E-03 |
| 77 | GO:0016485: protein processing | 5.45E-03 |
| 78 | GO:0008285: negative regulation of cell proliferation | 5.45E-03 |
| 79 | GO:0030048: actin filament-based movement | 6.54E-03 |
| 80 | GO:0009767: photosynthetic electron transport chain | 6.54E-03 |
| 81 | GO:0010207: photosystem II assembly | 7.11E-03 |
| 82 | GO:0007015: actin filament organization | 7.11E-03 |
| 83 | GO:0009909: regulation of flower development | 7.12E-03 |
| 84 | GO:0007031: peroxisome organization | 7.69E-03 |
| 85 | GO:0006071: glycerol metabolic process | 8.30E-03 |
| 86 | GO:0051017: actin filament bundle assembly | 8.92E-03 |
| 87 | GO:0019344: cysteine biosynthetic process | 8.92E-03 |
| 88 | GO:0009624: response to nematode | 9.16E-03 |
| 89 | GO:0006508: proteolysis | 9.42E-03 |
| 90 | GO:0010073: meristem maintenance | 9.56E-03 |
| 91 | GO:0006418: tRNA aminoacylation for protein translation | 9.56E-03 |
| 92 | GO:0016226: iron-sulfur cluster assembly | 1.09E-02 |
| 93 | GO:0009753: response to jasmonic acid | 1.09E-02 |
| 94 | GO:0040007: growth | 1.16E-02 |
| 95 | GO:0010227: floral organ abscission | 1.16E-02 |
| 96 | GO:0009693: ethylene biosynthetic process | 1.16E-02 |
| 97 | GO:0009058: biosynthetic process | 1.21E-02 |
| 98 | GO:0006817: phosphate ion transport | 1.23E-02 |
| 99 | GO:0016117: carotenoid biosynthetic process | 1.30E-02 |
| 100 | GO:0042391: regulation of membrane potential | 1.37E-02 |
| 101 | GO:0010118: stomatal movement | 1.37E-02 |
| 102 | GO:0042631: cellular response to water deprivation | 1.37E-02 |
| 103 | GO:0006520: cellular amino acid metabolic process | 1.45E-02 |
| 104 | GO:0006662: glycerol ether metabolic process | 1.45E-02 |
| 105 | GO:0009741: response to brassinosteroid | 1.45E-02 |
| 106 | GO:0042752: regulation of circadian rhythm | 1.52E-02 |
| 107 | GO:0019252: starch biosynthetic process | 1.60E-02 |
| 108 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.68E-02 |
| 109 | GO:0009739: response to gibberellin | 1.78E-02 |
| 110 | GO:0030163: protein catabolic process | 1.84E-02 |
| 111 | GO:0006464: cellular protein modification process | 1.93E-02 |
| 112 | GO:0009567: double fertilization forming a zygote and endosperm | 1.93E-02 |
| 113 | GO:0016126: sterol biosynthetic process | 2.18E-02 |
| 114 | GO:0035556: intracellular signal transduction | 2.21E-02 |
| 115 | GO:0010029: regulation of seed germination | 2.27E-02 |
| 116 | GO:0042128: nitrate assimilation | 2.36E-02 |
| 117 | GO:0010411: xyloglucan metabolic process | 2.45E-02 |
| 118 | GO:0048481: plant ovule development | 2.64E-02 |
| 119 | GO:0008219: cell death | 2.64E-02 |
| 120 | GO:0000160: phosphorelay signal transduction system | 2.73E-02 |
| 121 | GO:0006811: ion transport | 2.83E-02 |
| 122 | GO:0009723: response to ethylene | 2.85E-02 |
| 123 | GO:0010043: response to zinc ion | 2.93E-02 |
| 124 | GO:0007568: aging | 2.93E-02 |
| 125 | GO:0006865: amino acid transport | 3.02E-02 |
| 126 | GO:0080167: response to karrikin | 3.05E-02 |
| 127 | GO:0006099: tricarboxylic acid cycle | 3.22E-02 |
| 128 | GO:0044550: secondary metabolite biosynthetic process | 3.32E-02 |
| 129 | GO:0015979: photosynthesis | 3.48E-02 |
| 130 | GO:0042542: response to hydrogen peroxide | 3.64E-02 |
| 131 | GO:0009640: photomorphogenesis | 3.74E-02 |
| 132 | GO:0042538: hyperosmotic salinity response | 4.40E-02 |
| 133 | GO:0009751: response to salicylic acid | 4.43E-02 |
| 134 | GO:0009408: response to heat | 4.49E-02 |
| 135 | GO:0006813: potassium ion transport | 4.62E-02 |
| 136 | GO:0009585: red, far-red light phototransduction | 4.62E-02 |
| 137 | GO:0010224: response to UV-B | 4.74E-02 |
| 138 | GO:0006857: oligopeptide transport | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 2 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 3 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 4 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 5 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 6 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0050347: trans-octaprenyltranstransferase activity | 1.41E-06 |
| 9 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.41E-06 |
| 10 | GO:0004180: carboxypeptidase activity | 5.25E-06 |
| 11 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 1.21E-05 |
| 12 | GO:0042802: identical protein binding | 8.49E-05 |
| 13 | GO:0016783: sulfurtransferase activity | 1.71E-04 |
| 14 | GO:0004328: formamidase activity | 1.71E-04 |
| 15 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.71E-04 |
| 16 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 1.71E-04 |
| 17 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.71E-04 |
| 18 | GO:0004824: lysine-tRNA ligase activity | 1.71E-04 |
| 19 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 1.71E-04 |
| 20 | GO:0008237: metallopeptidase activity | 1.86E-04 |
| 21 | GO:0000989: transcription factor activity, transcription factor binding | 1.98E-04 |
| 22 | GO:0009973: adenylyl-sulfate reductase activity | 3.87E-04 |
| 23 | GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding | 3.87E-04 |
| 24 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 3.87E-04 |
| 25 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 3.87E-04 |
| 26 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 3.87E-04 |
| 27 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 3.87E-04 |
| 28 | GO:0033201: alpha-1,4-glucan synthase activity | 3.87E-04 |
| 29 | GO:0015173: aromatic amino acid transmembrane transporter activity | 3.87E-04 |
| 30 | GO:0004046: aminoacylase activity | 3.87E-04 |
| 31 | GO:0003935: GTP cyclohydrolase II activity | 6.32E-04 |
| 32 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 6.32E-04 |
| 33 | GO:0050307: sucrose-phosphate phosphatase activity | 6.32E-04 |
| 34 | GO:0004096: catalase activity | 6.32E-04 |
| 35 | GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding | 6.32E-04 |
| 36 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 6.32E-04 |
| 37 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.32E-04 |
| 38 | GO:0046524: sucrose-phosphate synthase activity | 6.32E-04 |
| 39 | GO:0004373: glycogen (starch) synthase activity | 6.32E-04 |
| 40 | GO:0003913: DNA photolyase activity | 6.32E-04 |
| 41 | GO:0032947: protein complex scaffold | 6.32E-04 |
| 42 | GO:0004848: ureidoglycolate hydrolase activity | 6.32E-04 |
| 43 | GO:0004557: alpha-galactosidase activity | 6.32E-04 |
| 44 | GO:0004176: ATP-dependent peptidase activity | 7.97E-04 |
| 45 | GO:0004792: thiosulfate sulfurtransferase activity | 9.04E-04 |
| 46 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.04E-04 |
| 47 | GO:0009882: blue light photoreceptor activity | 9.04E-04 |
| 48 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 9.04E-04 |
| 49 | GO:0000254: C-4 methylsterol oxidase activity | 9.04E-04 |
| 50 | GO:0015175: neutral amino acid transmembrane transporter activity | 9.04E-04 |
| 51 | GO:0009011: starch synthase activity | 1.20E-03 |
| 52 | GO:0001053: plastid sigma factor activity | 1.20E-03 |
| 53 | GO:0016987: sigma factor activity | 1.20E-03 |
| 54 | GO:0010181: FMN binding | 1.37E-03 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.78E-03 |
| 56 | GO:0016491: oxidoreductase activity | 1.78E-03 |
| 57 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.87E-03 |
| 58 | GO:0000293: ferric-chelate reductase activity | 1.87E-03 |
| 59 | GO:0016157: sucrose synthase activity | 2.24E-03 |
| 60 | GO:0005242: inward rectifier potassium channel activity | 2.24E-03 |
| 61 | GO:0016161: beta-amylase activity | 2.24E-03 |
| 62 | GO:0009881: photoreceptor activity | 2.64E-03 |
| 63 | GO:0008236: serine-type peptidase activity | 2.80E-03 |
| 64 | GO:0030674: protein binding, bridging | 3.06E-03 |
| 65 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 3.06E-03 |
| 66 | GO:0004222: metalloendopeptidase activity | 3.23E-03 |
| 67 | GO:0005506: iron ion binding | 3.83E-03 |
| 68 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.95E-03 |
| 69 | GO:0016887: ATPase activity | 4.03E-03 |
| 70 | GO:0016844: strictosidine synthase activity | 4.44E-03 |
| 71 | GO:0015293: symporter activity | 5.37E-03 |
| 72 | GO:0019904: protein domain specific binding | 5.45E-03 |
| 73 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.54E-03 |
| 74 | GO:0031072: heat shock protein binding | 6.54E-03 |
| 75 | GO:0000155: phosphorelay sensor kinase activity | 6.54E-03 |
| 76 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.54E-03 |
| 77 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.11E-03 |
| 78 | GO:0004672: protein kinase activity | 7.70E-03 |
| 79 | GO:0051536: iron-sulfur cluster binding | 8.92E-03 |
| 80 | GO:0015035: protein disulfide oxidoreductase activity | 9.44E-03 |
| 81 | GO:0015079: potassium ion transmembrane transporter activity | 9.56E-03 |
| 82 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.18E-02 |
| 83 | GO:0047134: protein-disulfide reductase activity | 1.30E-02 |
| 84 | GO:0004812: aminoacyl-tRNA ligase activity | 1.30E-02 |
| 85 | GO:0005249: voltage-gated potassium channel activity | 1.37E-02 |
| 86 | GO:0030551: cyclic nucleotide binding | 1.37E-02 |
| 87 | GO:0004527: exonuclease activity | 1.45E-02 |
| 88 | GO:0008080: N-acetyltransferase activity | 1.45E-02 |
| 89 | GO:0004791: thioredoxin-disulfide reductase activity | 1.52E-02 |
| 90 | GO:0048038: quinone binding | 1.68E-02 |
| 91 | GO:0016791: phosphatase activity | 1.93E-02 |
| 92 | GO:0008483: transaminase activity | 2.01E-02 |
| 93 | GO:0016413: O-acetyltransferase activity | 2.10E-02 |
| 94 | GO:0000287: magnesium ion binding | 2.42E-02 |
| 95 | GO:0030247: polysaccharide binding | 2.45E-02 |
| 96 | GO:0004721: phosphoprotein phosphatase activity | 2.45E-02 |
| 97 | GO:0050897: cobalt ion binding | 2.93E-02 |
| 98 | GO:0030145: manganese ion binding | 2.93E-02 |
| 99 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.12E-02 |
| 100 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.94E-02 |
| 101 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.96E-02 |
| 102 | GO:0005198: structural molecule activity | 4.06E-02 |
| 103 | GO:0051287: NAD binding | 4.29E-02 |
| 104 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.62E-02 |
| 105 | GO:0015171: amino acid transmembrane transporter activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031313: extrinsic component of endosome membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.58E-10 |
| 3 | GO:0031234: extrinsic component of cytoplasmic side of plasma membrane | 1.71E-04 |
| 4 | GO:0005777: peroxisome | 3.31E-04 |
| 5 | GO:0045254: pyruvate dehydrogenase complex | 3.87E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 4.63E-04 |
| 7 | GO:0031969: chloroplast membrane | 1.15E-03 |
| 8 | GO:0009526: plastid envelope | 1.20E-03 |
| 9 | GO:0016593: Cdc73/Paf1 complex | 1.20E-03 |
| 10 | GO:0031982: vesicle | 3.06E-03 |
| 11 | GO:0009501: amyloplast | 3.06E-03 |
| 12 | GO:0009514: glyoxysome | 3.50E-03 |
| 13 | GO:0005779: integral component of peroxisomal membrane | 3.50E-03 |
| 14 | GO:0005884: actin filament | 5.45E-03 |
| 15 | GO:0009536: plastid | 5.63E-03 |
| 16 | GO:0009706: chloroplast inner membrane | 9.16E-03 |
| 17 | GO:0042651: thylakoid membrane | 9.56E-03 |
| 18 | GO:0009532: plastid stroma | 1.02E-02 |
| 19 | GO:0010287: plastoglobule | 1.09E-02 |
| 20 | GO:0005778: peroxisomal membrane | 2.01E-02 |
| 21 | GO:0010319: stromule | 2.01E-02 |
| 22 | GO:0005739: mitochondrion | 3.35E-02 |
| 23 | GO:0031977: thylakoid lumen | 3.53E-02 |
| 24 | GO:0009570: chloroplast stroma | 3.94E-02 |